RNA–Protein interactions for RNA: ENST00000639658.1

POLR2B-213, Transcript of RNA polymerase II subunit B, humanhuman

TSL 5 BASIC

Gene POLR2B, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-213ENST00000639658 SEC16AO15027 2179 aa4.13□□□□□ -1.75
POLR2B-213ENST00000639658 IGHV3-64DA0A0J9YX35 117 aa4.13□□□□□ -1.75
POLR2B-213ENST00000639658 NDUFA12Q9UI09 145 aa4.13□□□□□ -1.75
POLR2B-213ENST00000639658 CABIN1Q9Y6J0 2220 aa4.12□□□□□ -1.75
POLR2B-213ENST00000639658 PRR9Q5T870 116 aa4.12□□□□□ -1.75
POLR2B-213ENST00000639658 STHQ8IWL8 128 aa4.12□□□□□ -1.75
POLR2B-213ENST00000639658 LINC00308Q8TCZ7 52 aa4.12□□□□□ -1.75
POLR2B-213ENST00000639658 BRK1Q8WUW1 75 aa4.12□□□□□ -1.75
POLR2B-213ENST00000639658 KLK15Q9H2R5 256 aa4.12□□□□□ -1.75
POLR2B-213ENST00000639658 KLLNB2CW77 178 aa4.12□□□□□ -1.75
POLR2B-213ENST00000639658 CCL3L1P16619 93 aa4.12□□□□□ -1.75
POLR2B-213ENST00000639658 Q6ZS52 159 aa4.12□□□□□ -1.75
POLR2B-213ENST00000639658 NAV3Q8IVL0 2385 aa4.12□□□□□ -1.75
POLR2B-213ENST00000639658 H0YGX0 51 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 M0QY20 66 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 HIST2H2BCQ6DN03 193 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 HIST2H2BDQ6DRA6 164 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 TM2D3Q9BRN9 247 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 PRSS2P07478 247 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 RPL39P62891 51 aaKnown RBP4.11□□□□□ -1.75
POLR2B-213ENST00000639658 PMS2CLQ68D20 193 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 VMO1Q7Z5L0 202 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 LINC00846Q9NV44 126 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 CACNA1GO43497 2377 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 FAM223AQ8IWN6 122 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 LY6G5BQ8NDX9 201 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 PHLDA3Q9Y5J5 127 aa4.11□□□□□ -1.75
POLR2B-213ENST00000639658 IGHV3-21A0A0B4J1V1 117 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 H7C2G1 150 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 LINC01565O15544 149 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 NDUFB3O43676 98 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 Q1T7F1 81 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 WFDC11Q8NEX6 87 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 M0R1W7 72 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 DNAL4O96015 105 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 CIRBPQ14011 172 aaKnown RBP4.1□□□□□ -1.75
POLR2B-213ENST00000639658 PRSS33Q8NF86 280 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 DNAH14Q0VDD8 3507 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 ODF3BA8MYP8 253 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 GHRHP01286 108 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 FAM218AQ96MZ4 157 aa4.1□□□□□ -1.75
POLR2B-213ENST00000639658 TRANK1O15050 2925 aa4.09□□□□□ -1.75
POLR2B-213ENST00000639658 A0A0J9YXV3 536 aa4.09□□□□□ -1.75
POLR2B-213ENST00000639658 LY6G6DO95868 133 aa4.09□□□□□ -1.75
POLR2B-213ENST00000639658 ZNF625Q96I27 306 aaPredicted RBP4.09□□□□□ -1.75
POLR2B-213ENST00000639658 DOCK10Q96BY6 2186 aa4.09□□□□□ -1.75
POLR2B-213ENST00000639658 JMJD7-PLA2G4BH0Y9G9 81 aa4.09□□□□□ -1.76
POLR2B-213ENST00000639658 SPRY3O43610 288 aa4.09□□□□□ -1.76
POLR2B-213ENST00000639658 SAA4P35542 130 aa4.09□□□□□ -1.76
POLR2B-213ENST00000639658 SS18Q15532 418 aa4.09□□□□□ -1.76
POLR2B-213ENST00000639658 HES7Q9BYE0 225 aa4.09□□□□□ -1.76
POLR2B-213ENST00000639658 LYRM9A8MSI8 78 aa4.08□□□□□ -1.76
POLR2B-213ENST00000639658 ADORA2A-AS1P86434 159 aa4.08□□□□□ -1.76
POLR2B-213ENST00000639658 CD164L2Q6UWJ8 174 aa4.08□□□□□ -1.76
POLR2B-213ENST00000639658 RETNQ9HD89 108 aa4.08□□□□□ -1.76
POLR2B-213ENST00000639658 USP34Q70CQ2 3546 aa4.08□□□□□ -1.76
POLR2B-213ENST00000639658 TRBV12-3P01733 135 aa4.08□□□□□ -1.76
POLR2B-213ENST00000639658 BRCA2P51587 3418 aa4.08□□□□□ -1.76
POLR2B-213ENST00000639658 CACNA1DQ01668 2161 aa4.08□□□□□ -1.76
POLR2B-213ENST00000639658 C9orf106Q8NAJ2 232 aa4.08□□□□□ -1.76
POLR2B-213ENST00000639658 TRBV7-4A0A0J9YYF1 115 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 CCL4P13236 92 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 BLCAPP62952 87 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 CXCL6P80162 114 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 C19orf54Q5BKX5 351 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 DOCK7Q96N67 2140 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 ESM1Q9NQ30 184 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 PI4KAP42356 2102 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 ASCC3Q8N3C0 2202 aaKnown RBP4.07□□□□□ -1.76
POLR2B-213ENST00000639658 LOC110117498A0A087WWA1 95 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 PAX4O43316 350 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 MGPP08493 103 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 SOSTDC1Q6X4U4 206 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 Q6ZSV7 163 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 C20orf197Q8N268 126 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 LINC01560Q8TB33 94 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 ZNF580Q9UK33 172 aa4.07□□□□□ -1.76
POLR2B-213ENST00000639658 M0R1B8 84 aa4.06□□□□□ -1.76
POLR2B-213ENST00000639658 MRPL55Q7Z7F7 128 aaKnown RBP4.06□□□□□ -1.76
POLR2B-213ENST00000639658 OPRPNQ99935 248 aaPredicted RBP4.06□□□□□ -1.76
POLR2B-213ENST00000639658 ZNF576Q9H609 170 aa4.06□□□□□ -1.76
POLR2B-213ENST00000639658 CHD9Q3L8U1 2897 aa4.06□□□□□ -1.76
POLR2B-213ENST00000639658 MALRD1Q5VYJ5 2156 aa4.06□□□□□ -1.76
POLR2B-213ENST00000639658 H3BQ85 93 aa4.06□□□□□ -1.76
POLR2B-213ENST00000639658 SNRPD3P62318 126 aaKnown RBP4.06□□□□□ -1.76
POLR2B-213ENST00000639658 Q8NA96 180 aa4.06□□□□□ -1.76
POLR2B-213ENST00000639658 PRRC2AP48634 2157 aaKnown RBP4.06□□□□□ -1.76
POLR2B-213ENST00000639658 IGHV3-16A0A0C4DH30 117 aa4.06□□□□□ -1.76
POLR2B-213ENST00000639658 S100A4P26447 101 aaKnown RBP4.06□□□□□ -1.76
POLR2B-213ENST00000639658 ESRGQ1W209 222 aa4.06□□□□□ -1.76
POLR2B-213ENST00000639658 A0A087WVE0 104 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 CHCHD7Q9BUK0 85 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 Q9UF83 564 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 MUC4Q99102 2169 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 MYO7AQ13402 2215 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 MIFP14174 115 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 PHF5AQ7RTV0 110 aaKnown RBP4.05□□□□□ -1.76
POLR2B-213ENST00000639658 LINC00474Q9P2X8 69 aa4.05□□□□□ -1.76
POLR2B-213ENST00000639658 ASXL3Q9C0F0 2248 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms