RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 TSPOP30536 169 aa8.98□□□□□ -0.97
CTSD-208ENST00000636843 IFI27P40305 119 aaPredicted RBP8.98□□□□□ -0.97
CTSD-208ENST00000636843 FOXI2Q6ZQN5 318 aa8.98□□□□□ -0.97
CTSD-208ENST00000636843 Q6ZQT7 251 aa8.98□□□□□ -0.97
CTSD-208ENST00000636843 CLUHP3Q96NS8 147 aa8.98□□□□□ -0.97
CTSD-208ENST00000636843 MAP1LC3CQ9BXW4 147 aa8.98□□□□□ -0.97
CTSD-208ENST00000636843 PKHD1P08F94 4074 aa8.98□□□□□ -0.97
CTSD-208ENST00000636843 C7orf71A4D174 169 aa8.97□□□□□ -0.97
CTSD-208ENST00000636843 LGALS9BQ3B8N2 356 aa8.97□□□□□ -0.97
CTSD-208ENST00000636843 PET117Q6UWS5 81 aa8.97□□□□□ -0.97
CTSD-208ENST00000636843 FAM159AQ6UWV7 190 aa8.97□□□□□ -0.97
CTSD-208ENST00000636843 NXT2Q9NPJ8 142 aaKnown RBP8.97□□□□□ -0.97
CTSD-208ENST00000636843 SCRT2Q9NQ03 307 aa8.97□□□□□ -0.97
CTSD-208ENST00000636843 PAM16Q9Y3D7 125 aa8.97□□□□□ -0.97
CTSD-208ENST00000636843 LOC389332A0A1B0GUA5 103 aa8.96□□□□□ -0.97
CTSD-208ENST00000636843 LINC01546A6NGU7 62 aa8.96□□□□□ -0.97
CTSD-208ENST00000636843 PRSS29PA6NIE9 313 aa8.96□□□□□ -0.97
CTSD-208ENST00000636843 SMKR1H3BMG3 65 aa8.96□□□□□ -0.97
CTSD-208ENST00000636843 SYS1-DBNDD2H3BUS1 97 aa8.96□□□□□ -0.97
CTSD-208ENST00000636843 EVI2AP22794 236 aa8.96□□□□□ -0.97
CTSD-208ENST00000636843 TDRG1Q3Y452 100 aa8.96□□□□□ -0.97
CTSD-208ENST00000636843 MRAP2Q96G30 205 aa8.96□□□□□ -0.97
CTSD-208ENST00000636843 PHLDA3Q9Y5J5 127 aa8.96□□□□□ -0.97
CTSD-208ENST00000636843 PRSS47A8MTI9 375 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 M0R2N4 97 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 RTL8CO15255 209 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 TNFRSF6BO95407 300 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 NCR2O95944 276 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 IGKV3-20P01619 116 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 EMP1P54849 157 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 C14orf144Q96I85 54 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 IGHV3OR16-12A0A075B7B8 117 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 HBDP02042 147 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 CDKN1BP46527 198 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 FXYD7P58549 80 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 KIR3DS1Q14943 382 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 SPATA45Q537H7 98 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 MIEN1Q9BRT3 115 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 DPH3P1Q9H4G8 78 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 DKK2Q9UBU2 259 aa8.95□□□□□ -0.98
CTSD-208ENST00000636843 TRAV9-2A0A087WT02 112 aa8.94□□□□□ -0.98
CTSD-208ENST00000636843 GNRH2O43555 120 aa8.94□□□□□ -0.98
CTSD-208ENST00000636843 NXPH4O95158 308 aa8.94□□□□□ -0.98
CTSD-208ENST00000636843 RNASE3P12724 160 aaKnown RBP8.94□□□□□ -0.98
CTSD-208ENST00000636843 LINC00173Q6ZV60 143 aa8.94□□□□□ -0.98
CTSD-208ENST00000636843 SPATA12Q7Z6I5 190 aa8.94□□□□□ -0.98
CTSD-208ENST00000636843 UBE2DNLQ8IWF7 75 aa8.94□□□□□ -0.98
CTSD-208ENST00000636843 GOLT1BQ9Y3E0 138 aa8.94□□□□□ -0.98
CTSD-208ENST00000636843 TIMM8BQ9Y5J9 83 aaPredicted RBP8.94□□□□□ -0.98
CTSD-208ENST00000636843 DYNC1H1Q14204 4646 aaKnown RBP8.94□□□□□ -0.98
CTSD-208ENST00000636843 A0A096LNJ9 63 aa8.93□□□□□ -0.98
CTSD-208ENST00000636843 TRAV12-3A0A0B4J271 114 aa8.93□□□□□ -0.98
CTSD-208ENST00000636843 A8MTW9 85 aa8.93□□□□□ -0.98
CTSD-208ENST00000636843 M0R381 172 aa8.93□□□□□ -0.98
CTSD-208ENST00000636843 LBHQ53QV2 105 aaPredicted RBP8.93□□□□□ -0.98
CTSD-208ENST00000636843 FAM222AQ5U5X8 452 aa8.93□□□□□ -0.98
CTSD-208ENST00000636843 Q8N8P6 123 aa8.93□□□□□ -0.98
CTSD-208ENST00000636843 AP1S3Q96PC3 154 aa8.93□□□□□ -0.98
CTSD-208ENST00000636843 DNAH11Q96DT5 4516 aa8.93□□□□□ -0.98
CTSD-208ENST00000636843 Q6ZR54 194 aa8.92□□□□□ -0.98
CTSD-208ENST00000636843 MRPL52Q86TS9 123 aaKnown RBP8.92□□□□□ -0.98
CTSD-208ENST00000636843 NRACQ8N912 160 aa8.92□□□□□ -0.98
CTSD-208ENST00000636843 RYR1P21817 5038 aa8.91□□□□□ -0.98
CTSD-208ENST00000636843 PPP1R17O96001 155 aa8.91□□□□□ -0.98
CTSD-208ENST00000636843 FCER1GP30273 86 aa8.91□□□□□ -0.98
CTSD-208ENST00000636843 LINC01545Q5VT33 79 aa8.91□□□□□ -0.98
CTSD-208ENST00000636843 AMTNQ6UX39 209 aa8.91□□□□□ -0.98
CTSD-208ENST00000636843 C1orf158Q8N1D5 194 aa8.91□□□□□ -0.98
CTSD-208ENST00000636843 UQCR10Q9UDW1 63 aa8.91□□□□□ -0.98
CTSD-208ENST00000636843 MUC4Q99102 2169 aa8.91□□□□□ -0.98
CTSD-208ENST00000636843 IGLV2-18A0A075B6J9 118 aa8.9□□□□□ -0.98
CTSD-208ENST00000636843 IGHV1OR15-1A0A075B7D0 117 aa8.9□□□□□ -0.98
CTSD-208ENST00000636843 GAS8-AS1O95177 125 aa8.9□□□□□ -0.98
CTSD-208ENST00000636843 HTN3P15516 51 aa8.9□□□□□ -0.98
CTSD-208ENST00000636843 GATA1P15976 413 aaPredicted RBP8.9□□□□□ -0.98
CTSD-208ENST00000636843 SPINK13Q1W4C9 94 aa8.9□□□□□ -0.98
CTSD-208ENST00000636843 RRN3P1Q2M238 152 aa8.9□□□□□ -0.98
CTSD-208ENST00000636843 ATOH7Q8N100 152 aa8.9□□□□□ -0.98
CTSD-208ENST00000636843 IGHV3-16A0A0C4DH30 117 aa8.9□□□□□ -0.99
CTSD-208ENST00000636843 SMIM17P0DL12 118 aa8.9□□□□□ -0.99
CTSD-208ENST00000636843 IGLC3P0DOY3 106 aa8.9□□□□□ -0.99
CTSD-208ENST00000636843 DAD1P61803 113 aa8.9□□□□□ -0.99
CTSD-208ENST00000636843 SYT8Q8NBV8 401 aa8.9□□□□□ -0.99
CTSD-208ENST00000636843 C9orf85Q96MD7 179 aa8.9□□□□□ -0.99
CTSD-208ENST00000636843 C20orf78Q9BR46 151 aa8.9□□□□□ -0.99
CTSD-208ENST00000636843 PKD1P98161 4303 aa8.89□□□□□ -0.99
CTSD-208ENST00000636843 TRGV11A0A075B6L2 103 aa8.89□□□□□ -0.99
CTSD-208ENST00000636843 TRAV12-2A0A075B6T6 113 aa8.89□□□□□ -0.99
CTSD-208ENST00000636843 TRAV26-2A0A0B4J265 109 aa8.89□□□□□ -0.99
CTSD-208ENST00000636843 HSBP1L1C9JCN9 74 aa8.89□□□□□ -0.99
CTSD-208ENST00000636843 K7EMI3 77 aa8.89□□□□□ -0.99
CTSD-208ENST00000636843 C14orf178Q8N769 122 aaPredicted RBP8.89□□□□□ -0.99
CTSD-208ENST00000636843 C15orf53Q8NAA6 179 aa8.89□□□□□ -0.99
CTSD-208ENST00000636843 IFI27L1Q96BM0 104 aa8.89□□□□□ -0.99
CTSD-208ENST00000636843 ST20Q9HBF5 79 aa8.89□□□□□ -0.99
CTSD-208ENST00000636843 M0R143 59 aa8.88□□□□□ -0.99
CTSD-208ENST00000636843 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
CTSD-208ENST00000636843 TMEM208Q9BTX3 173 aa8.88□□□□□ -0.99
CTSD-208ENST00000636843 SMIM2Q9BVW6 85 aa8.88□□□□□ -0.99
CTSD-208ENST00000636843 KIF25-AS1Q9Y6Z4 181 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms