RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 TRAV8-2A0A0B4J237 113 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 GAGE12JA6NER3 117 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 LINC01546A6NGU7 62 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 DLEU1O43261 78 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 STPG4Q8N801 248 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 SLC50A1Q9BRV3 221 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 TMEM208Q9BTX3 173 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 PRAC2D3DTV9 90 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 D6R8Y8 96 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 MRPL51Q4U2R6 128 aaKnown RBP3.51□□□□□ -1.85
LINC00550-201ENST00000629293 AMN1Q8IY45 258 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 FER1L6-AS1Q8NA97 138 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 MAP1LC3CQ9BXW4 147 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 TMEM191AQ9H0A3 160 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 TMSB15BA0A087X1C1 80 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 ZNF25P17030 456 aaPredicted RBP3.51□□□□□ -1.85
LINC00550-201ENST00000629293 ORMDL3Q8N138 153 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 OR10AG1Q8NH19 301 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 RNF185Q96GF1 192 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 SCRT2Q9NQ03 307 aa3.51□□□□□ -1.85
LINC00550-201ENST00000629293 hDV102S1A0JD36 115 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 M0R2N4 97 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 G0S2P27469 103 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 IFI27P40305 119 aaPredicted RBP3.5□□□□□ -1.85
LINC00550-201ENST00000629293 ERCC8Q13216 396 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 BATFQ16520 125 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 FA2HQ7L5A8 372 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 GPHB5Q86YW7 130 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 C11orf45Q8TAV5 145 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 PRELID3AQ96N28 172 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 TPPP3Q9BW30 176 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 KRTAP4-9Q9BYQ8 210 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 MS4A6AQ9H2W1 248 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 IGHV3-66A0A0C4DH42 116 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 NCR2O95944 276 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 KRTAP10-2P60368 255 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 SEC61BP60468 96 aaKnown RBP3.5□□□□□ -1.85
LINC00550-201ENST00000629293 RNF182Q8N6D2 247 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 OR11H2Q8NH07 326 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 UFC1Q9Y3C8 167 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 DNAH10Q8IVF4 4471 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 FABP5P3A8MUU1 101 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 LGALS9O00182 355 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 NPYP01303 97 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 HIST1H1AQ02539 215 aaPredicted RBP3.5□□□□□ -1.85
LINC00550-201ENST00000629293 ZNF415Q09FC8 603 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 C9orf47Q6ZRZ4 202 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 PRSS3P2Q8NHM4 247 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 METTL26Q96S19 204 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 TP73-AS1Q9UF72 201 aa3.5□□□□□ -1.85
LINC00550-201ENST00000629293 DMBT1Q9UGM3 2413 aaPredicted RBP3.49□□□□□ -1.85
LINC00550-201ENST00000629293 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
LINC00550-201ENST00000629293 IGKV3D-20A0A0C4DH25 116 aa3.49□□□□□ -1.85
LINC00550-201ENST00000629293 ORAOV1Q8WV07 137 aa3.49□□□□□ -1.85
LINC00550-201ENST00000629293 SPAG8Q99932 426 aaPredicted RBP3.49□□□□□ -1.85
LINC00550-201ENST00000629293 AGPAT4-IT1Q9H0P7 198 aa3.49□□□□□ -1.85
LINC00550-201ENST00000629293 DAZ1Q9NQZ3 744 aaKnown RBP3.49□□□□□ -1.85
LINC00550-201ENST00000629293 IGHV4-28A0A0C4DH34 117 aa3.49□□□□□ -1.85
LINC00550-201ENST00000629293 IGHV7-4-1A0A0J9YVY3 117 aa3.49□□□□□ -1.85
LINC00550-201ENST00000629293 SOCS3O14543 225 aa3.49□□□□□ -1.85
LINC00550-201ENST00000629293 LGALS9BQ3B8N2 356 aa3.49□□□□□ -1.85
LINC00550-201ENST00000629293 LGALS9CQ6DKI2 356 aa3.49□□□□□ -1.85
LINC00550-201ENST00000629293 CSTL1Q9H114 145 aa3.49□□□□□ -1.85
LINC00550-201ENST00000629293 IGHV4-4A0A075B6R2 117 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 MUC21A0A0G2JKD1 596 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 MUC21A0A140T8X8 626 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 SMKR1H3BMG3 65 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 HBDP02042 147 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 PPBPP02775 128 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 HINT1P49773 126 aaPredicted RBP3.48□□□□□ -1.85
LINC00550-201ENST00000629293 TWIST1Q15672 202 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 MUC21Q5SSG8 566 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 SLC25A34Q6PIV7 304 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 GOLT1BQ9Y3E0 138 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 HSBP1L1C9JCN9 74 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 SNAI2O43623 268 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 ORM1P02763 201 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 COX8AP10176 69 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 FGF6P10767 208 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 CKS2P33552 79 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 C2orf91Q6ZV80 131 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 RHPN1-AS1Q9BWJ2 59 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 LENEPQ9Y5L5 61 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 COX11Q9Y6N1 276 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 IGLV2-18A0A075B6J9 118 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 LOC389332A0A1B0GUA5 103 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 NDUFA4O00483 81 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 GAS8-AS1O95177 125 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 BVES-AS1Q5T3Y7 98 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 SUMO4Q6EEV6 95 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 PMCHL2Q9BQD1 86 aa3.48□□□□□ -1.85
LINC00550-201ENST00000629293 VPS13DQ5THJ4 4388 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 TRAV25A0A0B4J276 109 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 EMP1P54849 157 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 DEFB131AP59861 70 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 TMEM78Q5T7P6 136 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 PRR9Q5T870 116 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 FAM19A4Q96LR4 140 aa3.47□□□□□ -1.85
LINC00550-201ENST00000629293 KRTAP9-8Q9BYQ0 159 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms