RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 FLNBO75369 2602 aaKnown RBP8.34□□□□□ -1.07
VARS2-213ENST00000625423 TSPEAR-AS2P59090 65 aa8.34□□□□□ -1.07
VARS2-213ENST00000625423 ETDBQ3ZM63 59 aa8.34□□□□□ -1.07
VARS2-213ENST00000625423 GAGE13Q4V321 117 aa8.34□□□□□ -1.07
VARS2-213ENST00000625423 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
VARS2-213ENST00000625423 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
VARS2-213ENST00000625423 A6NJY4 79 aa8.34□□□□□ -1.07
VARS2-213ENST00000625423 GATA3P23771 443 aa8.34□□□□□ -1.07
VARS2-213ENST00000625423 A0A0J9YY99 117 aa8.33□□□□□ -1.08
VARS2-213ENST00000625423 ZNF876PQ49A33 203 aa8.33□□□□□ -1.08
VARS2-213ENST00000625423 UBE2D1P51668 147 aa8.33□□□□□ -1.08
VARS2-213ENST00000625423 PRO0461Q9UI25 63 aa8.33□□□□□ -1.08
VARS2-213ENST00000625423 APOMO95445 188 aa8.32□□□□□ -1.08
VARS2-213ENST00000625423 HIST2H2BCQ6DN03 193 aa8.32□□□□□ -1.08
VARS2-213ENST00000625423 LINC01356Q8N9X3 169 aa8.32□□□□□ -1.08
VARS2-213ENST00000625423 ZANQ9Y493 2812 aa8.32□□□□□ -1.08
VARS2-213ENST00000625423 TRPT1Q86TN4 253 aaKnown RBP8.32□□□□□ -1.08
VARS2-213ENST00000625423 TMEM89A2RUT3 159 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 TGFAP01135 160 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 P0DMU3 169 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 FAM231AP0DMU4 169 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 FAM231CP0DMU5 169 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 TSPAN13O95857 204 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 DSCR9P59020 149 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 LOC107984156A0A0G2JMH3 177 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 HTN1P15515 57 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 HOXD3P31249 432 aaPredicted RBP8.31□□□□□ -1.08
VARS2-213ENST00000625423 NSUN5P1Q3KNT7 163 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 ARL17AQ8IVW1 177 aa8.31□□□□□ -1.08
VARS2-213ENST00000625423 SPAG8Q99932 426 aaPredicted RBP8.31□□□□□ -1.08
VARS2-213ENST00000625423 J3QQQ9 107 aa8.3□□□□□ -1.08
VARS2-213ENST00000625423 TSSC4Q9Y5U2 329 aaPredicted RBP8.3□□□□□ -1.08
VARS2-213ENST00000625423 RHOHQ15669 191 aa8.3□□□□□ -1.08
VARS2-213ENST00000625423 IGHV3-30P01768 117 aa8.3□□□□□ -1.08
VARS2-213ENST00000625423 RBMY1A1P0DJD3 496 aaKnown RBP8.3□□□□□ -1.08
VARS2-213ENST00000625423 RBMY1CP0DJD4 496 aa8.3□□□□□ -1.08
VARS2-213ENST00000625423 IGHV3-30-5P0DP03 117 aa8.3□□□□□ -1.08
VARS2-213ENST00000625423 RBMY1FQ15415 496 aaKnown RBP8.3□□□□□ -1.08
VARS2-213ENST00000625423 AMELXQ99217 191 aa8.3□□□□□ -1.08
VARS2-213ENST00000625423 IGHV3-73A0A0B4J1V6 119 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 KNCNA6PVL3 124 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 PSMB2P49721 201 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 INSL3P51460 131 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 NDUFA11Q86Y39 141 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 SLC25A29Q8N8R3 303 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 C20orf203Q8NBC4 194 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 TMEM238C9JI98 176 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 I3L3M4 83 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 J3QR89 54 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
VARS2-213ENST00000625423 NFE4Q86UQ8 179 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 DLX4Q92988 240 aaPredicted RBP8.29□□□□□ -1.08
VARS2-213ENST00000625423 GTSF1LQ9H1H1 148 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 VPREB3Q9UKI3 123 aa8.29□□□□□ -1.08
VARS2-213ENST00000625423 IGHV3-64A0A075B6Q5 118 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 A0A096LNT2 108 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 TCTEX1D4Q5JR98 221 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 TRGV11A0A075B6L2 103 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 ELANEP08246 267 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 CFC1BP0CG36 223 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 CFC1P0CG37 223 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 KRTAP10-9P60411 292 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 ZNF702PQ9H963 129 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 GAGE12HA6NDE8 117 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 PRM2P04554 102 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 DEFB136Q30KP8 78 aa8.28□□□□□ -1.08
VARS2-213ENST00000625423 BEX4Q9NWD9 120 aaPredicted RBP8.28□□□□□ -1.08
VARS2-213ENST00000625423 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 PROK1P58294 105 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 CFAP126Q5VTH2 177 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 C18orf65Q6ZTR6 163 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 UBE2E2Q96LR5 201 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 AZU1P20160 251 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 SMCPP49901 116 aaPredicted RBP8.27□□□□□ -1.09
VARS2-213ENST00000625423 SLURP1P55000 103 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 UBE2D3P61077 147 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 UBE2D2P62837 147 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 IGLV4-3A0A075B6K6 122 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 A0A0J9YXV3 536 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 J3QLI3 93 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 ZNF22P17026 224 aaPredicted RBP8.27□□□□□ -1.09
VARS2-213ENST00000625423 DEFB131AP59861 70 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 SIGMAR1Q99720 223 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 VCX2Q9H322 139 aa8.27□□□□□ -1.09
VARS2-213ENST00000625423 LEPROTO15243 131 aa8.26□□□□□ -1.09
VARS2-213ENST00000625423 SMAGPQ0VAQ4 97 aa8.26□□□□□ -1.09
VARS2-213ENST00000625423 FBN2P35556 2912 aa8.26□□□□□ -1.09
VARS2-213ENST00000625423 RHODO00212 210 aa8.26□□□□□ -1.09
VARS2-213ENST00000625423 Q6YL49 198 aa8.26□□□□□ -1.09
VARS2-213ENST00000625423 RNF152Q8N8N0 203 aa8.26□□□□□ -1.09
VARS2-213ENST00000625423 ZNF418Q8TF45 676 aaPredicted RBP8.26□□□□□ -1.09
VARS2-213ENST00000625423 Q5PR19 223 aa8.25□□□□□ -1.09
VARS2-213ENST00000625423 MXRA5Q9NR99 2828 aa8.25□□□□□ -1.09
VARS2-213ENST00000625423 C10orf126Q8N4M7 172 aa8.25□□□□□ -1.09
VARS2-213ENST00000625423 TEX15Q9BXT5 2789 aa8.25□□□□□ -1.09
VARS2-213ENST00000625423 JMJD1CQ15652 2540 aa8.24□□□□□ -1.09
VARS2-213ENST00000625423 TCL1BO95988 128 aa8.24□□□□□ -1.09
VARS2-213ENST00000625423 CEMP1Q6PRD7 247 aaPredicted RBP8.24□□□□□ -1.09
VARS2-213ENST00000625423 Q9UF83 564 aa8.24□□□□□ -1.09
VARS2-213ENST00000625423 TRAV2A0A0B4J234 112 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms