RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MUSTN1Q8IVN3 82 aa14.49□□□□□ -0.09
PDLIM3-212ENST00000620787 C20orf203Q8NBC4 194 aa14.49□□□□□ -0.09
PDLIM3-212ENST00000620787 TRAV12-2A0A075B6T6 113 aa14.49□□□□□ -0.09
PDLIM3-212ENST00000620787 Q8N1Y9 231 aa14.49□□□□□ -0.09
PDLIM3-212ENST00000620787 ODF3Q96PU9 254 aa14.49□□□□□ -0.09
PDLIM3-212ENST00000620787 ERG28Q9UKR5 140 aa14.49□□□□□ -0.09
PDLIM3-212ENST00000620787 IGF2RP11717 2491 aa14.49□□□□□ -0.09
PDLIM3-212ENST00000620787 A0A0J9YXV3 536 aa14.48□□□□□ -0.09
PDLIM3-212ENST00000620787 CFHR3Q02985 330 aa14.48□□□□□ -0.09
PDLIM3-212ENST00000620787 IGLV4-3A0A075B6K6 122 aa14.47□□□□□ -0.09
PDLIM3-212ENST00000620787 A0A0J9YX75 114 aa14.47□□□□□ -0.09
PDLIM3-212ENST00000620787 Q5PR19 223 aa14.47□□□□□ -0.09
PDLIM3-212ENST00000620787 H7C2G1 150 aa14.47□□□□□ -0.09
PDLIM3-212ENST00000620787 M0R2P5 195 aa14.47□□□□□ -0.09
PDLIM3-212ENST00000620787 ZNF580Q9UK33 172 aa14.47□□□□□ -0.09
PDLIM3-212ENST00000620787 TMEM262E9PQX1 116 aa14.46□□□□□ -0.09
PDLIM3-212ENST00000620787 IGKV3-20P01619 116 aa14.46□□□□□ -0.09
PDLIM3-212ENST00000620787 IGHV4-61A0A0C4DH41 118 aa14.46□□□□□ -0.1
PDLIM3-212ENST00000620787 ELANEP08246 267 aa14.46□□□□□ -0.1
PDLIM3-212ENST00000620787 VPS13CQ709C8 3753 aa14.45□□□□□ -0.1
PDLIM3-212ENST00000620787 I3L3M4 83 aa14.45□□□□□ -0.1
PDLIM3-212ENST00000620787 IGHV1OR15-1A0A075B7D0 117 aa14.45□□□□□ -0.1
PDLIM3-212ENST00000620787 A0A0J9YXY3 114 aa14.45□□□□□ -0.1
PDLIM3-212ENST00000620787 UCNP55089 124 aa14.45□□□□□ -0.1
PDLIM3-212ENST00000620787 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.44□□□□□ -0.1
PDLIM3-212ENST00000620787 RNF183Q96D59 192 aa14.44□□□□□ -0.1
PDLIM3-212ENST00000620787 CITED1Q99966 193 aa14.44□□□□□ -0.1
PDLIM3-212ENST00000620787 C19orf84I3L1E1 186 aa14.43□□□□□ -0.1
PDLIM3-212ENST00000620787 SPINK13Q1W4C9 94 aa14.42□□□□□ -0.1
PDLIM3-212ENST00000620787 FAM104AQ969W3 186 aa14.42□□□□□ -0.1
PDLIM3-212ENST00000620787 LITAFQ99732 161 aa14.42□□□□□ -0.1
PDLIM3-212ENST00000620787 IGHV3-30-3P0DP02 117 aa14.41□□□□□ -0.1
PDLIM3-212ENST00000620787 ATXN8Q156A1 80 aa14.41□□□□□ -0.1
PDLIM3-212ENST00000620787 Q1RN00 199 aa14.41□□□□□ -0.1
PDLIM3-212ENST00000620787 TMEM95Q3KNT9 176 aa14.41□□□□□ -0.1
PDLIM3-212ENST00000620787 LINC01620Q4KN68 170 aa14.41□□□□□ -0.1
PDLIM3-212ENST00000620787 ZFAND6Q6FIF0 208 aa14.41□□□□□ -0.1
PDLIM3-212ENST00000620787 LINC01600Q96MT4 127 aa14.41□□□□□ -0.1
PDLIM3-212ENST00000620787 PRRC2AP48634 2157 aaKnown RBP14.41□□□□□ -0.1
PDLIM3-212ENST00000620787 K7EQG2 157 aa14.4□□□□□ -0.1
PDLIM3-212ENST00000620787 NTN5Q8WTR8 489 aaPredicted RBP14.4□□□□□ -0.1
PDLIM3-212ENST00000620787 ADARB2-AS1A8MUL3 147 aa14.4□□□□□ -0.1
PDLIM3-212ENST00000620787 SNRPD3P62318 126 aaKnown RBP14.4□□□□□ -0.1
PDLIM3-212ENST00000620787 PIMREGQ9BSJ6 248 aa14.4□□□□□ -0.1
PDLIM3-212ENST00000620787 SPXQ9BT56 116 aa14.39□□□□□ -0.11
PDLIM3-212ENST00000620787 TRBV30A0A0K0K1B3 111 aa14.39□□□□□ -0.11
PDLIM3-212ENST00000620787 TRIAP1O43715 76 aa14.39□□□□□ -0.11
PDLIM3-212ENST00000620787 TIMM21Q9BVV7 248 aa14.39□□□□□ -0.11
PDLIM3-212ENST00000620787 GATA3P23771 443 aa14.38□□□□□ -0.11
PDLIM3-212ENST00000620787 PSMB8P28062 276 aa14.38□□□□□ -0.11
PDLIM3-212ENST00000620787 TEX29Q8N6K0 151 aa14.38□□□□□ -0.11
PDLIM3-212ENST00000620787 ANAPC13Q9BS18 74 aa14.38□□□□□ -0.11
PDLIM3-212ENST00000620787 PYGO1Q9Y3Y4 419 aa14.38□□□□□ -0.11
PDLIM3-212ENST00000620787 CD28P10747 220 aa14.38□□□□□ -0.11
PDLIM3-212ENST00000620787 MRPS36P82909 103 aaKnown RBP14.38□□□□□ -0.11
PDLIM3-212ENST00000620787 DOPEY2Q9Y3R5 2298 aa14.37□□□□□ -0.11
PDLIM3-212ENST00000620787 TRAV8-3A0A0A6YYJ7 113 aa14.37□□□□□ -0.11
PDLIM3-212ENST00000620787 C10orf99Q6UWK7 81 aa14.37□□□□□ -0.11
PDLIM3-212ENST00000620787 C10orf105Q8TEF2 133 aa14.37□□□□□ -0.11
PDLIM3-212ENST00000620787 BEX4Q9NWD9 120 aaPredicted RBP14.37□□□□□ -0.11
PDLIM3-212ENST00000620787 EDA2RQ9HAV5 297 aa14.36□□□□□ -0.11
PDLIM3-212ENST00000620787 TRBV10-2A0A0K0K1G8 114 aa14.36□□□□□ -0.11
PDLIM3-212ENST00000620787 RPL13AP40429 203 aaKnown RBP14.36□□□□□ -0.11
PDLIM3-212ENST00000620787 TRGV11A0A075B6L2 103 aa14.35□□□□□ -0.11
PDLIM3-212ENST00000620787 ADAMTSL4-AS1Q5T5F5 129 aa14.35□□□□□ -0.11
PDLIM3-212ENST00000620787 CEMP1Q6PRD7 247 aaPredicted RBP14.35□□□□□ -0.11
PDLIM3-212ENST00000620787 TEX49A0A1B0GTD5 131 aa14.34□□□□□ -0.11
PDLIM3-212ENST00000620787 SPANXDQ9BXN6 97 aa14.34□□□□□ -0.11
PDLIM3-212ENST00000620787 SPANXCQ9NY87 97 aa14.34□□□□□ -0.11
PDLIM3-212ENST00000620787 NACAE9PAV3 2078 aa14.34□□□□□ -0.11
PDLIM3-212ENST00000620787 RBMY1A1P0DJD3 496 aaKnown RBP14.34□□□□□ -0.11
PDLIM3-212ENST00000620787 RBMY1CP0DJD4 496 aa14.34□□□□□ -0.11
PDLIM3-212ENST00000620787 RBMY1FQ15415 496 aaKnown RBP14.34□□□□□ -0.11
PDLIM3-212ENST00000620787 RNF152Q8N8N0 203 aa14.34□□□□□ -0.11
PDLIM3-212ENST00000620787 IGHV3-73A0A0B4J1V6 119 aa14.33□□□□□ -0.11
PDLIM3-212ENST00000620787 IGHV1-58A0A0C4DH39 117 aa14.33□□□□□ -0.11
PDLIM3-212ENST00000620787 PROK1P58294 105 aa14.33□□□□□ -0.11
PDLIM3-212ENST00000620787 CRLF1O75462 422 aa14.33□□□□□ -0.12
PDLIM3-212ENST00000620787 NHLRC4P0CG21 123 aaPredicted RBP14.33□□□□□ -0.12
PDLIM3-212ENST00000620787 RNASE13Q5GAN3 156 aaKnown RBP14.33□□□□□ -0.12
PDLIM3-212ENST00000620787 ICOSQ9Y6W8 199 aa14.33□□□□□ -0.12
PDLIM3-212ENST00000620787 TRAV4A0A0B4J268 109 aa14.32□□□□□ -0.12
PDLIM3-212ENST00000620787 PRSS2P07478 247 aa14.32□□□□□ -0.12
PDLIM3-212ENST00000620787 NDUFA12Q9UI09 145 aa14.32□□□□□ -0.12
PDLIM3-212ENST00000620787 COL12A1Q99715 3063 aa14.32□□□□□ -0.12
PDLIM3-212ENST00000620787 SORL1Q92673 2214 aa14.32□□□□□ -0.12
PDLIM3-212ENST00000620787 AVPP01185 164 aa14.32□□□□□ -0.12
PDLIM3-212ENST00000620787 SNCGO76070 127 aa14.31□□□□□ -0.12
PDLIM3-212ENST00000620787 IGHV4-30-2A0A087WSY4 118 aa14.31□□□□□ -0.12
PDLIM3-212ENST00000620787 H3BMM0 161 aa14.31□□□□□ -0.12
PDLIM3-212ENST00000620787 MSMBP08118 114 aa14.31□□□□□ -0.12
PDLIM3-212ENST00000620787 MIAQ16674 131 aa14.31□□□□□ -0.12
PDLIM3-212ENST00000620787 UBE2WQ96B02 151 aa14.31□□□□□ -0.12
PDLIM3-212ENST00000620787 VSIG2Q96IQ7 327 aa14.31□□□□□ -0.12
PDLIM3-212ENST00000620787 SYNJ2BPP57105 145 aa14.3□□□□□ -0.12
PDLIM3-212ENST00000620787 GAGE2BQ13066 116 aa14.3□□□□□ -0.12
PDLIM3-212ENST00000620787 LY6DQ14210 128 aa14.3□□□□□ -0.12
PDLIM3-212ENST00000620787 GAGE2EQ4V326 116 aa14.3□□□□□ -0.12
PDLIM3-212ENST00000620787 GAGE2DQ9UEU5 116 aa14.3□□□□□ -0.12
PDLIM3-212ENST00000620787 TRAV8-4A0A0B4J246 113 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms