RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 TRAV8-1A0A0A6YYK1 113 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 A0A0J9YX75 114 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 A8MTW9 85 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 D6R8Y8 96 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 K7ERU9 68 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 M0R3E3 92 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 ORM1P02763 201 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 NPSP0C0P6 89 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 EVI2AP22794 236 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 CDKN1BP46527 198 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 HINT1P49773 126 aaPredicted RBP3.81□□□□□ -1.8
SHMT1-211ENST00000618902 ZNF138P52744 262 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 FXYD7P58549 80 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 HSD52Q0P140 79 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 MRPL51Q4U2R6 128 aaKnown RBP3.81□□□□□ -1.8
SHMT1-211ENST00000618902 MPV17L2Q567V2 206 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 PAPPA-AS1Q5QFB9 102 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 AMTNQ6UX39 209 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 Q8N8P6 123 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 OR5A1Q8NGJ0 315 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 C16orf92Q96LL3 132 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 SGK494Q96LW2 274 aa3.81□□□□□ -1.8
SHMT1-211ENST00000618902 DNAH10Q8IVF4 4471 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 TRAV12-1A0A0B4J245 112 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 C9orf118A6NHY6 69 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 CCL25O15444 150 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 SNAI2O43623 268 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 DUSP14O95147 198 aaKnown RBP3.8□□□□□ -1.8
SHMT1-211ENST00000618902 IGKV3-20P01619 116 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 PLNP26678 52 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 IFI27P40305 119 aaPredicted RBP3.8□□□□□ -1.8
SHMT1-211ENST00000618902 RPL32P62910 135 aaKnown RBP3.8□□□□□ -1.8
SHMT1-211ENST00000618902 DEFB135Q30KP9 77 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 ORMDL2Q53FV1 153 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 CSNK1G2-AS1Q8NCQ2 148 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 HYDINQ4G0P3 5121 aa3.8□□□□□ -1.8
SHMT1-211ENST00000618902 FRAS1Q86XX4 4008 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 TRAV21A0A0B4J279 112 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 GAGE10A6NGK3 116 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 M0R381 172 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 TAX1BP3O14907 124 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 TNFRSF6BO95407 300 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 PRM2P04554 102 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 PRSS1P07477 247 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 SMIM13P0DJ93 91 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 RBMY1A1P0DJD3 496 aaKnown RBP3.79□□□□□ -1.8
SHMT1-211ENST00000618902 RBMY1CP0DJD4 496 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 SMIM17P0DL12 118 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 ERCC8Q13216 396 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 LAGE3Q14657 143 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 RBMY1FQ15415 496 aaKnown RBP3.79□□□□□ -1.8
SHMT1-211ENST00000618902 ATOH7Q8N100 152 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 OR8A1Q8NGG7 326 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 OR11H2Q8NH07 326 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 C8orf49Q96NF6 230 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 VGLL1Q99990 258 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 XCL2Q9UBD3 114 aa3.79□□□□□ -1.8
SHMT1-211ENST00000618902 DNAH2Q9P225 4427 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 IGKV2-40A0A087WW87 121 aaPredicted RBP3.78□□□□□ -1.8
SHMT1-211ENST00000618902 LCE6AA0A183 80 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 hDV102S1A0JD36 115 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 GAGE12BA1L429 117 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.78□□□□□ -1.8
SHMT1-211ENST00000618902 H7C1H1 209 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 J3QR89 54 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 EIF4EBP3O60516 100 aaPredicted RBP3.78□□□□□ -1.8
SHMT1-211ENST00000618902 DPM2O94777 84 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 IGKV2D-40P01614 121 aaPredicted RBP3.78□□□□□ -1.8
SHMT1-211ENST00000618902 IGKCP01834 107 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 LEPP41159 167 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 MAJINQ3KP22 176 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 PRR9Q5T870 116 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 CEMP1Q6PRD7 247 aaPredicted RBP3.78□□□□□ -1.8
SHMT1-211ENST00000618902 Q6ZQT7 251 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 C1orf158Q8N1D5 194 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 OR10J6PQ8NGY7 276 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 C11orf45Q8TAV5 145 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 ODF3Q96PU9 254 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 TPPP3Q9BW30 176 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 TM2D2Q9BX73 214 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 AGPAT4-IT1Q9H0P7 198 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 X6R8D5 127 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 HECTD4Q9Y4D8 3996 aa3.78□□□□□ -1.8
SHMT1-211ENST00000618902 TRAV12-2A0A075B6T6 113 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 A0A087WX48 190 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 A0A096LNJ9 63 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 A0A0J9YWU9 116 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 LOC389332A0A1B0GUA5 103 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 F8W1H4 67 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 FGF6P10767 208 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 FABP2P12104 132 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 C21orf62-AS1Q17RA5 79 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 SPINK13Q1W4C9 94 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 SPANXN1Q5VSR9 72 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 POM121L12Q8N7R1 296 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 Q8NAQ8 132 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 RNF185Q96GF1 192 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 FAM19A4Q96LR4 140 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 DPH3P1Q9H4G8 78 aa3.77□□□□□ -1.81
SHMT1-211ENST00000618902 HHLA3Q9XRX5 114 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms