RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 SPXQ9BT56 116 aa11.22□□□□□ -0.61
SRRT-217ENST00000618411 ADARB2-AS1A8MUL3 147 aa11.21□□□□□ -0.61
SRRT-217ENST00000618411 I3L3M4 83 aa11.21□□□□□ -0.61
SRRT-217ENST00000618411 NDUFA4O00483 81 aa11.21□□□□□ -0.61
SRRT-217ENST00000618411 UNQ9165/PRO28630Q6UXU0 137 aa11.21□□□□□ -0.61
SRRT-217ENST00000618411 PPDPFQ9H3Y8 114 aa11.21□□□□□ -0.61
SRRT-217ENST00000618411 YAE1D1Q9NRH1 226 aa11.21□□□□□ -0.61
SRRT-217ENST00000618411 CSMD1Q96PZ7 3565 aa11.21□□□□□ -0.62
SRRT-217ENST00000618411 FAM236AA0A1B0GUQ0 79 aa11.21□□□□□ -0.62
SRRT-217ENST00000618411 FAM236BA0A1B0GV22 79 aa11.21□□□□□ -0.62
SRRT-217ENST00000618411 FAM74A4Q5TZK3 123 aa11.21□□□□□ -0.62
SRRT-217ENST00000618411 PRRC2AP48634 2157 aaKnown RBP11.2□□□□□ -0.62
SRRT-217ENST00000618411 TMEM61Q8N0U2 210 aa11.2□□□□□ -0.62
SRRT-217ENST00000618411 CACNA1HO95180 2353 aa11.2□□□□□ -0.62
SRRT-217ENST00000618411 SIRPDQ9H106 197 aa11.2□□□□□ -0.62
SRRT-217ENST00000618411 PIEZO2Q9H5I5 2752 aa11.19□□□□□ -0.62
SRRT-217ENST00000618411 RPL11P62913 178 aaKnown RBP11.19□□□□□ -0.62
SRRT-217ENST00000618411 MRPS36P82909 103 aaKnown RBP11.19□□□□□ -0.62
SRRT-217ENST00000618411 C3orf56Q8N813 242 aa11.19□□□□□ -0.62
SRRT-217ENST00000618411 LINC01560Q8TB33 94 aa11.19□□□□□ -0.62
SRRT-217ENST00000618411 DNAJC30Q96LL9 226 aa11.19□□□□□ -0.62
SRRT-217ENST00000618411 NDUFA12Q9UI09 145 aa11.19□□□□□ -0.62
SRRT-217ENST00000618411 IGHV1-58A0A0C4DH39 117 aa11.19□□□□□ -0.62
SRRT-217ENST00000618411 C9orf85Q96MD7 179 aa11.18□□□□□ -0.62
SRRT-217ENST00000618411 PYGO1Q9Y3Y4 419 aa11.18□□□□□ -0.62
SRRT-217ENST00000618411 C3orf22Q8N5N4 141 aa11.18□□□□□ -0.62
SRRT-217ENST00000618411 NRGNQ92686 78 aa11.18□□□□□ -0.62
SRRT-217ENST00000618411 TRAV8-3A0A0A6YYJ7 113 aa11.17□□□□□ -0.62
SRRT-217ENST00000618411 TRAV41A0A0B4J266 112 aa11.17□□□□□ -0.62
SRRT-217ENST00000618411 ZFP36P26651 326 aaKnown RBP11.17□□□□□ -0.62
SRRT-217ENST00000618411 Q6ZSV7 163 aa11.17□□□□□ -0.62
SRRT-217ENST00000618411 UQCRQO14949 82 aa11.17□□□□□ -0.62
SRRT-217ENST00000618411 ATP5G1P05496 136 aa11.17□□□□□ -0.62
SRRT-217ENST00000618411 C9orf153Q5TBE3 101 aa11.17□□□□□ -0.62
SRRT-217ENST00000618411 LINC00643Q86TS7 51 aa11.17□□□□□ -0.62
SRRT-217ENST00000618411 C5orf56Q8N8D9 126 aa11.17□□□□□ -0.62
SRRT-217ENST00000618411 IGHV3-16A0A0C4DH30 117 aa11.16□□□□□ -0.62
SRRT-217ENST00000618411 NDUFA7O95182 113 aa11.16□□□□□ -0.62
SRRT-217ENST00000618411 C19orf54Q5BKX5 351 aa11.16□□□□□ -0.62
SRRT-217ENST00000618411 MGAQ8IWI9 3026 aa11.16□□□□□ -0.62
SRRT-217ENST00000618411 TRAV12-3A0A0B4J271 114 aa11.16□□□□□ -0.62
SRRT-217ENST00000618411 TIMM17BO60830 172 aa11.16□□□□□ -0.62
SRRT-217ENST00000618411 VSIG2Q96IQ7 327 aa11.16□□□□□ -0.62
SRRT-217ENST00000618411 TRBV12-3P01733 135 aa11.15□□□□□ -0.62
SRRT-217ENST00000618411 SAA4P35542 130 aa11.15□□□□□ -0.62
SRRT-217ENST00000618411 DCANP1Q8TF63 244 aa11.15□□□□□ -0.62
SRRT-217ENST00000618411 LINC00694P0DN24 101 aa11.15□□□□□ -0.62
SRRT-217ENST00000618411 CD28P10747 220 aa11.15□□□□□ -0.62
SRRT-217ENST00000618411 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
SRRT-217ENST00000618411 LINC00526Q96FQ7 95 aa11.14□□□□□ -0.63
SRRT-217ENST00000618411 IGKV3-7A0A075B6H7 116 aa11.14□□□□□ -0.63
SRRT-217ENST00000618411 Q8NA96 180 aa11.14□□□□□ -0.63
SRRT-217ENST00000618411 FAM104AQ969W3 186 aa11.14□□□□□ -0.63
SRRT-217ENST00000618411 RHPN1-AS1Q9BWJ2 59 aa11.14□□□□□ -0.63
SRRT-217ENST00000618411 SDIM1Q6ZPB5 146 aa11.13□□□□□ -0.63
SRRT-217ENST00000618411 NPC2P61916 151 aa11.13□□□□□ -0.63
SRRT-217ENST00000618411 TINCRA0A1B0GVN0 87 aa11.12□□□□□ -0.63
SRRT-217ENST00000618411 LINC00527Q9UJ94 153 aa11.12□□□□□ -0.63
SRRT-217ENST00000618411 DCHS2Q6V1P9 2916 aa11.12□□□□□ -0.63
SRRT-217ENST00000618411 ANKHD1Q8IWZ3 2542 aaKnown RBP11.12□□□□□ -0.63
SRRT-217ENST00000618411 ID1P41134 155 aa11.12□□□□□ -0.63
SRRT-217ENST00000618411 SMCR5Q8TEV8 140 aa11.12□□□□□ -0.63
SRRT-217ENST00000618411 NPFFO15130 113 aa11.11□□□□□ -0.63
SRRT-217ENST00000618411 CXCL5P42830 114 aa11.11□□□□□ -0.63
SRRT-217ENST00000618411 CSDC2Q9Y534 153 aaKnown RBP11.11□□□□□ -0.63
SRRT-217ENST00000618411 SPTBN2O15020 2390 aa11.11□□□□□ -0.63
SRRT-217ENST00000618411 HERVK_113P63121 156 aa11.11□□□□□ -0.63
SRRT-217ENST00000618411 LRRC75A-AS1Q8N1F1 130 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 CITED2Q99967 270 aaPredicted RBP11.1□□□□□ -0.63
SRRT-217ENST00000618411 MED13LQ71F56 2210 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 COX7A2LO14548 114 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 C11orf71Q6IPW1 123 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 USMG5Q96IX5 58 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 DUX5Q96PT3 197 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 MOB4Q9Y3A3 225 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 LRBAP50851 2863 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 A0A1B0GX51 115 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 C5orf38Q86SI9 138 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 DMXL1Q9Y485 3027 aa11.1□□□□□ -0.63
SRRT-217ENST00000618411 PEMTQ9UBM1 199 aa11.09□□□□□ -0.63
SRRT-217ENST00000618411 ACACAQ13085 2346 aa11.09□□□□□ -0.63
SRRT-217ENST00000618411 GRNP28799 593 aaKnown RBP11.09□□□□□ -0.63
SRRT-217ENST00000618411 FBXL19-AS1Q494R0 122 aa11.09□□□□□ -0.63
SRRT-217ENST00000618411 EDA2RQ9HAV5 297 aa11.09□□□□□ -0.63
SRRT-217ENST00000618411 A8MZ25 164 aa11.08□□□□□ -0.64
SRRT-217ENST00000618411 TMEM219Q86XT9 240 aa11.08□□□□□ -0.64
SRRT-217ENST00000618411 DAZ1Q9NQZ3 744 aaKnown RBP11.08□□□□□ -0.64
SRRT-217ENST00000618411 J3KT08 172 aa11.08□□□□□ -0.64
SRRT-217ENST00000618411 IGHV1OR15-1A0A075B7D0 117 aa11.07□□□□□ -0.64
SRRT-217ENST00000618411 COX7CP15954 63 aa11.07□□□□□ -0.64
SRRT-217ENST00000618411 CIRBPQ14011 172 aaKnown RBP11.07□□□□□ -0.64
SRRT-217ENST00000618411 C5orf47Q569G3 176 aa11.07□□□□□ -0.64
SRRT-217ENST00000618411 NDUFA1O15239 70 aa11.07□□□□□ -0.64
SRRT-217ENST00000618411 DAND5Q8N907 189 aa11.07□□□□□ -0.64
SRRT-217ENST00000618411 H3BUA1 57 aa11.06□□□□□ -0.64
SRRT-217ENST00000618411 IGHV3-11P01762 117 aa11.06□□□□□ -0.64
SRRT-217ENST00000618411 TRACP01848 142 aa11.06□□□□□ -0.64
SRRT-217ENST00000618411 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
SRRT-217ENST00000618411 DAZ4Q86SG3 579 aaKnown RBP11.06□□□□□ -0.64
SRRT-217ENST00000618411 DAZ3Q9NR90 486 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms