RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 POLQO75417 2590 aa8.74□□□□□ -1.01
C11orf54-215ENST00000617482 A0A0J9YY99 117 aa8.73□□□□□ -1.01
C11orf54-215ENST00000617482 ZNF876PQ49A33 203 aa8.73□□□□□ -1.01
C11orf54-215ENST00000617482 SYT8Q8NBV8 401 aa8.73□□□□□ -1.01
C11orf54-215ENST00000617482 LOC107984156A0A0G2JMH3 177 aa8.73□□□□□ -1.01
C11orf54-215ENST00000617482 ARL17AQ8IVW1 177 aa8.73□□□□□ -1.01
C11orf54-215ENST00000617482 ZNF580Q9UK33 172 aa8.73□□□□□ -1.01
C11orf54-215ENST00000617482 MYO18BQ8IUG5 2567 aa8.73□□□□□ -1.01
C11orf54-215ENST00000617482 TRBV6-5A0A0K0K1A5 114 aa8.72□□□□□ -1.01
C11orf54-215ENST00000617482 M0QXV9 152 aa8.72□□□□□ -1.01
C11orf54-215ENST00000617482 PRO0461Q9UI25 63 aa8.72□□□□□ -1.01
C11orf54-215ENST00000617482 DOPEY1Q5JWR5 2465 aa8.72□□□□□ -1.01
C11orf54-215ENST00000617482 UBE2D1P51668 147 aa8.72□□□□□ -1.01
C11orf54-215ENST00000617482 ODF3Q96PU9 254 aa8.72□□□□□ -1.01
C11orf54-215ENST00000617482 SPAG8Q99932 426 aaPredicted RBP8.72□□□□□ -1.01
C11orf54-215ENST00000617482 TSSC4Q9Y5U2 329 aaPredicted RBP8.72□□□□□ -1.01
C11orf54-215ENST00000617482 IGHV3-73A0A0B4J1V6 119 aa8.71□□□□□ -1.01
C11orf54-215ENST00000617482 P0DMU3 169 aa8.71□□□□□ -1.01
C11orf54-215ENST00000617482 FAM231AP0DMU4 169 aa8.71□□□□□ -1.01
C11orf54-215ENST00000617482 FAM231CP0DMU5 169 aa8.71□□□□□ -1.01
C11orf54-215ENST00000617482 GATA3P23771 443 aa8.71□□□□□ -1.01
C11orf54-215ENST00000617482 INSL3P51460 131 aa8.71□□□□□ -1.01
C11orf54-215ENST00000617482 LINC01356Q8N9X3 169 aa8.71□□□□□ -1.01
C11orf54-215ENST00000617482 GTSF1LQ9H1H1 148 aa8.71□□□□□ -1.01
C11orf54-215ENST00000617482 IGHV3-64A0A075B6Q5 118 aa8.71□□□□□ -1.02
C11orf54-215ENST00000617482 PRB1P04280 392 aa8.71□□□□□ -1.02
C11orf54-215ENST00000617482 PRM2P04554 102 aa8.71□□□□□ -1.02
C11orf54-215ENST00000617482 HOXD3P31249 432 aaPredicted RBP8.71□□□□□ -1.02
C11orf54-215ENST00000617482 PSMB2P49721 201 aa8.71□□□□□ -1.02
C11orf54-215ENST00000617482 TRPT1Q86TN4 253 aaKnown RBP8.71□□□□□ -1.02
C11orf54-215ENST00000617482 FBN2P35556 2912 aa8.71□□□□□ -1.02
C11orf54-215ENST00000617482 ZFYVE26Q68DK2 2539 aa8.7□□□□□ -1.02
C11orf54-215ENST00000617482 J3QQQ9 107 aa8.7□□□□□ -1.02
C11orf54-215ENST00000617482 CACNA1AO00555 2505 aa8.7□□□□□ -1.02
C11orf54-215ENST00000617482 KNCNA6PVL3 124 aa8.7□□□□□ -1.02
C11orf54-215ENST00000617482 J3QR89 54 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 IGHV3-30P01768 117 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 IGHV3-30-5P0DP03 117 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 LGALS3P17931 250 aaKnown RBP8.69□□□□□ -1.02
C11orf54-215ENST00000617482 NDUFA11Q86Y39 141 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 SLC25A29Q8N8R3 303 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 ACACBO00763 2458 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 GAGE12HA6NDE8 117 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 I3L3M4 83 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 CFC1BP0CG36 223 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 CFC1P0CG37 223 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 RBMY1A1P0DJD3 496 aaKnown RBP8.69□□□□□ -1.02
C11orf54-215ENST00000617482 RBMY1CP0DJD4 496 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 AZU1P20160 251 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 PROK1P58294 105 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 RBMY1FQ15415 496 aaKnown RBP8.69□□□□□ -1.02
C11orf54-215ENST00000617482 DEFB136Q30KP8 78 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 NSUN5P1Q3KNT7 163 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 TCTEX1D4Q5JR98 221 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 DLX4Q92988 240 aaPredicted RBP8.69□□□□□ -1.02
C11orf54-215ENST00000617482 AMELXQ99217 191 aa8.69□□□□□ -1.02
C11orf54-215ENST00000617482 BEX4Q9NWD9 120 aaPredicted RBP8.69□□□□□ -1.02
C11orf54-215ENST00000617482 CUBNO60494 3623 aa8.68□□□□□ -1.02
C11orf54-215ENST00000617482 DSCR9P59020 149 aa8.68□□□□□ -1.02
C11orf54-215ENST00000617482 RHOHQ15669 191 aa8.68□□□□□ -1.02
C11orf54-215ENST00000617482 C18orf65Q6ZTR6 163 aa8.68□□□□□ -1.02
C11orf54-215ENST00000617482 C20orf203Q8NBC4 194 aa8.68□□□□□ -1.02
C11orf54-215ENST00000617482 ZNF418Q8TF45 676 aaPredicted RBP8.68□□□□□ -1.02
C11orf54-215ENST00000617482 RAX2Q96IS3 184 aa8.68□□□□□ -1.02
C11orf54-215ENST00000617482 SIGMAR1Q99720 223 aa8.68□□□□□ -1.02
C11orf54-215ENST00000617482 MXRA5Q9NR99 2828 aa8.68□□□□□ -1.02
C11orf54-215ENST00000617482 ANKRD17O75179 2603 aaKnown RBP8.68□□□□□ -1.02
C11orf54-215ENST00000617482 TMEM89A2RUT3 159 aa8.68□□□□□ -1.02
C11orf54-215ENST00000617482 SMAGPQ0VAQ4 97 aa8.68□□□□□ -1.02
C11orf54-215ENST00000617482 A0A0J9YXV3 536 aa8.67□□□□□ -1.02
C11orf54-215ENST00000617482 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
C11orf54-215ENST00000617482 NFE4Q86UQ8 179 aa8.67□□□□□ -1.02
C11orf54-215ENST00000617482 SS18L2Q9UHA2 77 aa8.67□□□□□ -1.02
C11orf54-215ENST00000617482 VPREB3Q9UKI3 123 aa8.67□□□□□ -1.02
C11orf54-215ENST00000617482 FAM208BQ5VWN6 2430 aa8.67□□□□□ -1.02
C11orf54-215ENST00000617482 TMEM223A0PJW6 202 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 SLURP1P55000 103 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 DEFB131AP59861 70 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 CFAP126Q5VTH2 177 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 ZNF702PQ9H963 129 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 Q9UF83 564 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 IGLV4-3A0A075B6K6 122 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 TRGV11A0A075B6L2 103 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 UBE2D3P61077 147 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 UBE2D2P62837 147 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 CEMP1Q6PRD7 247 aaPredicted RBP8.66□□□□□ -1.02
C11orf54-215ENST00000617482 UBE2E2Q96LR5 201 aa8.66□□□□□ -1.02
C11orf54-215ENST00000617482 A0A096LNT2 108 aa8.65□□□□□ -1.02
C11orf54-215ENST00000617482 RHODO00212 210 aa8.65□□□□□ -1.02
C11orf54-215ENST00000617482 ELANEP08246 267 aa8.65□□□□□ -1.02
C11orf54-215ENST00000617482 ZNF22P17026 224 aaPredicted RBP8.65□□□□□ -1.02
C11orf54-215ENST00000617482 HIST2H2BDQ6DRA6 164 aa8.65□□□□□ -1.02
C11orf54-215ENST00000617482 PTH2Q96A98 100 aa8.65□□□□□ -1.02
C11orf54-215ENST00000617482 DUX3Q96PT4 197 aa8.65□□□□□ -1.02
C11orf54-215ENST00000617482 LEPROTO15243 131 aa8.65□□□□□ -1.02
C11orf54-215ENST00000617482 RNASE13Q5GAN3 156 aaKnown RBP8.65□□□□□ -1.02
C11orf54-215ENST00000617482 TRAV2A0A0B4J234 112 aa8.64□□□□□ -1.03
C11orf54-215ENST00000617482 TCL1BO95988 128 aa8.64□□□□□ -1.03
C11orf54-215ENST00000617482 SCGB1C2P0DMR2 95 aa8.64□□□□□ -1.03
C11orf54-215ENST00000617482 PRO1854Q9UHT4 67 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms