RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 SDHAF1A6NFY7 115 aa7.84□□□□□ -1.15
TNFAIP3-208ENST00000615468 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.84□□□□□ -1.15
TNFAIP3-208ENST00000615468 A0A0J9YXV3 536 aa7.84□□□□□ -1.15
TNFAIP3-208ENST00000615468 VCYO14598 125 aa7.84□□□□□ -1.15
TNFAIP3-208ENST00000615468 CLEC19AQ6UXS0 136 aa7.84□□□□□ -1.15
TNFAIP3-208ENST00000615468 LRRC75A-AS1Q8N1F1 130 aa7.84□□□□□ -1.15
TNFAIP3-208ENST00000615468 ZNF580Q9UK33 172 aa7.84□□□□□ -1.15
TNFAIP3-208ENST00000615468 IGLV11-55A0A075B6I3 123 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 TRBV7-7A0A0K0K1E9 115 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 LEPROTO15243 131 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 IGLV1-47P01700 117 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 ZNF672Q499Z4 452 aaPredicted RBP7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 TMEM141Q96I45 108 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 NOTCH3Q9UM47 2321 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 TRACP01848 142 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 C15orf32Q32M92 178 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 JPT2Q9H910 190 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 SORL1Q92673 2214 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 TRAV25A0A0B4J276 109 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 TRAV21A0A0B4J279 112 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 RHOHQ15669 191 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 PRR9Q5T870 116 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 LINC00526Q96FQ7 95 aa7.83□□□□□ -1.16
TNFAIP3-208ENST00000615468 IGHV1-69DA0A0B4J2H0 117 aa7.82□□□□□ -1.16
TNFAIP3-208ENST00000615468 TRAV13-1A0A0B4J241 112 aa7.82□□□□□ -1.16
TNFAIP3-208ENST00000615468 A0A0J9YXY3 114 aa7.82□□□□□ -1.16
TNFAIP3-208ENST00000615468 IGIPA6NJ69 53 aa7.82□□□□□ -1.16
TNFAIP3-208ENST00000615468 BUB3O43684 328 aa7.82□□□□□ -1.16
TNFAIP3-208ENST00000615468 CDSNQ15517 529 aa7.82□□□□□ -1.16
TNFAIP3-208ENST00000615468 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.82□□□□□ -1.163e-7■■■■■ 32
TNFAIP3-208ENST00000615468 DAND5Q8N907 189 aa7.82□□□□□ -1.16
TNFAIP3-208ENST00000615468 PSMG3-AS1Q96PY0 264 aa7.82□□□□□ -1.16
TNFAIP3-208ENST00000615468 FAM240AA0A1B0GVK7 77 aa7.82□□□□□ -1.16
TNFAIP3-208ENST00000615468 I3L3M4 83 aa7.82□□□□□ -1.16
TNFAIP3-208ENST00000615468 TIMM21Q9BVV7 248 aa7.81□□□□□ -1.16
TNFAIP3-208ENST00000615468 DPM3Q9P2X0 92 aa7.81□□□□□ -1.16
TNFAIP3-208ENST00000615468 POLQO75417 2590 aa7.81□□□□□ -1.16
TNFAIP3-208ENST00000615468 TMEM223A0PJW6 202 aa7.81□□□□□ -1.16
TNFAIP3-208ENST00000615468 F8W735 103 aaPredicted RBP7.81□□□□□ -1.16
TNFAIP3-208ENST00000615468 ZNF876PQ49A33 203 aa7.81□□□□□ -1.16
TNFAIP3-208ENST00000615468 LINC00643Q86TS7 51 aa7.81□□□□□ -1.16
TNFAIP3-208ENST00000615468 IGHV4-4A0A075B6R2 117 aa7.81□□□□□ -1.16
TNFAIP3-208ENST00000615468 E7EQL1 145 aa7.81□□□□□ -1.16
TNFAIP3-208ENST00000615468 C2CD3Q4AC94 2353 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 NSUN5P1Q3KNT7 163 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 F5H768 121 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 COX7CP15954 63 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 EBI3Q14213 229 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 RNASE13Q5GAN3 156 aaKnown RBP7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 HRCT1Q6UXD1 115 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 TMEM219Q86XT9 240 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 AMELXQ99217 191 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 RNF5Q99942 180 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 NDUFA12Q9UI09 145 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 DSCR8Q96T75 97 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 TIMM17AQ99595 171 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 IMUPQ9GZP8 106 aa7.8□□□□□ -1.16
TNFAIP3-208ENST00000615468 ACYP1P07311 99 aa7.79□□□□□ -1.16
TNFAIP3-208ENST00000615468 POM121L12Q8N7R1 296 aa7.79□□□□□ -1.16
TNFAIP3-208ENST00000615468 ASH1LQ9NR48 2969 aaKnown RBP7.79□□□□□ -1.16
TNFAIP3-208ENST00000615468 LST1O00453 97 aa7.79□□□□□ -1.16
TNFAIP3-208ENST00000615468 RNASE6Q93091 150 aaKnown RBP7.79□□□□□ -1.16
TNFAIP3-208ENST00000615468 LRRK2Q5S007 2527 aa7.79□□□□□ -1.16
TNFAIP3-208ENST00000615468 IGHV3-30-3P0DP02 117 aa7.79□□□□□ -1.16
TNFAIP3-208ENST00000615468 SUMO4Q6EEV6 95 aa7.79□□□□□ -1.16
TNFAIP3-208ENST00000615468 KIR2DL5BQ8NHK3 375 aa7.79□□□□□ -1.16
TNFAIP3-208ENST00000615468 A0A1B0GX51 115 aa7.78□□□□□ -1.16
TNFAIP3-208ENST00000615468 F6UB75 175 aa7.78□□□□□ -1.16
TNFAIP3-208ENST00000615468 M0R1W7 72 aa7.78□□□□□ -1.16
TNFAIP3-208ENST00000615468 GPHB5Q86YW7 130 aa7.78□□□□□ -1.16
TNFAIP3-208ENST00000615468 A8MZ25 164 aa7.78□□□□□ -1.16
TNFAIP3-208ENST00000615468 ZNF625Q96I27 306 aaPredicted RBP7.78□□□□□ -1.16
TNFAIP3-208ENST00000615468 ADAMTSL4-AS1Q5T5F5 129 aa7.77□□□□□ -1.17
TNFAIP3-208ENST00000615468 C9orf47Q6ZRZ4 202 aa7.77□□□□□ -1.17
TNFAIP3-208ENST00000615468 IGKV3D-7A0A0C4DH55 119 aa7.77□□□□□ -1.17
TNFAIP3-208ENST00000615468 CD28P10747 220 aa7.77□□□□□ -1.17
TNFAIP3-208ENST00000615468 UCNP55089 124 aa7.77□□□□□ -1.17
TNFAIP3-208ENST00000615468 C4orf26Q17RF5 130 aa7.77□□□□□ -1.17
TNFAIP3-208ENST00000615468 SMCR5Q8TEV8 140 aa7.77□□□□□ -1.17
TNFAIP3-208ENST00000615468 SDIM1Q6ZPB5 146 aa7.77□□□□□ -1.17
TNFAIP3-208ENST00000615468 PEMTQ9UBM1 199 aa7.77□□□□□ -1.17
TNFAIP3-208ENST00000615468 USP9YO00507 2555 aaPredicted RBP7.77□□□□□ -1.17
TNFAIP3-208ENST00000615468 DAZ2Q13117 558 aaKnown RBP7.76□□□□□ -1.17
TNFAIP3-208ENST00000615468 DAZ4Q86SG3 579 aaKnown RBP7.76□□□□□ -1.17
TNFAIP3-208ENST00000615468 RNF152Q8N8N0 203 aa7.76□□□□□ -1.17
TNFAIP3-208ENST00000615468 DAZ1Q9NQZ3 744 aaKnown RBP7.76□□□□□ -1.17
TNFAIP3-208ENST00000615468 DAZ3Q9NR90 486 aaKnown RBP7.76□□□□□ -1.17
TNFAIP3-208ENST00000615468 RNF223E7ERA6 249 aa7.76□□□□□ -1.17
TNFAIP3-208ENST00000615468 ATOX1O00244 68 aa7.76□□□□□ -1.17
TNFAIP3-208ENST00000615468 BAALC-AS2P0C853 105 aa7.76□□□□□ -1.17
TNFAIP3-208ENST00000615468 CSPG4Q6UVK1 2322 aa7.76□□□□□ -1.17
TNFAIP3-208ENST00000615468 ZNF462Q96JM2 2506 aa7.76□□□□□ -1.17
TNFAIP3-208ENST00000615468 POLR2KP53803 58 aaKnown RBP7.75□□□□□ -1.17
TNFAIP3-208ENST00000615468 LINC00477Q96M19 166 aa7.75□□□□□ -1.17
TNFAIP3-208ENST00000615468 CLPSL1A2RUU4 121 aa7.75□□□□□ -1.17
TNFAIP3-208ENST00000615468 IGKV3-20P01619 116 aa7.75□□□□□ -1.17
TNFAIP3-208ENST00000615468 ATP5G1P05496 136 aa7.75□□□□□ -1.17
TNFAIP3-208ENST00000615468 GNLYP22749 145 aa7.75□□□□□ -1.17
TNFAIP3-208ENST00000615468 OVOL1O14753 267 aa7.74□□□□□ -1.17
TNFAIP3-208ENST00000615468 VMO1Q7Z5L0 202 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms