RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 RS1O15537 224 aa11.09□□□□□ -0.63
VPS36-207ENST00000611132 ZFAND2AQ8N6M9 145 aa11.09□□□□□ -0.63
VPS36-207ENST00000611132 MDFICQ9P1T7 246 aa11.09□□□□□ -0.63
VPS36-207ENST00000611132 BLCAPP62952 87 aa11.09□□□□□ -0.63
VPS36-207ENST00000611132 C3orf56Q8N813 242 aa11.09□□□□□ -0.63
VPS36-207ENST00000611132 PIEZO2Q9H5I5 2752 aa11.08□□□□□ -0.64
VPS36-207ENST00000611132 LINC01548A6NM66 108 aa11.08□□□□□ -0.64
VPS36-207ENST00000611132 TRBV12-3P01733 135 aa11.08□□□□□ -0.64
VPS36-207ENST00000611132 CMC4P56277 68 aaPredicted RBP11.08□□□□□ -0.64
VPS36-207ENST00000611132 IGHV3-30P01768 117 aa11.08□□□□□ -0.64
VPS36-207ENST00000611132 IGHV3-30-5P0DP03 117 aa11.08□□□□□ -0.64
VPS36-207ENST00000611132 AGRNO00468 2067 aa11.08□□□□□ -0.64
VPS36-207ENST00000611132 IGHV4-4A0A075B6R2 117 aa11.07□□□□□ -0.64
VPS36-207ENST00000611132 HERV-K104P63124 156 aa11.07□□□□□ -0.64
VPS36-207ENST00000611132 P0DMU3 169 aa11.07□□□□□ -0.64
VPS36-207ENST00000611132 FAM231AP0DMU4 169 aa11.07□□□□□ -0.64
VPS36-207ENST00000611132 FAM231CP0DMU5 169 aa11.07□□□□□ -0.64
VPS36-207ENST00000611132 K7EMT4 169 aa11.07□□□□□ -0.64
VPS36-207ENST00000611132 EBI3Q14213 229 aa11.07□□□□□ -0.64
VPS36-207ENST00000611132 COL4A2P08572 1712 aa11.07□□□□□ -0.64
VPS36-207ENST00000611132 GATA3P23771 443 aa11.07□□□□□ -0.64
VPS36-207ENST00000611132 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
VPS36-207ENST00000611132 MIAQ16674 131 aa11.06□□□□□ -0.64
VPS36-207ENST00000611132 C20orf173Q96LM9 149 aa11.06□□□□□ -0.64
VPS36-207ENST00000611132 UBL5Q9BZL1 73 aa11.06□□□□□ -0.64
VPS36-207ENST00000611132 TINCRA0A1B0GVN0 87 aa11.05□□□□□ -0.64
VPS36-207ENST00000611132 SS18Q15532 418 aa11.05□□□□□ -0.64
VPS36-207ENST00000611132 ACACBO00763 2458 aa11.05□□□□□ -0.64
VPS36-207ENST00000611132 TMEM223A0PJW6 202 aa11.05□□□□□ -0.64
VPS36-207ENST00000611132 GNLYP22749 145 aa11.05□□□□□ -0.64
VPS36-207ENST00000611132 U3KQE9 123 aa11.05□□□□□ -0.64
VPS36-207ENST00000611132 ELANEP08246 267 aa11.05□□□□□ -0.64
VPS36-207ENST00000611132 COX8CQ7Z4L0 72 aa11.05□□□□□ -0.64
VPS36-207ENST00000611132 FAM208BQ5VWN6 2430 aa11.05□□□□□ -0.64
VPS36-207ENST00000611132 PF4P02776 101 aa11.05□□□□□ -0.64
VPS36-207ENST00000611132 MRPL23Q16540 153 aaKnown RBP11.05□□□□□ -0.64
VPS36-207ENST00000611132 ATOX1O00244 68 aa11.04□□□□□ -0.64
VPS36-207ENST00000611132 LINC01356Q8N9X3 169 aa11.04□□□□□ -0.64
VPS36-207ENST00000611132 VSIG2Q96IQ7 327 aa11.04□□□□□ -0.64
VPS36-207ENST00000611132 A0A0C4DFX4 3053 aa11.04□□□□□ -0.64
VPS36-207ENST00000611132 RPL35AP18077 110 aaKnown RBP11.04□□□□□ -0.64
VPS36-207ENST00000611132 NFE4Q86UQ8 179 aa11.04□□□□□ -0.64
VPS36-207ENST00000611132 TRIAP1O43715 76 aa11.04□□□□□ -0.64
VPS36-207ENST00000611132 HOXD3P31249 432 aaPredicted RBP11.04□□□□□ -0.64
VPS36-207ENST00000611132 TRBV30A0A0K0K1B3 111 aa11.04□□□□□ -0.64
VPS36-207ENST00000611132 TNFRSF13BO14836 293 aaPredicted RBP11.04□□□□□ -0.64
VPS36-207ENST00000611132 LINC00643Q86TS7 51 aa11.04□□□□□ -0.64
VPS36-207ENST00000611132 UBE2D1P51668 147 aa11.03□□□□□ -0.64
VPS36-207ENST00000611132 CFHR3Q02985 330 aa11.03□□□□□ -0.64
VPS36-207ENST00000611132 CEMP1Q6PRD7 247 aaPredicted RBP11.03□□□□□ -0.64
VPS36-207ENST00000611132 Q6ZS46 218 aa11.03□□□□□ -0.64
VPS36-207ENST00000611132 A0A0J9YX75 114 aa11.03□□□□□ -0.64
VPS36-207ENST00000611132 TLN1Q9Y490 2541 aaKnown RBP11.03□□□□□ -0.64
VPS36-207ENST00000611132 IGHG2P01859 326 aa11.03□□□□□ -0.64
VPS36-207ENST00000611132 NSUN5P1Q3KNT7 163 aa11.03□□□□□ -0.64
VPS36-207ENST00000611132 PRR9Q5T870 116 aa11.03□□□□□ -0.64
VPS36-207ENST00000611132 IGHV4-38-2P0DP08 117 aa11.02□□□□□ -0.64
VPS36-207ENST00000611132 TRBV27A0A0K0K1C4 114 aa11.02□□□□□ -0.65
VPS36-207ENST00000611132 RPL32P62910 135 aaKnown RBP11.02□□□□□ -0.65
VPS36-207ENST00000611132 FBXL19-AS1Q494R0 122 aa11.02□□□□□ -0.65
VPS36-207ENST00000611132 GPHB5Q86YW7 130 aa11.02□□□□□ -0.65
VPS36-207ENST00000611132 Q8NA96 180 aa11.02□□□□□ -0.65
VPS36-207ENST00000611132 IGLV4-3A0A075B6K6 122 aa11.02□□□□□ -0.65
VPS36-207ENST00000611132 IGHV4OR15-8A0A075B7B6 117 aa11.02□□□□□ -0.65
VPS36-207ENST00000611132 A0A087WW49 117 aa11.02□□□□□ -0.65
VPS36-207ENST00000611132 SND1-IT1Q9HBX3 110 aa11.02□□□□□ -0.65
VPS36-207ENST00000611132 H0YGX0 51 aa11.01□□□□□ -0.65
VPS36-207ENST00000611132 NXPH4O95158 308 aa11.01□□□□□ -0.65
VPS36-207ENST00000611132 HTN3P15516 51 aa11.01□□□□□ -0.65
VPS36-207ENST00000611132 TRAV4A0A0B4J268 109 aa11.01□□□□□ -0.65
VPS36-207ENST00000611132 A0A1B0GX51 115 aa11.01□□□□□ -0.65
VPS36-207ENST00000611132 RNASE3P12724 160 aaKnown RBP11.01□□□□□ -0.65
VPS36-207ENST00000611132 ADAMTS20P59510 1910 aa11□□□□□ -0.65
VPS36-207ENST00000611132 IGHV4-59P01825 116 aa11□□□□□ -0.65
VPS36-207ENST00000611132 POLR2KP53803 58 aaKnown RBP11□□□□□ -0.65
VPS36-207ENST00000611132 Q8N6K4 173 aa11□□□□□ -0.65
VPS36-207ENST00000611132 IGHV4-61A0A0C4DH41 118 aa11□□□□□ -0.65
VPS36-207ENST00000611132 IGKV3D-7A0A0C4DH55 119 aa11□□□□□ -0.65
VPS36-207ENST00000611132 DEFB130BP0DP73 79 aa11□□□□□ -0.65
VPS36-207ENST00000611132 DEFB130AP0DP74 79 aa11□□□□□ -0.65
VPS36-207ENST00000611132 J3KT08 172 aa11□□□□□ -0.65
VPS36-207ENST00000611132 TRBV6-5A0A0K0K1A5 114 aa10.99□□□□□ -0.65
VPS36-207ENST00000611132 M0QY20 66 aa10.99□□□□□ -0.65
VPS36-207ENST00000611132 ORMDL1Q9P0S3 153 aa10.99□□□□□ -0.65
VPS36-207ENST00000611132 IGLV2-18A0A075B6J9 118 aa10.99□□□□□ -0.65
VPS36-207ENST00000611132 UBE2D3P61077 147 aa10.99□□□□□ -0.65
VPS36-207ENST00000611132 UBE2D2P62837 147 aa10.99□□□□□ -0.65
VPS36-207ENST00000611132 Q6ZQT7 251 aa10.99□□□□□ -0.65
VPS36-207ENST00000611132 HAMPP81172 84 aa10.99□□□□□ -0.65
VPS36-207ENST00000611132 ATP5G1P05496 136 aa10.98□□□□□ -0.65
VPS36-207ENST00000611132 COX7A2LO14548 114 aa10.98□□□□□ -0.65
VPS36-207ENST00000611132 MRGPRG-AS1Q2M3A8 158 aa10.98□□□□□ -0.65
VPS36-207ENST00000611132 RNF152Q8N8N0 203 aa10.98□□□□□ -0.65
VPS36-207ENST00000611132 DEFB112Q30KQ8 113 aa10.98□□□□□ -0.65
VPS36-207ENST00000611132 PSMG3-AS1Q96PY0 264 aa10.98□□□□□ -0.65
VPS36-207ENST00000611132 ADORA2A-AS1P86434 159 aa10.97□□□□□ -0.65
VPS36-207ENST00000611132 CRLF1O75462 422 aa10.97□□□□□ -0.65
VPS36-207ENST00000611132 CLPSL1A2RUU4 121 aa10.97□□□□□ -0.65
VPS36-207ENST00000611132 ODF3Q96PU9 254 aa10.97□□□□□ -0.65
VPS36-207ENST00000611132 RBMY1FQ15415 496 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms