RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 INSP01308 110 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 RNASE3P12724 160 aaKnown RBP12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 EGFEM1PQ0D2K5 195 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 FAM159AQ6UWV7 190 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 NRACQ8N912 160 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 DNAH3Q8TD57 4116 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 IGHV1OR15-1A0A075B7D0 117 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 TRAV8-6A0A0B4J262 113 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 PRSS47A8MTI9 375 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 HSD52Q0P140 79 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 SMIM15Q7Z3B0 74 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 PCP2Q8IVA1 136 aa12.61□□□□□ -0.39
PPFIA3-207ENST00000602716 HTN1P15515 57 aa12.6□□□□□ -0.39
PPFIA3-207ENST00000602716 NMUP48645 174 aa12.6□□□□□ -0.39
PPFIA3-207ENST00000602716 DNHD1Q96M86 4753 aa12.59□□□□□ -0.39
PPFIA3-207ENST00000602716 IGHV3OR16-12A0A075B7B8 117 aa12.59□□□□□ -0.39
PPFIA3-207ENST00000602716 SAMD5Q5TGI4 173 aa12.59□□□□□ -0.39
PPFIA3-207ENST00000602716 MDFICQ9P1T7 246 aa12.59□□□□□ -0.39
PPFIA3-207ENST00000602716 ASIPP42127 132 aa12.59□□□□□ -0.39
PPFIA3-207ENST00000602716 HHLA3Q9XRX5 114 aa12.59□□□□□ -0.39
PPFIA3-207ENST00000602716 IGHV3-16A0A0C4DH30 117 aa12.58□□□□□ -0.4
PPFIA3-207ENST00000602716 A6NDN8 102 aa12.58□□□□□ -0.4
PPFIA3-207ENST00000602716 TRAV26-2A0A0B4J265 109 aa12.57□□□□□ -0.4
PPFIA3-207ENST00000602716 PRSS1P07477 247 aa12.57□□□□□ -0.4
PPFIA3-207ENST00000602716 SPANXN1Q5VSR9 72 aa12.57□□□□□ -0.4
PPFIA3-207ENST00000602716 H3BRM9 83 aa12.57□□□□□ -0.4
PPFIA3-207ENST00000602716 ATP5LO75964 103 aa12.57□□□□□ -0.4
PPFIA3-207ENST00000602716 SMIM17P0DL12 118 aa12.57□□□□□ -0.4
PPFIA3-207ENST00000602716 IGHV4-30-4P0DP06 118 aa12.57□□□□□ -0.4
PPFIA3-207ENST00000602716 CSNK1G2-AS1Q8NCQ2 148 aa12.57□□□□□ -0.4
PPFIA3-207ENST00000602716 LINC01587Q99440 93 aa12.57□□□□□ -0.4
PPFIA3-207ENST00000602716 IGKCP01834 107 aa12.56□□□□□ -0.4
PPFIA3-207ENST00000602716 S100A4P26447 101 aaKnown RBP12.56□□□□□ -0.4
PPFIA3-207ENST00000602716 LAGE3Q14657 143 aa12.56□□□□□ -0.4
PPFIA3-207ENST00000602716 IGKV2D-26A0A0A0MRZ7 120 aa12.55□□□□□ -0.4
PPFIA3-207ENST00000602716 C9orf118A6NHY6 69 aa12.55□□□□□ -0.4
PPFIA3-207ENST00000602716 PRB2P02812 416 aaPredicted RBP12.55□□□□□ -0.4
PPFIA3-207ENST00000602716 AZU1P20160 251 aa12.55□□□□□ -0.4
PPFIA3-207ENST00000602716 MRAP2Q96G30 205 aa12.55□□□□□ -0.4
PPFIA3-207ENST00000602716 DPM2O94777 84 aa12.55□□□□□ -0.4
PPFIA3-207ENST00000602716 RIPPLY3P57055 190 aa12.55□□□□□ -0.4
PPFIA3-207ENST00000602716 MORN3Q6PF18 240 aaPredicted RBP12.55□□□□□ -0.4
PPFIA3-207ENST00000602716 C9orf85Q96MD7 179 aa12.55□□□□□ -0.4
PPFIA3-207ENST00000602716 CSTL1Q9H114 145 aa12.54□□□□□ -0.4
PPFIA3-207ENST00000602716 M0R381 172 aa12.54□□□□□ -0.4
PPFIA3-207ENST00000602716 HIGD1BQ9P298 99 aa12.54□□□□□ -0.4
PPFIA3-207ENST00000602716 C11orf72Q8NBR9 251 aa12.53□□□□□ -0.4
PPFIA3-207ENST00000602716 CST9LQ9H4G1 147 aa12.53□□□□□ -0.4
PPFIA3-207ENST00000602716 NOTCH1P46531 2555 aa12.52□□□□□ -0.41
PPFIA3-207ENST00000602716 TRGV11A0A075B6L2 103 aa12.52□□□□□ -0.41
PPFIA3-207ENST00000602716 MED14OSP0DP75 135 aa12.52□□□□□ -0.41
PPFIA3-207ENST00000602716 UFSP1Q6NVU6 142 aa12.52□□□□□ -0.41
PPFIA3-207ENST00000602716 LINC00467Q9BRT7 94 aa12.52□□□□□ -0.41
PPFIA3-207ENST00000602716 SMIM2Q9BVW6 85 aa12.52□□□□□ -0.41
PPFIA3-207ENST00000602716 PHLDA3Q9Y5J5 127 aa12.52□□□□□ -0.41
PPFIA3-207ENST00000602716 AP1S3Q96PC3 154 aa12.51□□□□□ -0.41
PPFIA3-207ENST00000602716 MRPL35Q9NZE8 188 aaKnown RBP12.51□□□□□ -0.41
PPFIA3-207ENST00000602716 MGAM2Q2M2H8 2515 aa12.51□□□□□ -0.41
PPFIA3-207ENST00000602716 MUC4Q99102 2169 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 GAGE12BA1L429 117 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 NXPH4O95158 308 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 ZC2HC1BQ5TFG8 222 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 C1QTNF4Q9BXJ3 329 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 TTTY13Q9BZ97 58 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 JPT2Q9H910 190 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 A0A087WX48 190 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 H3BUT2 72 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 DEFB135Q30KP9 77 aa12.5□□□□□ -0.41
PPFIA3-207ENST00000602716 OCIAD2Q56VL3 154 aa12.49□□□□□ -0.41
PPFIA3-207ENST00000602716 RASL10AQ92737 203 aa12.49□□□□□ -0.41
PPFIA3-207ENST00000602716 GTF2H5Q6ZYL4 71 aa12.49□□□□□ -0.41
PPFIA3-207ENST00000602716 CHAC1Q9BUX1 264 aa12.49□□□□□ -0.41
PPFIA3-207ENST00000602716 C20orf78Q9BR46 151 aa12.48□□□□□ -0.41
PPFIA3-207ENST00000602716 DPH3P1Q9H4G8 78 aa12.48□□□□□ -0.41
PPFIA3-207ENST00000602716 CHTOPQ9Y3Y2 248 aaKnown RBP12.48□□□□□ -0.41
PPFIA3-207ENST00000602716 NBEAL1Q6ZS30 2694 aa12.48□□□□□ -0.41
PPFIA3-207ENST00000602716 TRBV25-1A0A075B6N4 114 aa12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 PLAC8L1A1L4L8 177 aa12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 K7EP34 96 aa12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 SUMO2P61956 95 aaKnown RBP12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 ZNF415Q09FC8 603 aa12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 KIR2DL5BQ8NHK3 375 aa12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 IL17DQ8TAD2 202 aa12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 NAA38Q9BRA0 125 aaKnown RBP12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 PLNP26678 52 aa12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 ORMDL2Q53FV1 153 aa12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 RAB37Q96AX2 223 aa12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 X6R8D5 127 aa12.47□□□□□ -0.41
PPFIA3-207ENST00000602716 TRAV12-1A0A0B4J245 112 aa12.46□□□□□ -0.41
PPFIA3-207ENST00000602716 GCSHP23434 173 aa12.46□□□□□ -0.41
PPFIA3-207ENST00000602716 FXYD2P54710 66 aa12.46□□□□□ -0.41
PPFIA3-207ENST00000602716 APOC4P55056 127 aa12.46□□□□□ -0.41
PPFIA3-207ENST00000602716 TOMM6Q96B49 74 aa12.46□□□□□ -0.41
PPFIA3-207ENST00000602716 MRPL16Q9NX20 251 aaKnown RBP12.46□□□□□ -0.41
PPFIA3-207ENST00000602716 A0A1W2PPM0 123 aa12.45□□□□□ -0.42
PPFIA3-207ENST00000602716 RNF151Q2KHN1 245 aa12.45□□□□□ -0.42
PPFIA3-207ENST00000602716 TMEM263Q8WUH6 116 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms