RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 PKD1P98161 4303 aa13.04□□□□□ -0.32
CCDC9-205ENST00000600117 A0A1B0GW15 77 aa13.04□□□□□ -0.32
CCDC9-205ENST00000600117 F5H697 171 aa13.04□□□□□ -0.32
CCDC9-205ENST00000600117 SUMO4Q6EEV6 95 aa13.04□□□□□ -0.32
CCDC9-205ENST00000600117 TRBV10-1A0A0K0K1A3 114 aa13.03□□□□□ -0.32
CCDC9-205ENST00000600117 M0QY20 66 aa13.03□□□□□ -0.32
CCDC9-205ENST00000600117 HBBP68871 147 aa13.03□□□□□ -0.32
CCDC9-205ENST00000600117 ATRAIDQ6UW56 229 aa13.03□□□□□ -0.32
CCDC9-205ENST00000600117 ATP5L2Q7Z4Y8 100 aa13.03□□□□□ -0.32
CCDC9-205ENST00000600117 GATD1Q8NB37 220 aa13.03□□□□□ -0.32
CCDC9-205ENST00000600117 RNF185Q96GF1 192 aa13.03□□□□□ -0.32
CCDC9-205ENST00000600117 CAMPP49913 170 aa13.02□□□□□ -0.33
CCDC9-205ENST00000600117 BTF3L4Q96K17 158 aa13.02□□□□□ -0.33
CCDC9-205ENST00000600117 GAGE12JA6NER3 117 aa13.01□□□□□ -0.33
CCDC9-205ENST00000600117 SRIP30626 198 aa13.01□□□□□ -0.33
CCDC9-205ENST00000600117 GAGE1Q13065 139 aa13.01□□□□□ -0.33
CCDC9-205ENST00000600117 GAGE4Q13068 117 aa13.01□□□□□ -0.33
CCDC9-205ENST00000600117 GAGE5Q13069 117 aa13.01□□□□□ -0.33
CCDC9-205ENST00000600117 GAGE13Q4V321 117 aa13.01□□□□□ -0.33
CCDC9-205ENST00000600117 KCNIP4Q6PIL6 250 aa13.01□□□□□ -0.33
CCDC9-205ENST00000600117 AMN1Q8IY45 258 aa13.01□□□□□ -0.33
CCDC9-205ENST00000600117 NEXN-AS1Q8NBZ9 246 aa13.01□□□□□ -0.33
CCDC9-205ENST00000600117 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
CCDC9-205ENST00000600117 RAB4AP20338 218 aa13□□□□□ -0.33
CCDC9-205ENST00000600117 ESRGQ1W209 222 aa13□□□□□ -0.33
CCDC9-205ENST00000600117 NEGR1Q7Z3B1 354 aa13□□□□□ -0.33
CCDC9-205ENST00000600117 TRAV26-2A0A0B4J265 109 aa12.99□□□□□ -0.33
CCDC9-205ENST00000600117 S100A8P05109 93 aa12.99□□□□□ -0.33
CCDC9-205ENST00000600117 FAM104BQ5XKR9 115 aa12.99□□□□□ -0.33
CCDC9-205ENST00000600117 URGCP-MRPS24S4R325 110 aa12.99□□□□□ -0.33
CCDC9-205ENST00000600117 H7C1H1 209 aa12.98□□□□□ -0.33
CCDC9-205ENST00000600117 S100PP25815 95 aa12.98□□□□□ -0.33
CCDC9-205ENST00000600117 RPL36AP83881 106 aaKnown RBP12.98□□□□□ -0.33
CCDC9-205ENST00000600117 RASL11AQ6T310 242 aa12.98□□□□□ -0.33
CCDC9-205ENST00000600117 SH2D6Q7Z4S9 175 aa12.98□□□□□ -0.33
CCDC9-205ENST00000600117 ZNRF2Q8NHG8 242 aa12.98□□□□□ -0.33
CCDC9-205ENST00000600117 RPL36ALQ969Q0 106 aaKnown RBP12.98□□□□□ -0.33
CCDC9-205ENST00000600117 LINC00588Q9Y4M8 146 aa12.98□□□□□ -0.33
CCDC9-205ENST00000600117 TRBV7-3A0A075B6L6 115 aa12.97□□□□□ -0.33
CCDC9-205ENST00000600117 GAS8-AS1O95177 125 aa12.97□□□□□ -0.33
CCDC9-205ENST00000600117 UBE2D3P61077 147 aa12.97□□□□□ -0.33
CCDC9-205ENST00000600117 UBE2D2P62837 147 aa12.97□□□□□ -0.33
CCDC9-205ENST00000600117 LYPD5Q6UWN5 251 aa12.97□□□□□ -0.33
CCDC9-205ENST00000600117 ATP6V0E2Q8NHE4 81 aa12.97□□□□□ -0.33
CCDC9-205ENST00000600117 FRZBQ92765 325 aa12.97□□□□□ -0.33
CCDC9-205ENST00000600117 MRPL51Q4U2R6 128 aaKnown RBP12.96□□□□□ -0.33
CCDC9-205ENST00000600117 DNAJC30Q96LL9 226 aa12.96□□□□□ -0.33
CCDC9-205ENST00000600117 NIT2Q9NQR4 276 aa12.96□□□□□ -0.33
CCDC9-205ENST00000600117 HSPG2P98160 4391 aa12.95□□□□□ -0.34
CCDC9-205ENST00000600117 CCL18P55774 89 aa12.95□□□□□ -0.34
CCDC9-205ENST00000600117 TIRAPP58753 221 aa12.95□□□□□ -0.34
CCDC9-205ENST00000600117 RPL39LQ96EH5 51 aaKnown RBP12.95□□□□□ -0.34
CCDC9-205ENST00000600117 MRAP2Q96G30 205 aa12.95□□□□□ -0.34
CCDC9-205ENST00000600117 LINC00336Q6ZUF6 198 aa12.94□□□□□ -0.34
CCDC9-205ENST00000600117 YPEL4Q96NS1 127 aa12.94□□□□□ -0.34
CCDC9-205ENST00000600117 MRPS16Q9Y3D3 137 aaKnown RBP12.94□□□□□ -0.34
CCDC9-205ENST00000600117 SMKR1H3BMG3 65 aa12.93□□□□□ -0.34
CCDC9-205ENST00000600117 ELOBQ15370 118 aa12.93□□□□□ -0.34
CCDC9-205ENST00000600117 TMEM136Q6ZRR5 245 aa12.93□□□□□ -0.34
CCDC9-205ENST00000600117 UBE2DNLQ8IWF7 75 aa12.93□□□□□ -0.34
CCDC9-205ENST00000600117 GTSF1LQ9H1H1 148 aa12.93□□□□□ -0.34
CCDC9-205ENST00000600117 TNFRSF18Q9Y5U5 241 aa12.93□□□□□ -0.34
CCDC9-205ENST00000600117 NCR2O95944 276 aa12.92□□□□□ -0.34
CCDC9-205ENST00000600117 RPS10P46783 165 aaKnown RBP12.92□□□□□ -0.34
CCDC9-205ENST00000600117 UPK3BQ9BT76 320 aa12.92□□□□□ -0.34
CCDC9-205ENST00000600117 TGIF2-C20orf24A0A0A6YYL0 155 aa12.91□□□□□ -0.34
CCDC9-205ENST00000600117 TRBV6-5A0A0K0K1A5 114 aa12.91□□□□□ -0.34
CCDC9-205ENST00000600117 A0A1B0GVY2 172 aa12.91□□□□□ -0.34
CCDC9-205ENST00000600117 NRACQ8N912 160 aa12.91□□□□□ -0.34
CCDC9-205ENST00000600117 TRBV24-1A0A075B6N3 115 aa12.9□□□□□ -0.34
CCDC9-205ENST00000600117 IGHV3-38A0A0C4DH36 116 aa12.9□□□□□ -0.34
CCDC9-205ENST00000600117 OR10J3Q5JRS4 329 aa12.9□□□□□ -0.34
CCDC9-205ENST00000600117 CBLN2Q8IUK8 224 aa12.9□□□□□ -0.34
CCDC9-205ENST00000600117 LELP1Q5T871 98 aa12.89□□□□□ -0.35
CCDC9-205ENST00000600117 DAZ4Q86SG3 579 aaKnown RBP12.89□□□□□ -0.35
CCDC9-205ENST00000600117 GNB1LQ9BYB4 327 aa12.89□□□□□ -0.35
CCDC9-205ENST00000600117 DAZ3Q9NR90 486 aaKnown RBP12.89□□□□□ -0.35
CCDC9-205ENST00000600117 SMCO4Q9NRQ5 59 aa12.89□□□□□ -0.35
CCDC9-205ENST00000600117 D6R8Y8 96 aa12.88□□□□□ -0.35
CCDC9-205ENST00000600117 CKS2P33552 79 aa12.88□□□□□ -0.35
CCDC9-205ENST00000600117 COX19Q49B96 90 aa12.88□□□□□ -0.35
CCDC9-205ENST00000600117 SDHAF1A6NFY7 115 aa12.87□□□□□ -0.35
CCDC9-205ENST00000600117 HLA-DQA1P01909 254 aa12.87□□□□□ -0.35
CCDC9-205ENST00000600117 PPBPP02775 128 aa12.87□□□□□ -0.35
CCDC9-205ENST00000600117 NTM-AS1Q6ZSK4 140 aa12.87□□□□□ -0.35
CCDC9-205ENST00000600117 WFDC10BQ8IUB3 73 aa12.87□□□□□ -0.35
CCDC9-205ENST00000600117 PPP1R17O96001 155 aa12.86□□□□□ -0.35
CCDC9-205ENST00000600117 POLR2KP53803 58 aaKnown RBP12.86□□□□□ -0.35
CCDC9-205ENST00000600117 TMEM70Q9BUB7 260 aa12.86□□□□□ -0.35
CCDC9-205ENST00000600117 ST20Q9HBF5 79 aa12.86□□□□□ -0.35
CCDC9-205ENST00000600117 NPYP01303 97 aa12.85□□□□□ -0.35
CCDC9-205ENST00000600117 ORMDL3Q8N138 153 aa12.85□□□□□ -0.35
CCDC9-205ENST00000600117 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.85□□□□□ -0.35
CCDC9-205ENST00000600117 KRTAP4-5Q9BYR2 181 aa12.85□□□□□ -0.35
CCDC9-205ENST00000600117 HERC1Q15751 4861 aa12.84□□□□□ -0.35
CCDC9-205ENST00000600117 TRBV6-8A0A0A6YYG3 113 aa12.84□□□□□ -0.35
CCDC9-205ENST00000600117 ATP6V1G1O75348 118 aa12.84□□□□□ -0.35
CCDC9-205ENST00000600117 TNFRSF6BO95407 300 aa12.84□□□□□ -0.35
CCDC9-205ENST00000600117 SUMO2P61956 95 aaKnown RBP12.84□□□□□ -0.35
CCDC9-205ENST00000600117 TMEM97Q5BJF2 176 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms