RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 GYPEP15421 78 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 LINC00315P59091 139 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 Q0VG73 95 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 SLAQ13239 276 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 MRPL23Q16540 153 aaKnown RBP9.41□□□□□ -0.9
SCAF1-203ENST00000598359 LYPD5Q6UWN5 251 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 NDFIP1Q9BT67 221 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 TNFRSF18Q9Y5U5 241 aa9.41□□□□□ -0.9
SCAF1-203ENST00000598359 TRAV4A0A0B4J268 109 aa9.4□□□□□ -0.9
SCAF1-203ENST00000598359 SH2D1AO60880 128 aa9.4□□□□□ -0.9
SCAF1-203ENST00000598359 S100A2P29034 98 aa9.4□□□□□ -0.9
SCAF1-203ENST00000598359 HBBP68871 147 aa9.4□□□□□ -0.9
SCAF1-203ENST00000598359 OR10J3Q5JRS4 329 aa9.4□□□□□ -0.9
SCAF1-203ENST00000598359 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.9
SCAF1-203ENST00000598359 NEGR1Q7Z3B1 354 aa9.4□□□□□ -0.9
SCAF1-203ENST00000598359 OR4C5Q8NGB2 326 aa9.4□□□□□ -0.9
SCAF1-203ENST00000598359 HIST1H2BLQ99880 126 aa9.4□□□□□ -0.9
SCAF1-203ENST00000598359 A0A1B0GW15 77 aa9.39□□□□□ -0.91
SCAF1-203ENST00000598359 SRIP30626 198 aa9.39□□□□□ -0.91
SCAF1-203ENST00000598359 RPS20P60866 119 aaKnown RBP9.39□□□□□ -0.91
SCAF1-203ENST00000598359 DNLZQ5SXM8 178 aa9.39□□□□□ -0.91
SCAF1-203ENST00000598359 SPATA12Q7Z6I5 190 aa9.39□□□□□ -0.91
SCAF1-203ENST00000598359 KCNS1Q96KK3 526 aa9.39□□□□□ -0.91
SCAF1-203ENST00000598359 C12orf57Q99622 126 aa9.39□□□□□ -0.91
SCAF1-203ENST00000598359 APCSP02743 223 aa9.38□□□□□ -0.91
SCAF1-203ENST00000598359 KRTAP10-2P60368 255 aa9.38□□□□□ -0.91
SCAF1-203ENST00000598359 WFDC10BQ8IUB3 73 aa9.38□□□□□ -0.91
SCAF1-203ENST00000598359 DNAH5Q8TE73 4624 aa9.37□□□□□ -0.91
SCAF1-203ENST00000598359 IGHV3-73A0A0B4J1V6 119 aa9.37□□□□□ -0.91
SCAF1-203ENST00000598359 LINC00310P59036 64 aa9.37□□□□□ -0.91
SCAF1-203ENST00000598359 LINC01559Q495D7 138 aa9.37□□□□□ -0.91
SCAF1-203ENST00000598359 ZNF876PQ49A33 203 aa9.37□□□□□ -0.91
SCAF1-203ENST00000598359 Q6ZRN7 208 aaPredicted RBP9.37□□□□□ -0.91
SCAF1-203ENST00000598359 PGLYRP4Q96LB8 373 aa9.37□□□□□ -0.91
SCAF1-203ENST00000598359 PACRGQ96M98 296 aaPredicted RBP9.37□□□□□ -0.91
SCAF1-203ENST00000598359 A0A1B0GUT8 65 aa9.36□□□□□ -0.91
SCAF1-203ENST00000598359 FABP5P3A8MUU1 101 aa9.36□□□□□ -0.91
SCAF1-203ENST00000598359 IGLC6P0CF74 106 aa9.36□□□□□ -0.91
SCAF1-203ENST00000598359 FABP4P15090 132 aa9.36□□□□□ -0.91
SCAF1-203ENST00000598359 GATA1P15976 413 aaPredicted RBP9.36□□□□□ -0.91
SCAF1-203ENST00000598359 FUSP35637 526 aaKnown RBP eCLIP9.36□□□□□ -0.91
SCAF1-203ENST00000598359 CTRLP40313 264 aa9.36□□□□□ -0.91
SCAF1-203ENST00000598359 RAB4BP61018 213 aa9.36□□□□□ -0.91
SCAF1-203ENST00000598359 PDZD11Q5EBL8 140 aa9.36□□□□□ -0.91
SCAF1-203ENST00000598359 OR10D4PQ8NGN7 298 aa9.36□□□□□ -0.91
SCAF1-203ENST00000598359 TMEM18Q96B42 140 aa9.36□□□□□ -0.91
SCAF1-203ENST00000598359 GRIFINA4D1Z8 144 aa9.35□□□□□ -0.91
SCAF1-203ENST00000598359 ORM1P02763 201 aa9.35□□□□□ -0.91
SCAF1-203ENST00000598359 GZMBP10144 247 aa9.35□□□□□ -0.91
SCAF1-203ENST00000598359 RNASE3P12724 160 aaKnown RBP9.35□□□□□ -0.91
SCAF1-203ENST00000598359 RIGQ13278 110 aa9.35□□□□□ -0.91
SCAF1-203ENST00000598359 PYY3Q5JQD4 70 aa9.35□□□□□ -0.91
SCAF1-203ENST00000598359 CFAP126Q5VTH2 177 aa9.35□□□□□ -0.91
SCAF1-203ENST00000598359 C9orf85Q96MD7 179 aa9.35□□□□□ -0.91
SCAF1-203ENST00000598359 APOBP04114 4563 aaKnown RBP9.34□□□□□ -0.91
SCAF1-203ENST00000598359 IGKV3D-20A0A0C4DH25 116 aa9.34□□□□□ -0.91
SCAF1-203ENST00000598359 RS1O15537 224 aa9.34□□□□□ -0.91
SCAF1-203ENST00000598359 ARMS2P0C7Q2 107 aa9.34□□□□□ -0.91
SCAF1-203ENST00000598359 CAMPP49913 170 aa9.34□□□□□ -0.91
SCAF1-203ENST00000598359 DMRTA1Q5VZB9 504 aa9.34□□□□□ -0.91
SCAF1-203ENST00000598359 SLC25A29Q8N8R3 303 aa9.34□□□□□ -0.91
SCAF1-203ENST00000598359 ALKBH7Q9BT30 221 aaPredicted RBP9.34□□□□□ -0.91
SCAF1-203ENST00000598359 CNFNQ9BYD5 112 aa9.34□□□□□ -0.91
SCAF1-203ENST00000598359 NUPR1O60356 82 aa9.33□□□□□ -0.92
SCAF1-203ENST00000598359 SERF1AO75920 110 aa9.33□□□□□ -0.92
SCAF1-203ENST00000598359 BTF3P20290 206 aaKnown RBP9.33□□□□□ -0.92
SCAF1-203ENST00000598359 KIAA1644Q3SXP7 199 aa9.33□□□□□ -0.92
SCAF1-203ENST00000598359 C18orf32Q8TCD1 76 aa9.33□□□□□ -0.92
SCAF1-203ENST00000598359 BORCS7Q96B45 105 aa9.33□□□□□ -0.92
SCAF1-203ENST00000598359 DNAH10OSP0CZ25 163 aa9.32□□□□□ -0.92
SCAF1-203ENST00000598359 JOSD1Q15040 202 aaPredicted RBP9.32□□□□□ -0.92
SCAF1-203ENST00000598359 Q6ZSN1 163 aa9.32□□□□□ -0.92
SCAF1-203ENST00000598359 BAGE3Q86Y29 109 aa9.32□□□□□ -0.92
SCAF1-203ENST00000598359 F2Z2F3 143 aa9.31□□□□□ -0.92
SCAF1-203ENST00000598359 S100A4P26447 101 aaKnown RBP9.31□□□□□ -0.92
SCAF1-203ENST00000598359 S100A12P80511 92 aa9.31□□□□□ -0.92
SCAF1-203ENST00000598359 LYZL1Q6UWQ5 148 aa9.31□□□□□ -0.92
SCAF1-203ENST00000598359 MAPKAPK5-AS1Q8N8E1 139 aa9.31□□□□□ -0.92
SCAF1-203ENST00000598359 FER1L6-AS1Q8NA97 138 aa9.31□□□□□ -0.92
SCAF1-203ENST00000598359 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
SCAF1-203ENST00000598359 JPT2Q9H910 190 aa9.31□□□□□ -0.92
SCAF1-203ENST00000598359 TRAV9-2A0A087WT02 112 aa9.3□□□□□ -0.92
SCAF1-203ENST00000598359 H3BVH4 76 aa9.3□□□□□ -0.92
SCAF1-203ENST00000598359 CDK2AP2O75956 126 aa9.3□□□□□ -0.92
SCAF1-203ENST00000598359 CRYGDP07320 174 aa9.3□□□□□ -0.92
SCAF1-203ENST00000598359 EVI2AP22794 236 aa9.3□□□□□ -0.92
SCAF1-203ENST00000598359 ASIPP42127 132 aa9.3□□□□□ -0.92
SCAF1-203ENST00000598359 MSRB1Q9NZV6 116 aa9.3□□□□□ -0.92
SCAF1-203ENST00000598359 TMSB15BA0A087X1C1 80 aa9.29□□□□□ -0.92
SCAF1-203ENST00000598359 RHOHQ15669 191 aa9.29□□□□□ -0.92
SCAF1-203ENST00000598359 PTH2Q96A98 100 aa9.29□□□□□ -0.92
SCAF1-203ENST00000598359 PRADC1Q9BSG0 188 aa9.29□□□□□ -0.92
SCAF1-203ENST00000598359 SAMD10Q9BYL1 202 aa9.29□□□□□ -0.92
SCAF1-203ENST00000598359 NIT2Q9NQR4 276 aa9.29□□□□□ -0.92
SCAF1-203ENST00000598359 Q9UF83 564 aa9.29□□□□□ -0.92
SCAF1-203ENST00000598359 TRBV6-4A0A1B0GX49 114 aa9.28□□□□□ -0.92
SCAF1-203ENST00000598359 SNAI2O43623 268 aa9.28□□□□□ -0.92
SCAF1-203ENST00000598359 SH2D6Q7Z4S9 175 aa9.28□□□□□ -0.92
SCAF1-203ENST00000598359 IGHV3-38A0A0C4DH36 116 aa9.27□□□□□ -0.93
SCAF1-203ENST00000598359 GAGE12JA6NER3 117 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 173.3 ms