RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 NSUN5P1Q3KNT7 163 aa12.91□□□□□ -0.34
ARHGEF1-213ENST00000595897 SPG11Q96JI7 2443 aa12.91□□□□□ -0.34
ARHGEF1-213ENST00000595897 RHODO00212 210 aa12.91□□□□□ -0.34
ARHGEF1-213ENST00000595897 C9orf85Q96MD7 179 aa12.91□□□□□ -0.34
ARHGEF1-213ENST00000595897 ZNF22P17026 224 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF1-213ENST00000595897 BEX4Q9NWD9 120 aaPredicted RBP12.9□□□□□ -0.34
ARHGEF1-213ENST00000595897 SORL1Q92673 2214 aa12.9□□□□□ -0.34
ARHGEF1-213ENST00000595897 P0DMU3 169 aa12.9□□□□□ -0.34
ARHGEF1-213ENST00000595897 FAM231AP0DMU4 169 aa12.9□□□□□ -0.34
ARHGEF1-213ENST00000595897 FAM231CP0DMU5 169 aa12.9□□□□□ -0.34
ARHGEF1-213ENST00000595897 UCNP55089 124 aa12.9□□□□□ -0.34
ARHGEF1-213ENST00000595897 C20orf203Q8NBC4 194 aa12.9□□□□□ -0.34
ARHGEF1-213ENST00000595897 TMEM263Q8WUH6 116 aaKnown RBP12.9□□□□□ -0.34
ARHGEF1-213ENST00000595897 BRI3O95415 125 aa12.9□□□□□ -0.35
ARHGEF1-213ENST00000595897 SNRPD3P62318 126 aaKnown RBP12.9□□□□□ -0.35
ARHGEF1-213ENST00000595897 SPINK13Q1W4C9 94 aa12.9□□□□□ -0.35
ARHGEF1-213ENST00000595897 ABCA2Q9BZC7 2435 aa12.9□□□□□ -0.35
ARHGEF1-213ENST00000595897 IGHV4-61A0A0C4DH41 118 aa12.89□□□□□ -0.35
ARHGEF1-213ENST00000595897 I3L3M4 83 aa12.89□□□□□ -0.35
ARHGEF1-213ENST00000595897 SPXQ9BT56 116 aa12.89□□□□□ -0.35
ARHGEF1-213ENST00000595897 A6NDX4 124 aa12.89□□□□□ -0.35
ARHGEF1-213ENST00000595897 ZNF580Q9UK33 172 aa12.89□□□□□ -0.35
ARHGEF1-213ENST00000595897 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF1-213ENST00000595897 A0A0B4J2C4 111 aa12.88□□□□□ -0.35
ARHGEF1-213ENST00000595897 ADARB2-AS1A8MUL3 147 aa12.88□□□□□ -0.35
ARHGEF1-213ENST00000595897 K7EMT4 169 aa12.88□□□□□ -0.35
ARHGEF1-213ENST00000595897 IGLV1-40P01703 118 aa12.88□□□□□ -0.35
ARHGEF1-213ENST00000595897 PRSS2P07478 247 aa12.88□□□□□ -0.35
ARHGEF1-213ENST00000595897 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
ARHGEF1-213ENST00000595897 EIF4EBP3O60516 100 aaPredicted RBP12.88□□□□□ -0.35
ARHGEF1-213ENST00000595897 TMEM95Q3KNT9 176 aa12.88□□□□□ -0.35
ARHGEF1-213ENST00000595897 IGLV4-3A0A075B6K6 122 aa12.87□□□□□ -0.35
ARHGEF1-213ENST00000595897 HTN1P15515 57 aa12.87□□□□□ -0.35
ARHGEF1-213ENST00000595897 ZFAND6Q6FIF0 208 aa12.87□□□□□ -0.35
ARHGEF1-213ENST00000595897 TEX29Q8N6K0 151 aa12.87□□□□□ -0.35
ARHGEF1-213ENST00000595897 ANAPC13Q9BS18 74 aa12.87□□□□□ -0.35
ARHGEF1-213ENST00000595897 CSPG4Q6UVK1 2322 aa12.87□□□□□ -0.35
ARHGEF1-213ENST00000595897 PIMREGQ9BSJ6 248 aa12.87□□□□□ -0.35
ARHGEF1-213ENST00000595897 A0A0J9YX75 114 aa12.86□□□□□ -0.35
ARHGEF1-213ENST00000595897 ATXN8Q156A1 80 aa12.86□□□□□ -0.35
ARHGEF1-213ENST00000595897 CD28P10747 220 aa12.86□□□□□ -0.35
ARHGEF1-213ENST00000595897 NTN5Q8WTR8 489 aaPredicted RBP12.86□□□□□ -0.35
ARHGEF1-213ENST00000595897 RNF183Q96D59 192 aa12.86□□□□□ -0.35
ARHGEF1-213ENST00000595897 A0A0J9YXY3 114 aa12.85□□□□□ -0.35
ARHGEF1-213ENST00000595897 IGHV3-73A0A0B4J1V6 119 aa12.85□□□□□ -0.35
ARHGEF1-213ENST00000595897 ELANEP08246 267 aa12.85□□□□□ -0.35
ARHGEF1-213ENST00000595897 TIMM21Q9BVV7 248 aa12.85□□□□□ -0.35
ARHGEF1-213ENST00000595897 C19orf84I3L1E1 186 aa12.84□□□□□ -0.35
ARHGEF1-213ENST00000595897 IGHV3-30-3P0DP02 117 aa12.84□□□□□ -0.35
ARHGEF1-213ENST00000595897 VPS13CQ709C8 3753 aa12.84□□□□□ -0.35
ARHGEF1-213ENST00000595897 ODF3Q96PU9 254 aa12.84□□□□□ -0.35
ARHGEF1-213ENST00000595897 NCOR2Q9Y618 2525 aa12.84□□□□□ -0.35
ARHGEF1-213ENST00000595897 M0R2P5 195 aa12.84□□□□□ -0.35
ARHGEF1-213ENST00000595897 LINC01620Q4KN68 170 aa12.84□□□□□ -0.35
ARHGEF1-213ENST00000595897 RNASE13Q5GAN3 156 aaKnown RBP12.83□□□□□ -0.36
ARHGEF1-213ENST00000595897 TRAV8-3A0A0A6YYJ7 113 aa12.82□□□□□ -0.36
ARHGEF1-213ENST00000595897 SNCGO76070 127 aa12.82□□□□□ -0.36
ARHGEF1-213ENST00000595897 CEMP1Q6PRD7 247 aaPredicted RBP12.82□□□□□ -0.36
ARHGEF1-213ENST00000595897 LY6DQ14210 128 aa12.82□□□□□ -0.36
ARHGEF1-213ENST00000595897 DOPEY2Q9Y3R5 2298 aa12.82□□□□□ -0.36
ARHGEF1-213ENST00000595897 TRIAP1O43715 76 aa12.81□□□□□ -0.36
ARHGEF1-213ENST00000595897 C10orf99Q6UWK7 81 aa12.81□□□□□ -0.36
ARHGEF1-213ENST00000595897 CHD8Q9HCK8 2581 aa12.81□□□□□ -0.36
ARHGEF1-213ENST00000595897 TEX49A0A1B0GTD5 131 aa12.81□□□□□ -0.36
ARHGEF1-213ENST00000595897 M0QXV9 152 aa12.81□□□□□ -0.36
ARHGEF1-213ENST00000595897 CFHR3Q02985 330 aa12.81□□□□□ -0.36
ARHGEF1-213ENST00000595897 TRGV11A0A075B6L2 103 aa12.8□□□□□ -0.36
ARHGEF1-213ENST00000595897 NPC2P61916 151 aa12.8□□□□□ -0.36
ARHGEF1-213ENST00000595897 K7EQG2 157 aa12.8□□□□□ -0.36
ARHGEF1-213ENST00000595897 SYNJ2BPP57105 145 aa12.8□□□□□ -0.36
ARHGEF1-213ENST00000595897 GAGE2BQ13066 116 aa12.8□□□□□ -0.36
ARHGEF1-213ENST00000595897 GAGE2EQ4V326 116 aa12.8□□□□□ -0.36
ARHGEF1-213ENST00000595897 GAGE2DQ9UEU5 116 aa12.8□□□□□ -0.36
ARHGEF1-213ENST00000595897 NDUFA12Q9UI09 145 aa12.79□□□□□ -0.36
ARHGEF1-213ENST00000595897 PSMB8P28062 276 aa12.79□□□□□ -0.36
ARHGEF1-213ENST00000595897 DUX5Q96PT3 197 aa12.79□□□□□ -0.36
ARHGEF1-213ENST00000595897 TNFRSF18Q9Y5U5 241 aa12.79□□□□□ -0.36
ARHGEF1-213ENST00000595897 TRBV30A0A0K0K1B3 111 aa12.78□□□□□ -0.36
ARHGEF1-213ENST00000595897 PROK1P58294 105 aa12.78□□□□□ -0.36
ARHGEF1-213ENST00000595897 MSMBP08118 114 aa12.78□□□□□ -0.36
ARHGEF1-213ENST00000595897 GATA3P23771 443 aa12.78□□□□□ -0.36
ARHGEF1-213ENST00000595897 C10orf105Q8TEF2 133 aa12.78□□□□□ -0.36
ARHGEF1-213ENST00000595897 CCL19Q99731 98 aa12.78□□□□□ -0.36
ARHGEF1-213ENST00000595897 TRBV10-2A0A0K0K1G8 114 aa12.78□□□□□ -0.36
ARHGEF1-213ENST00000595897 COX6CP09669 75 aa12.78□□□□□ -0.36
ARHGEF1-213ENST00000595897 TRAV8-4A0A0B4J246 113 aa12.77□□□□□ -0.36
ARHGEF1-213ENST00000595897 MRPS36P82909 103 aaKnown RBP12.77□□□□□ -0.36
ARHGEF1-213ENST00000595897 C2orf82Q6UX34 121 aa12.77□□□□□ -0.36
ARHGEF1-213ENST00000595897 CITED1Q99966 193 aa12.77□□□□□ -0.36
ARHGEF1-213ENST00000595897 PRRC2AP48634 2157 aaKnown RBP12.77□□□□□ -0.37
ARHGEF1-213ENST00000595897 TRAV4A0A0B4J268 109 aa12.77□□□□□ -0.37
ARHGEF1-213ENST00000595897 IGHV1-58A0A0C4DH39 117 aa12.77□□□□□ -0.37
ARHGEF1-213ENST00000595897 KNCNA6PVL3 124 aa12.77□□□□□ -0.37
ARHGEF1-213ENST00000595897 ATP5J2P56134 94 aa12.77□□□□□ -0.37
ARHGEF1-213ENST00000595897 ADAMTSL4-AS1Q5T5F5 129 aa12.77□□□□□ -0.37
ARHGEF1-213ENST00000595897 PYGO1Q9Y3Y4 419 aa12.77□□□□□ -0.37
ARHGEF1-213ENST00000595897 IGHV4-30-2A0A087WSY4 118 aa12.76□□□□□ -0.37
ARHGEF1-213ENST00000595897 LITAFQ99732 161 aa12.76□□□□□ -0.37
ARHGEF1-213ENST00000595897 ICOSQ9Y6W8 199 aa12.76□□□□□ -0.37
ARHGEF1-213ENST00000595897 A8MZ25 164 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms