RNA–Protein interactions for RNA: ENST00000588030.5

CIRBP-215, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CIRBP, Length 1,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-215ENST00000588030 LINC01556Q5JQF7 62 aa13.39□□□□□ -0.27
CIRBP-215ENST00000588030 A0A087WWC5 75 aa13.39□□□□□ -0.27
CIRBP-215ENST00000588030 RPL23P62829 140 aaKnown RBP13.39□□□□□ -0.27
CIRBP-215ENST00000588030 SUMO4Q6EEV6 95 aa13.39□□□□□ -0.27
CIRBP-215ENST00000588030 WDR73Q6P4I2 378 aa13.39□□□□□ -0.27
CIRBP-215ENST00000588030 Q8N3U1 123 aa13.39□□□□□ -0.27
CIRBP-215ENST00000588030 C10orf126Q8N4M7 172 aa13.39□□□□□ -0.27
CIRBP-215ENST00000588030 OR10G8Q8NGN5 311 aa13.39□□□□□ -0.27
CIRBP-215ENST00000588030 DPH3P1Q9H4G8 78 aa13.39□□□□□ -0.27
CIRBP-215ENST00000588030 NAT8Q9UHE5 227 aa13.39□□□□□ -0.27
CIRBP-215ENST00000588030 LRP1BQ9NZR2 4599 aa13.38□□□□□ -0.27
CIRBP-215ENST00000588030 CT83Q5H943 113 aa13.38□□□□□ -0.27
CIRBP-215ENST00000588030 C15orf54Q8N8G6 183 aa13.38□□□□□ -0.27
CIRBP-215ENST00000588030 ISOC2Q96AB3 205 aa13.38□□□□□ -0.27
CIRBP-215ENST00000588030 CNFNQ9BYD5 112 aa13.38□□□□□ -0.27
CIRBP-215ENST00000588030 SMDT1Q9H4I9 107 aa13.38□□□□□ -0.27
CIRBP-215ENST00000588030 OSTCQ9NRP0 149 aa13.38□□□□□ -0.27
CIRBP-215ENST00000588030 RYR1P21817 5038 aa13.37□□□□□ -0.27
CIRBP-215ENST00000588030 K7EP13 123 aa13.36□□□□□ -0.27
CIRBP-215ENST00000588030 M0QY20 66 aa13.36□□□□□ -0.27
CIRBP-215ENST00000588030 TSKUQ8WUA8 353 aa13.36□□□□□ -0.27
CIRBP-215ENST00000588030 HIGD1CA8MV81 97 aa13.35□□□□□ -0.27
CIRBP-215ENST00000588030 H7C1H1 209 aa13.35□□□□□ -0.27
CIRBP-215ENST00000588030 FOXA3P55318 350 aaPredicted RBP13.35□□□□□ -0.27
CIRBP-215ENST00000588030 Q6ZRN7 208 aaPredicted RBP13.35□□□□□ -0.27
CIRBP-215ENST00000588030 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.35□□□□□ -0.27
CIRBP-215ENST00000588030 BORCS7Q96B45 105 aa13.35□□□□□ -0.27
CIRBP-215ENST00000588030 Q9HAA7 133 aa13.35□□□□□ -0.27
CIRBP-215ENST00000588030 SMIM15Q7Z3B0 74 aa13.34□□□□□ -0.27
CIRBP-215ENST00000588030 NFE4Q86UQ8 179 aa13.34□□□□□ -0.27
CIRBP-215ENST00000588030 V9GYV3 84 aa13.34□□□□□ -0.27
CIRBP-215ENST00000588030 URGCP-MRPS24S4R325 110 aa13.34□□□□□ -0.27
CIRBP-215ENST00000588030 TRAV26-2A0A0B4J265 109 aa13.33□□□□□ -0.28
CIRBP-215ENST00000588030 RASL11AQ6T310 242 aa13.33□□□□□ -0.28
CIRBP-215ENST00000588030 GFRA4Q9GZZ7 299 aa13.33□□□□□ -0.28
CIRBP-215ENST00000588030 TRBV6-8A0A0A6YYG3 113 aa13.32□□□□□ -0.28
CIRBP-215ENST00000588030 C16orf90A8MZG2 172 aa13.32□□□□□ -0.28
CIRBP-215ENST00000588030 IBA57-AS1B1ANH7 110 aa13.32□□□□□ -0.28
CIRBP-215ENST00000588030 DAZ4Q86SG3 579 aaKnown RBP13.32□□□□□ -0.28
CIRBP-215ENST00000588030 DAZ3Q9NR90 486 aaKnown RBP13.32□□□□□ -0.28
CIRBP-215ENST00000588030 DNAH5Q8TE73 4624 aa13.31□□□□□ -0.28
CIRBP-215ENST00000588030 TMEM262E9PQX1 116 aa13.31□□□□□ -0.28
CIRBP-215ENST00000588030 SPATA12Q7Z6I5 190 aa13.31□□□□□ -0.28
CIRBP-215ENST00000588030 NIT1Q86X76 327 aa13.31□□□□□ -0.28
CIRBP-215ENST00000588030 DNAJC30Q96LL9 226 aa13.31□□□□□ -0.28
CIRBP-215ENST00000588030 A0A1B0GUT8 65 aa13.3□□□□□ -0.28
CIRBP-215ENST00000588030 CLLU1Q5K131 121 aa13.3□□□□□ -0.28
CIRBP-215ENST00000588030 DEFB104AQ8WTQ1 72 aa13.3□□□□□ -0.28
CIRBP-215ENST00000588030 A0A087WX48 190 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 FAM231BA6NCW3 169 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 KRTAP10-2P60368 255 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 KCNIP4Q6PIL6 250 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 GATD1Q8NB37 220 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 NIT2Q9NQR4 276 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 PSCAO43653 123 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 NTM-AS1Q6ZSK4 140 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 NUP35Q8NFH5 326 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 CHCHD5Q9BSY4 110 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 KRTAP17-1Q9BYP8 105 aa13.29□□□□□ -0.28
CIRBP-215ENST00000588030 NAT8BQ9UHF3 227 aa13.28□□□□□ -0.28
CIRBP-215ENST00000588030 HSPG2P98160 4391 aa13.27□□□□□ -0.28
CIRBP-215ENST00000588030 KLK12Q9UKR0 248 aa13.27□□□□□ -0.29
CIRBP-215ENST00000588030 TMEM97Q5BJF2 176 aa13.26□□□□□ -0.29
CIRBP-215ENST00000588030 RPL39LQ96EH5 51 aaKnown RBP13.26□□□□□ -0.29
CIRBP-215ENST00000588030 TRBV25-1A0A075B6N4 114 aa13.25□□□□□ -0.29
CIRBP-215ENST00000588030 RIGQ13278 110 aa13.25□□□□□ -0.29
CIRBP-215ENST00000588030 LAGE3Q14657 143 aa13.25□□□□□ -0.29
CIRBP-215ENST00000588030 EREGO14944 169 aa13.24□□□□□ -0.29
CIRBP-215ENST00000588030 MPV17L2Q567V2 206 aa13.24□□□□□ -0.29
CIRBP-215ENST00000588030 APOBP04114 4563 aaKnown RBP13.24□□□□□ -0.29
CIRBP-215ENST00000588030 SMIM27A0A1W2PRY6 76 aa13.23□□□□□ -0.29
CIRBP-215ENST00000588030 FUSP35637 526 aaKnown RBP eCLIP13.23□□□□□ -0.29
CIRBP-215ENST00000588030 GAGE6Q13070 117 aa13.23□□□□□ -0.29
CIRBP-215ENST00000588030 SLC7A5P1Q8MH63 180 aa13.23□□□□□ -0.29
CIRBP-215ENST00000588030 TMEM191AQ9H0A3 160 aa13.23□□□□□ -0.29
CIRBP-215ENST00000588030 A0A087WTM6 91 aa13.23□□□□□ -0.29
CIRBP-215ENST00000588030 TRAV8-3A0A0A6YYJ7 113 aa13.23□□□□□ -0.29
CIRBP-215ENST00000588030 IGHV1-24A0A0C4DH33 117 aa13.23□□□□□ -0.29
CIRBP-215ENST00000588030 AMN1Q8IY45 258 aa13.23□□□□□ -0.29
CIRBP-215ENST00000588030 UBE2WQ96B02 151 aa13.23□□□□□ -0.29
CIRBP-215ENST00000588030 CHCHD7Q9BUK0 85 aa13.23□□□□□ -0.29
CIRBP-215ENST00000588030 Q8N976 141 aa13.22□□□□□ -0.29
CIRBP-215ENST00000588030 GAS8-AS1O95177 125 aa13.21□□□□□ -0.29
CIRBP-215ENST00000588030 ANGP03950 147 aaKnown RBP13.21□□□□□ -0.29
CIRBP-215ENST00000588030 CAMPP49913 170 aa13.21□□□□□ -0.29
CIRBP-215ENST00000588030 ELOBQ15370 118 aa13.21□□□□□ -0.29
CIRBP-215ENST00000588030 IQCJQ1A5X6 159 aa13.21□□□□□ -0.29
CIRBP-215ENST00000588030 FRZBQ92765 325 aa13.21□□□□□ -0.29
CIRBP-215ENST00000588030 PCLOQ9Y6V0 5065 aa13.21□□□□□ -0.3
CIRBP-215ENST00000588030 CDK2AP2O75956 126 aa13.2□□□□□ -0.3
CIRBP-215ENST00000588030 COTL1Q14019 142 aa13.2□□□□□ -0.3
CIRBP-215ENST00000588030 ATRAIDQ6UW56 229 aa13.2□□□□□ -0.3
CIRBP-215ENST00000588030 RNF185Q96GF1 192 aa13.2□□□□□ -0.3
CIRBP-215ENST00000588030 TM2D2Q9BX73 214 aa13.2□□□□□ -0.3
CIRBP-215ENST00000588030 RAB4AP20338 218 aa13.19□□□□□ -0.3
CIRBP-215ENST00000588030 MRPL54Q6P161 138 aaKnown RBP13.19□□□□□ -0.3
CIRBP-215ENST00000588030 TMEM243Q9BU79 118 aa13.19□□□□□ -0.3
CIRBP-215ENST00000588030 IGKV2D-24A0A075B6R9 120 aa13.18□□□□□ -0.3
CIRBP-215ENST00000588030 AMTP48728 403 aa13.18□□□□□ -0.3
CIRBP-215ENST00000588030 PKIAP61925 76 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms