RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 NDUFA11Q86Y39 141 aa10.5□□□□□ -0.73
CDK5RAP3-237ENST00000585163 AMELXQ99217 191 aa10.5□□□□□ -0.73
CDK5RAP3-237ENST00000585163 IGHV3-30P01768 117 aa10.5□□□□□ -0.73
CDK5RAP3-237ENST00000585163 IGHV3-30-5P0DP03 117 aa10.5□□□□□ -0.73
CDK5RAP3-237ENST00000585163 UBE2D3P61077 147 aa10.5□□□□□ -0.73
CDK5RAP3-237ENST00000585163 UBE2D2P62837 147 aa10.5□□□□□ -0.73
CDK5RAP3-237ENST00000585163 CSPG4Q6UVK1 2322 aa10.49□□□□□ -0.73
CDK5RAP3-237ENST00000585163 J3QQQ9 107 aa10.49□□□□□ -0.73
CDK5RAP3-237ENST00000585163 APOMO95445 188 aa10.49□□□□□ -0.73
CDK5RAP3-237ENST00000585163 P0DMU3 169 aa10.49□□□□□ -0.73
CDK5RAP3-237ENST00000585163 FAM231AP0DMU4 169 aa10.49□□□□□ -0.73
CDK5RAP3-237ENST00000585163 FAM231CP0DMU5 169 aa10.49□□□□□ -0.73
CDK5RAP3-237ENST00000585163 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
CDK5RAP3-237ENST00000585163 C5orf47Q569G3 176 aa10.49□□□□□ -0.73
CDK5RAP3-237ENST00000585163 SPATA25Q9BR10 227 aa10.49□□□□□ -0.73
CDK5RAP3-237ENST00000585163 SYNJ2BPP57105 145 aa10.48□□□□□ -0.73
CDK5RAP3-237ENST00000585163 RNF152Q8N8N0 203 aa10.48□□□□□ -0.73
CDK5RAP3-237ENST00000585163 OPRPNQ99935 248 aaPredicted RBP10.48□□□□□ -0.73
CDK5RAP3-237ENST00000585163 LOC107984156A0A0G2JMH3 177 aa10.48□□□□□ -0.73
CDK5RAP3-237ENST00000585163 WIPF1O43516 503 aa10.48□□□□□ -0.73
CDK5RAP3-237ENST00000585163 ARL17AQ8IVW1 177 aa10.48□□□□□ -0.73
CDK5RAP3-237ENST00000585163 C20orf203Q8NBC4 194 aa10.48□□□□□ -0.73
CDK5RAP3-237ENST00000585163 SMCPP49901 116 aaPredicted RBP10.47□□□□□ -0.73
CDK5RAP3-237ENST00000585163 INSL3P51460 131 aa10.47□□□□□ -0.73
CDK5RAP3-237ENST00000585163 I3L3M4 83 aa10.47□□□□□ -0.73
CDK5RAP3-237ENST00000585163 M0QXV9 152 aa10.47□□□□□ -0.73
CDK5RAP3-237ENST00000585163 CFC1BP0CG36 223 aa10.47□□□□□ -0.73
CDK5RAP3-237ENST00000585163 CFC1P0CG37 223 aa10.47□□□□□ -0.73
CDK5RAP3-237ENST00000585163 LGALS3P17931 250 aaKnown RBP10.47□□□□□ -0.73
CDK5RAP3-237ENST00000585163 DSCR9P59020 149 aa10.47□□□□□ -0.73
CDK5RAP3-237ENST00000585163 TMEM223A0PJW6 202 aa10.46□□□□□ -0.73
CDK5RAP3-237ENST00000585163 PSMB2P49721 201 aa10.46□□□□□ -0.73
CDK5RAP3-237ENST00000585163 LYRM7Q5U5X0 104 aa10.46□□□□□ -0.73
CDK5RAP3-237ENST00000585163 SFTA2Q6UW10 78 aa10.46□□□□□ -0.73
CDK5RAP3-237ENST00000585163 ATP6V0E2Q8NHE4 81 aa10.46□□□□□ -0.74
CDK5RAP3-237ENST00000585163 CFAP46Q8IYW2 2715 aa10.46□□□□□ -0.74
CDK5RAP3-237ENST00000585163 TRGV11A0A075B6L2 103 aa10.45□□□□□ -0.74
CDK5RAP3-237ENST00000585163 LEPROTO15243 131 aa10.45□□□□□ -0.74
CDK5RAP3-237ENST00000585163 GAGE5Q13069 117 aa10.45□□□□□ -0.74
CDK5RAP3-237ENST00000585163 GAGE6Q13070 117 aa10.45□□□□□ -0.74
CDK5RAP3-237ENST00000585163 C10orf126Q8N4M7 172 aa10.45□□□□□ -0.74
CDK5RAP3-237ENST00000585163 LINC01356Q8N9X3 169 aa10.45□□□□□ -0.74
CDK5RAP3-237ENST00000585163 C1QTNF4Q9BXJ3 329 aa10.45□□□□□ -0.74
CDK5RAP3-237ENST00000585163 FOXI1Q12951 378 aa10.45□□□□□ -0.74
CDK5RAP3-237ENST00000585163 DOPEY1Q5JWR5 2465 aa10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 PKD1L2Q7Z442 2459 aa10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 HOXD3P31249 432 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 NRGNQ92686 78 aa10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 DUX5Q96PT3 197 aa10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 IGLV4-3A0A075B6K6 122 aa10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 RHODO00212 210 aa10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 ELANEP08246 267 aa10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 ZNF22P17026 224 aaPredicted RBP10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 EDA2RQ9HAV5 297 aa10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 DOPEY2Q9Y3R5 2298 aa10.44□□□□□ -0.74
CDK5RAP3-237ENST00000585163 UBE2E2Q96LR5 201 aa10.43□□□□□ -0.74
CDK5RAP3-237ENST00000585163 PRO1854Q9UHT4 67 aa10.43□□□□□ -0.74
CDK5RAP3-237ENST00000585163 SORL1Q92673 2214 aa10.43□□□□□ -0.74
CDK5RAP3-237ENST00000585163 TRBV20-1A0A075B6N2 111 aa10.43□□□□□ -0.74
CDK5RAP3-237ENST00000585163 RBMY1A1P0DJD3 496 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-237ENST00000585163 RBMY1CP0DJD4 496 aa10.43□□□□□ -0.74
CDK5RAP3-237ENST00000585163 RBMY1FQ15415 496 aaKnown RBP10.43□□□□□ -0.74
CDK5RAP3-237ENST00000585163 VPREB3Q9UKI3 123 aa10.43□□□□□ -0.74
CDK5RAP3-237ENST00000585163 FLNCQ14315 2725 aa10.43□□□□□ -0.74
CDK5RAP3-237ENST00000585163 CSMD2Q7Z408 3487 aa10.42□□□□□ -0.74
CDK5RAP3-237ENST00000585163 J3QLI3 93 aa10.42□□□□□ -0.74
CDK5RAP3-237ENST00000585163 TCL1BO95988 128 aa10.42□□□□□ -0.74
CDK5RAP3-237ENST00000585163 A0A096LNT2 108 aa10.42□□□□□ -0.74
CDK5RAP3-237ENST00000585163 A0A0J9YXV3 536 aa10.42□□□□□ -0.74
CDK5RAP3-237ENST00000585163 ZNF418Q8TF45 676 aaPredicted RBP10.41□□□□□ -0.74
CDK5RAP3-237ENST00000585163 ERG28Q9UKR5 140 aa10.41□□□□□ -0.74
CDK5RAP3-237ENST00000585163 PYGO1Q9Y3Y4 419 aa10.41□□□□□ -0.74
CDK5RAP3-237ENST00000585163 ZNF702PQ9H963 129 aa10.41□□□□□ -0.74
CDK5RAP3-237ENST00000585163 USP9XQ93008 2570 aaPredicted RBP10.4□□□□□ -0.74
CDK5RAP3-237ENST00000585163 IGHV3-64A0A075B6Q5 118 aa10.4□□□□□ -0.75
CDK5RAP3-237ENST00000585163 SBSPONQ8IVN8 264 aa10.4□□□□□ -0.75
CDK5RAP3-237ENST00000585163 FAM104AQ969W3 186 aa10.4□□□□□ -0.75
CDK5RAP3-237ENST00000585163 KNCNA6PVL3 124 aa10.39□□□□□ -0.75
CDK5RAP3-237ENST00000585163 A8MTW9 85 aa10.39□□□□□ -0.75
CDK5RAP3-237ENST00000585163 RNF183Q96D59 192 aa10.39□□□□□ -0.75
CDK5RAP3-237ENST00000585163 EIF4EBP3O60516 100 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-237ENST00000585163 HTN1P15515 57 aa10.39□□□□□ -0.75
CDK5RAP3-237ENST00000585163 Q6YL49 198 aa10.39□□□□□ -0.75
CDK5RAP3-237ENST00000585163 TEN1Q86WV5 123 aa10.39□□□□□ -0.75
CDK5RAP3-237ENST00000585163 PTH2Q96A98 100 aa10.39□□□□□ -0.75
CDK5RAP3-237ENST00000585163 IGHV3-73A0A0B4J1V6 119 aa10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 PROK1P58294 105 aa10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 MRPS36P82909 103 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 TRAV2A0A0B4J234 112 aa10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 A0A0B4J2C4 111 aa10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 SCGB1C2P0DMR2 95 aa10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 CD28P10747 220 aa10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 DEFB131AP59861 70 aa10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 MUSTN1Q8IVN3 82 aa10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 MAPK1IP1LQ8NDC0 245 aa10.38□□□□□ -0.75
CDK5RAP3-237ENST00000585163 H3BMM0 161 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 M0R2P5 195 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 IGHV3-33P01772 117 aa10.37□□□□□ -0.75
CDK5RAP3-237ENST00000585163 PPDPFLQ8WWR9 84 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms