RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 KRTAP1-5Q9BYS1 174 aa16.18■□□□□ 0.18
ERBB2-209ENST00000578709 A0A087WWC5 75 aa16.17■□□□□ 0.18
ERBB2-209ENST00000578709 TRAV8-6A0A0B4J262 113 aa16.17■□□□□ 0.18
ERBB2-209ENST00000578709 DNAH10OSP0CZ25 163 aa16.17■□□□□ 0.18
ERBB2-209ENST00000578709 RIGQ13278 110 aa16.17■□□□□ 0.18
ERBB2-209ENST00000578709 DNAJC30Q96LL9 226 aa16.17■□□□□ 0.18
ERBB2-209ENST00000578709 SEC11CQ9BY50 192 aa16.17■□□□□ 0.18
ERBB2-209ENST00000578709 F8W036 122 aa16.16■□□□□ 0.18
ERBB2-209ENST00000578709 MT-ND4LP03901 98 aa16.16■□□□□ 0.18
ERBB2-209ENST00000578709 OR10J3Q5JRS4 329 aa16.16■□□□□ 0.18
ERBB2-209ENST00000578709 RASL11AQ6T310 242 aa16.16■□□□□ 0.18
ERBB2-209ENST00000578709 TMEM191AQ9H0A3 160 aa16.16■□□□□ 0.18
ERBB2-209ENST00000578709 FRAS1Q86XX4 4008 aa16.16■□□□□ 0.18
ERBB2-209ENST00000578709 ANAPC16Q96DE5 110 aa16.15■□□□□ 0.18
ERBB2-209ENST00000578709 IGHV3-38A0A0C4DH36 116 aa16.14■□□□□ 0.17
ERBB2-209ENST00000578709 C1orf134Q5TEV5 83 aa16.14■□□□□ 0.17
ERBB2-209ENST00000578709 GATD1Q8NB37 220 aa16.14■□□□□ 0.17
ERBB2-209ENST00000578709 TNFRSF18Q9Y5U5 241 aa16.14■□□□□ 0.17
ERBB2-209ENST00000578709 DNAH2Q9P225 4427 aa16.14■□□□□ 0.17
ERBB2-209ENST00000578709 K7EP13 123 aa16.13■□□□□ 0.17
ERBB2-209ENST00000578709 DAZ4Q86SG3 579 aaKnown RBP16.13■□□□□ 0.17
ERBB2-209ENST00000578709 FRZBQ92765 325 aa16.13■□□□□ 0.17
ERBB2-209ENST00000578709 NIT2Q9NQR4 276 aa16.13■□□□□ 0.17
ERBB2-209ENST00000578709 DAZ3Q9NR90 486 aaKnown RBP16.13■□□□□ 0.17
ERBB2-209ENST00000578709 TRAV26-2A0A0B4J265 109 aa16.12■□□□□ 0.17
ERBB2-209ENST00000578709 A0A1B0GW15 77 aa16.12■□□□□ 0.17
ERBB2-209ENST00000578709 RTL8CO15255 209 aa16.12■□□□□ 0.17
ERBB2-209ENST00000578709 BTF3P20290 206 aaKnown RBP16.12■□□□□ 0.17
ERBB2-209ENST00000578709 LINC01556Q5JQF7 62 aa16.12■□□□□ 0.17
ERBB2-209ENST00000578709 C10orf91Q5T1B1 145 aa16.11■□□□□ 0.17
ERBB2-209ENST00000578709 C6orf223Q8N319 242 aa16.11■□□□□ 0.17
ERBB2-209ENST00000578709 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.11■□□□□ 0.17
ERBB2-209ENST00000578709 TRAV9-2A0A087WT02 112 aa16.1■□□□□ 0.17
ERBB2-209ENST00000578709 RNF185Q96GF1 192 aa16.1■□□□□ 0.17
ERBB2-209ENST00000578709 TRBV6-8A0A0A6YYG3 113 aa16.08■□□□□ 0.16
ERBB2-209ENST00000578709 A0A1B0GXF2 115 aa16.08■□□□□ 0.16
ERBB2-209ENST00000578709 RAB4AP20338 218 aa16.08■□□□□ 0.16
ERBB2-209ENST00000578709 TMEM97Q5BJF2 176 aa16.08■□□□□ 0.16
ERBB2-209ENST00000578709 LINC00336Q6ZUF6 198 aa16.08■□□□□ 0.16
ERBB2-209ENST00000578709 CARHSP1Q9Y2V2 147 aaKnown RBP16.08■□□□□ 0.16
ERBB2-209ENST00000578709 DNAH17Q9UFH2 4485 aa16.08■□□□□ 0.16
ERBB2-209ENST00000578709 AMN1Q8IY45 258 aa16.07■□□□□ 0.16
ERBB2-209ENST00000578709 C10orf126Q8N4M7 172 aa16.07■□□□□ 0.16
ERBB2-209ENST00000578709 S100A8P05109 93 aa16.06■□□□□ 0.16
ERBB2-209ENST00000578709 CAMPP49913 170 aa16.06■□□□□ 0.16
ERBB2-209ENST00000578709 HBBP68871 147 aa16.06■□□□□ 0.16
ERBB2-209ENST00000578709 MRPL54Q6P161 138 aaKnown RBP16.06■□□□□ 0.16
ERBB2-209ENST00000578709 NTM-AS1Q6ZSK4 140 aa16.06■□□□□ 0.16
ERBB2-209ENST00000578709 ATP5L2Q7Z4Y8 100 aa16.06■□□□□ 0.16
ERBB2-209ENST00000578709 RPL39LQ96EH5 51 aaKnown RBP16.06■□□□□ 0.16
ERBB2-209ENST00000578709 MRAP2Q96G30 205 aa16.06■□□□□ 0.16
ERBB2-209ENST00000578709 CTDSP1Q9GZU7 261 aa16.05■□□□□ 0.16
ERBB2-209ENST00000578709 FAM104BQ5XKR9 115 aa16.04■□□□□ 0.16
ERBB2-209ENST00000578709 NIT1Q86X76 327 aa16.04■□□□□ 0.16
ERBB2-209ENST00000578709 IMMP2LQ96T52 175 aa16.04■□□□□ 0.16
ERBB2-209ENST00000578709 FAT2Q9NYQ8 4349 aa16.03■□□□□ 0.16
ERBB2-209ENST00000578709 TRBV6-5A0A0K0K1A5 114 aa16.03■□□□□ 0.16
ERBB2-209ENST00000578709 GAS8-AS1O95177 125 aa16.03■□□□□ 0.16
ERBB2-209ENST00000578709 IGHV3-30P01768 117 aa16.03■□□□□ 0.16
ERBB2-209ENST00000578709 IGHV3-33P01772 117 aa16.03■□□□□ 0.16
ERBB2-209ENST00000578709 IGHV3-30-3P0DP02 117 aa16.03■□□□□ 0.16
ERBB2-209ENST00000578709 IGHV3-30-5P0DP03 117 aa16.03■□□□□ 0.16
ERBB2-209ENST00000578709 Q8N3U1 123 aa16.03■□□□□ 0.16
ERBB2-209ENST00000578709 IQCJQ1A5X6 159 aa16.02■□□□□ 0.16
ERBB2-209ENST00000578709 CHCHD7Q9BUK0 85 aa16.02■□□□□ 0.16
ERBB2-209ENST00000578709 IBA57-AS1B1ANH7 110 aa16.01■□□□□ 0.15
ERBB2-209ENST00000578709 KCNIP4Q6PIL6 250 aa16.01■□□□□ 0.15
ERBB2-209ENST00000578709 TRBV25-1A0A075B6N4 114 aa16■□□□□ 0.15
ERBB2-209ENST00000578709 PRSS29PA6NIE9 313 aa16■□□□□ 0.15
ERBB2-209ENST00000578709 MRPL51Q4U2R6 128 aaKnown RBP16■□□□□ 0.15
ERBB2-209ENST00000578709 Q6ZRN7 208 aaPredicted RBP16■□□□□ 0.15
ERBB2-209ENST00000578709 IGHV1-24A0A0C4DH33 117 aa15.99■□□□□ 0.15
ERBB2-209ENST00000578709 SDHAF1A6NFY7 115 aa15.99■□□□□ 0.15
ERBB2-209ENST00000578709 RPS10P46783 165 aaKnown RBP15.99■□□□□ 0.15
ERBB2-209ENST00000578709 NFE4Q86UQ8 179 aa15.99■□□□□ 0.15
ERBB2-209ENST00000578709 CLRN3Q8NCR9 226 aa15.99■□□□□ 0.15
ERBB2-209ENST00000578709 BTF3L4Q96K17 158 aa15.99■□□□□ 0.15
ERBB2-209ENST00000578709 TMEM242Q9NWH2 141 aa15.99■□□□□ 0.15
ERBB2-209ENST00000578709 URGCP-MRPS24S4R325 110 aa15.99■□□□□ 0.15
ERBB2-209ENST00000578709 EPPK1P58107 5090 aaKnown RBP15.98■□□□□ 0.15
ERBB2-209ENST00000578709 C7orf77A4D0Y5 90 aa15.98■□□□□ 0.15
ERBB2-209ENST00000578709 PPP1R17O96001 155 aa15.98■□□□□ 0.15
ERBB2-209ENST00000578709 PKIAP61925 76 aa15.98■□□□□ 0.15
ERBB2-209ENST00000578709 COTL1Q14019 142 aa15.98■□□□□ 0.15
ERBB2-209ENST00000578709 LAGE3Q14657 143 aa15.98■□□□□ 0.15
ERBB2-209ENST00000578709 RHEBQ15382 184 aa15.98■□□□□ 0.15
ERBB2-209ENST00000578709 CHCHD5Q9BSY4 110 aa15.98■□□□□ 0.15
ERBB2-209ENST00000578709 ST20Q9HBF5 79 aa15.98■□□□□ 0.15
ERBB2-209ENST00000578709 A0A087WX48 190 aa15.97■□□□□ 0.15
ERBB2-209ENST00000578709 SMKR1H3BMG3 65 aa15.97■□□□□ 0.15
ERBB2-209ENST00000578709 NCR2O95944 276 aa15.97■□□□□ 0.15
ERBB2-209ENST00000578709 NRACQ8N912 160 aa15.97■□□□□ 0.15
ERBB2-209ENST00000578709 TMEM70Q9BUB7 260 aa15.96■□□□□ 0.15
ERBB2-209ENST00000578709 TRAV9-1A0A075B6T8 112 aa15.95■□□□□ 0.14
ERBB2-209ENST00000578709 TMEM262E9PQX1 116 aa15.95■□□□□ 0.14
ERBB2-209ENST00000578709 POLR2KP53803 58 aaKnown RBP15.95■□□□□ 0.14
ERBB2-209ENST00000578709 TMEM243Q9BU79 118 aa15.95■□□□□ 0.14
ERBB2-209ENST00000578709 HECTD4Q9Y4D8 3996 aa15.94■□□□□ 0.14
ERBB2-209ENST00000578709 A0A1B0GVY2 172 aa15.94■□□□□ 0.14
ERBB2-209ENST00000578709 I3L3M4 83 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms