RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 HLA-DQA1P01909 254 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 GAGE12FP0CL80 117 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 GAGE12GP0CL81 117 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 GAGE12IP0CL82 117 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 SMIM17P0DL12 118 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 TMEM136Q6ZRR5 245 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 C14orf178Q8N769 122 aaPredicted RBP5.66□□□□□ -1.5
COPS3-215ENST00000578317 OR4C5Q8NGB2 326 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 SAMD10Q9BYL1 202 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 DPH3P1Q9H4G8 78 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 DYNC2H1Q8NCM8 4307 aaKnown RBP5.66□□□□□ -1.5
COPS3-215ENST00000578317 TGP01266 2768 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 DEFB130BP0DP73 79 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 DEFB130AP0DP74 79 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 RAB4AP20338 218 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 RAB5AP20339 215 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 DAD1P61803 113 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 SLAQ13239 276 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 C12orf74Q32Q52 190 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 TM2D2Q9BX73 214 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 JPT2Q9H910 190 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 EDA2RQ9HAV5 297 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 CELA1Q9UNI1 258 aa5.66□□□□□ -1.5
COPS3-215ENST00000578317 A0A0A0MQY5 61 aa5.65□□□□□ -1.51
COPS3-215ENST00000578317 PPBPP02775 128 aa5.65□□□□□ -1.51
COPS3-215ENST00000578317 RAB4BP61018 213 aa5.65□□□□□ -1.51
COPS3-215ENST00000578317 AMN1Q8IY45 258 aa5.65□□□□□ -1.51
COPS3-215ENST00000578317 C11orf45Q8TAV5 145 aa5.65□□□□□ -1.51
COPS3-215ENST00000578317 RNF185Q96GF1 192 aa5.65□□□□□ -1.51
COPS3-215ENST00000578317 ZNF479Q96JC4 524 aa5.65□□□□□ -1.51
COPS3-215ENST00000578317 U3KQK5 164 aa5.65□□□□□ -1.51
COPS3-215ENST00000578317 MUC4Q99102 2169 aa5.65□□□□□ -1.51
COPS3-215ENST00000578317 TRBV6-4A0A1B0GX49 114 aa5.64□□□□□ -1.51
COPS3-215ENST00000578317 IGHV3-53P01767 116 aa5.64□□□□□ -1.51
COPS3-215ENST00000578317 APCSP02743 223 aa5.64□□□□□ -1.51
COPS3-215ENST00000578317 ATP5G1P05496 136 aa5.64□□□□□ -1.51
COPS3-215ENST00000578317 FHL2Q14192 279 aa5.64□□□□□ -1.51
COPS3-215ENST00000578317 MRAP2Q96G30 205 aa5.64□□□□□ -1.51
COPS3-215ENST00000578317 TRAPPC1Q9Y5R8 145 aa5.64□□□□□ -1.51
COPS3-215ENST00000578317 DNAH7Q8WXX0 4024 aa5.64□□□□□ -1.51
COPS3-215ENST00000578317 M0QY20 66 aa5.63□□□□□ -1.51
COPS3-215ENST00000578317 PPP1R17O96001 155 aa5.63□□□□□ -1.51
COPS3-215ENST00000578317 GATA1P15976 413 aaPredicted RBP5.63□□□□□ -1.51
COPS3-215ENST00000578317 MRPL51Q4U2R6 128 aaKnown RBP5.63□□□□□ -1.51
COPS3-215ENST00000578317 FAM74A4Q5TZK3 123 aa5.63□□□□□ -1.51
COPS3-215ENST00000578317 PRO0255Q9UI72 69 aa5.63□□□□□ -1.51
COPS3-215ENST00000578317 TRBV10-1A0A0K0K1A3 114 aa5.63□□□□□ -1.51
COPS3-215ENST00000578317 H7C1H1 209 aa5.63□□□□□ -1.51
COPS3-215ENST00000578317 PHOX2AO14813 284 aa5.63□□□□□ -1.51
COPS3-215ENST00000578317 RPS10P46783 165 aaKnown RBP5.63□□□□□ -1.51
COPS3-215ENST00000578317 FABP9Q0Z7S8 132 aa5.63□□□□□ -1.51
COPS3-215ENST00000578317 HHLA3Q9XRX5 114 aa5.63□□□□□ -1.51
COPS3-215ENST00000578317 LAMTOR2Q9Y2Q5 125 aa5.63□□□□□ -1.51
COPS3-215ENST00000578317 IGHV3-73A0A0B4J1V6 119 aa5.62□□□□□ -1.51
COPS3-215ENST00000578317 TRGV4A0A0C4DH28 118 aa5.62□□□□□ -1.51
COPS3-215ENST00000578317 H3BNG1 76 aa5.62□□□□□ -1.51
COPS3-215ENST00000578317 TRGC2P03986 189 aa5.62□□□□□ -1.51
COPS3-215ENST00000578317 CKS2P33552 79 aa5.62□□□□□ -1.51
COPS3-215ENST00000578317 SUMO4Q6EEV6 95 aa5.62□□□□□ -1.51
COPS3-215ENST00000578317 Q6ZTC4 211 aa5.62□□□□□ -1.51
COPS3-215ENST00000578317 ORMDL3Q8N138 153 aa5.62□□□□□ -1.51
COPS3-215ENST00000578317 SLC25A29Q8N8R3 303 aa5.62□□□□□ -1.51
COPS3-215ENST00000578317 NIT2Q9NQR4 276 aa5.62□□□□□ -1.51
COPS3-215ENST00000578317 TRBV6-5A0A0K0K1A5 114 aa5.61□□□□□ -1.51
COPS3-215ENST00000578317 CRYBA4P53673 196 aa5.61□□□□□ -1.51
COPS3-215ENST00000578317 NANOS2P60321 138 aaKnown RBP5.61□□□□□ -1.51
COPS3-215ENST00000578317 DNAJC30Q96LL9 226 aa5.61□□□□□ -1.51
COPS3-215ENST00000578317 ALKBH7Q9BT30 221 aaPredicted RBP5.61□□□□□ -1.51
COPS3-215ENST00000578317 PLECQ15149 4684 aaKnown RBP5.6□□□□□ -1.51
COPS3-215ENST00000578317 TRAV10A0A0B4J240 114 aa5.6□□□□□ -1.51
COPS3-215ENST00000578317 D6R8Y8 96 aa5.6□□□□□ -1.51
COPS3-215ENST00000578317 K7EQD1 137 aa5.6□□□□□ -1.51
COPS3-215ENST00000578317 MGPP08493 103 aa5.6□□□□□ -1.51
COPS3-215ENST00000578317 RHOHQ15669 191 aa5.6□□□□□ -1.51
COPS3-215ENST00000578317 ZNF56Q15929 161 aa5.6□□□□□ -1.51
COPS3-215ENST00000578317 NRACQ8N912 160 aa5.6□□□□□ -1.51
COPS3-215ENST00000578317 C20orf78Q9BR46 151 aa5.6□□□□□ -1.51
COPS3-215ENST00000578317 PRADC1Q9BSG0 188 aa5.6□□□□□ -1.51
COPS3-215ENST00000578317 DEFB131BA0A096LNP1 70 aa5.59□□□□□ -1.51
COPS3-215ENST00000578317 TRAV26-2A0A0B4J265 109 aa5.59□□□□□ -1.51
COPS3-215ENST00000578317 F5H768 121 aa5.59□□□□□ -1.51
COPS3-215ENST00000578317 GAS8-AS1O95177 125 aa5.59□□□□□ -1.51
COPS3-215ENST00000578317 RPL32P62910 135 aaKnown RBP5.59□□□□□ -1.51
COPS3-215ENST00000578317 KIAA1644Q3SXP7 199 aa5.59□□□□□ -1.51
COPS3-215ENST00000578317 VSIG2Q96IQ7 327 aa5.59□□□□□ -1.51
COPS3-215ENST00000578317 PRELID3AQ96N28 172 aa5.59□□□□□ -1.51
COPS3-215ENST00000578317 TRBV7-3A0A075B6L6 115 aa5.59□□□□□ -1.52
COPS3-215ENST00000578317 POLR2KP53803 58 aaKnown RBP5.59□□□□□ -1.52
COPS3-215ENST00000578317 RPL36AP83881 106 aaKnown RBP5.59□□□□□ -1.52
COPS3-215ENST00000578317 NEXN-AS1Q8NBZ9 246 aa5.59□□□□□ -1.52
COPS3-215ENST00000578317 RPL36ALQ969Q0 106 aaKnown RBP5.59□□□□□ -1.52
COPS3-215ENST00000578317 Q9UF83 564 aa5.59□□□□□ -1.52
COPS3-215ENST00000578317 TRAV26-1A0A087WT03 109 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 TRBV27A0A0K0K1C4 114 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 SMKR1H3BMG3 65 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 VCYO14598 125 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 NPYP01303 97 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 P0DMU3 169 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 FAM231AP0DMU4 169 aa5.58□□□□□ -1.52
COPS3-215ENST00000578317 FAM231CP0DMU5 169 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms