RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 LZICQ8WZA0 190 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 PRR15LQ9BU68 103 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 TPT1P8Q9HAU6 139 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 MYCBP2O75592 4640 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 SIPA1L3O60292 1781 aaPredicted RBP-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 UNC13BO14795 1591 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 LAMC3Q9Y6N6 1575 aa-0.06□□□□□ -2.42
TOP2A-202ENST00000577541 UNC79Q9P2D8 2635 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 HIVEP3Q5T1R4 2406 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 CSMD3Q7Z407 3707 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 TRAV1-2A0A0B4J238 106 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 NDUFA2O43678 99 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 IL5P05113 134 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 HIST1H1DP16402 221 aaKnown RBP-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 DPH3Q96FX2 82 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 WFDC6Q9BQY6 131 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 VPS25Q9BRG1 176 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 SPANXA1Q9NS26 97 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 SPANXCQ9NY87 97 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 V9GYV3 84 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 PTPRZ1P23471 2315 aaPredicted RBP-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 IGSF10Q6WRI0 2623 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 KMT2AQ03164 3969 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 MYO7AQ13402 2215 aa-0.07□□□□□ -2.42
TOP2A-202ENST00000577541 MBD5Q9P267 1494 aa-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 LAMC1P11047 1609 aa-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 LOC100130705A0A1B0GUX0 176 aa-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 TMEM14DPA8MWL7 114 aa-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 GNG7O60262 68 aa-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 COPZ1P61923 177 aa-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 SSBP3-AS1Q7Z2R9 100 aa-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 PSMG3Q9BT73 122 aaPredicted RBP-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 SAR1AQ9NR31 198 aa-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 LINC00312Q9Y6C7 94 aa-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 IFT172Q9UG01 1749 aa-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 KMT2CQ8NEZ4 4911 aaKnown RBP-0.08□□□□□ -2.42
TOP2A-202ENST00000577541 CACNA1AO00555 2505 aa-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 GRIN2AQ12879 1464 aa-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 DMBT1Q9UGM3 2413 aaPredicted RBP-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 SPAARA0A1B0GVQ0 90 aa-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 RBM3P98179 157 aaKnown RBP-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 INSL4Q14641 139 aa-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 Q5BKY6 102 aa-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 SPTSSAQ969W0 71 aa-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 SEC11CQ9BY50 192 aa-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 RPRMQ9NS64 109 aa-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 ASXL3Q9C0F0 2248 aa-0.09□□□□□ -2.42
TOP2A-202ENST00000577541 FOCADQ5VW36 1801 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 DOCK11Q5JSL3 2073 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 ZNF815PA8K554 130 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 J3QR89 54 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 APODP05090 189 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 HAMPP81172 84 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 COX6A2Q02221 97 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 SMCO1Q147U7 214 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 Q8N8P6 123 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 FAM107BQ9H098 131 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 AGPAT4-IT1Q9H0P7 198 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 WNK2Q9Y3S1 2297 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 LRP2P98164 4655 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 LPAP08519 4548 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 TNXBP22105 4242 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 ZNF292O60281 2723 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 MRC1P22897 1456 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 ZNF236Q9UL36 1845 aa-0.1□□□□□ -2.43
TOP2A-202ENST00000577541 MCRIP1C9JLW8 97 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 HCG22E2RYF7 251 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 APOC4-APOC2K7ER74 178 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 SNCGO76070 127 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 NDUFB6O95139 128 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 CBLN1P23435 193 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 GCHFRP30047 84 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 CCL18P55774 89 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 RPL7L1Q6DKI1 246 aaKnown RBP-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 PPP1R1CQ8WVI7 109 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 TSLPQ969D9 159 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 PDCD10Q9BUL8 212 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 PRDM2Q13029 1718 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 ARAP2Q8WZ64 1704 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 PARP14Q460N5 1801 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 SPEF2Q9C093 1822 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 ZNF518AQ6AHZ1 1483 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 IFT140Q96RY7 1462 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 CACNA1CQ13936 2221 aa-0.11□□□□□ -2.43
TOP2A-202ENST00000577541 DOCK1Q14185 1865 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 DAPK1P53355 1430 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 HSPG2P98160 4391 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 AHCTF1Q8WYP5 2266 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 TRBV10-3A0A0K0K1G6 114 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 SPINK1P00995 79 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 SCIMPQ6UWF3 145 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 KCNRGQ8N5I3 272 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 PFDN5Q99471 154 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 LINC00470Q9BZP3 86 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 TMEM191AQ9H0A3 160 aa-0.12□□□□□ -2.43
TOP2A-202ENST00000577541 TENM4Q6N022 2769 aa-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 QRICH2Q9H0J4 1663 aa-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 FAM92AA1XBS5 289 aa-0.13□□□□□ -2.43
TOP2A-202ENST00000577541 PIPP12273 146 aaPredicted RBP-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms