RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 SCGB1C2P0DMR2 95 aa12.72□□□□□ -0.37
TOM1L1-221ENST00000575882 TEN1Q86WV5 123 aa12.72□□□□□ -0.37
TOM1L1-221ENST00000575882 A4D1N5 150 aa12.72□□□□□ -0.37
TOM1L1-221ENST00000575882 I3L3M4 83 aa12.72□□□□□ -0.37
TOM1L1-221ENST00000575882 ZNF22P17026 224 aaPredicted RBP12.72□□□□□ -0.37
TOM1L1-221ENST00000575882 PPDPFLQ8WWR9 84 aa12.71□□□□□ -0.37
TOM1L1-221ENST00000575882 CARD19Q96LW7 228 aa12.71□□□□□ -0.37
TOM1L1-221ENST00000575882 ZNF580Q9UK33 172 aa12.71□□□□□ -0.37
TOM1L1-221ENST00000575882 RHODO00212 210 aa12.71□□□□□ -0.37
TOM1L1-221ENST00000575882 IGHV4-59P01825 116 aa12.71□□□□□ -0.37
TOM1L1-221ENST00000575882 FHL3Q13643 280 aa12.71□□□□□ -0.37
TOM1L1-221ENST00000575882 TRAV2A0A0B4J234 112 aa12.7□□□□□ -0.38
TOM1L1-221ENST00000575882 A0A0J9YXV3 536 aa12.7□□□□□ -0.38
TOM1L1-221ENST00000575882 A8MWV9 139 aa12.7□□□□□ -0.38
TOM1L1-221ENST00000575882 RAX2Q96IS3 184 aa12.7□□□□□ -0.38
TOM1L1-221ENST00000575882 IGLV4-3A0A075B6K6 122 aa12.7□□□□□ -0.38
TOM1L1-221ENST00000575882 SYNJ2BPP57105 145 aa12.7□□□□□ -0.38
TOM1L1-221ENST00000575882 SBSPONQ8IVN8 264 aa12.7□□□□□ -0.38
TOM1L1-221ENST00000575882 VCX2Q9H322 139 aa12.7□□□□□ -0.38
TOM1L1-221ENST00000575882 EIF4EBP3O60516 100 aaPredicted RBP12.69□□□□□ -0.38
TOM1L1-221ENST00000575882 COL12A1Q99715 3063 aa12.69□□□□□ -0.38
TOM1L1-221ENST00000575882 NCOR2Q9Y618 2525 aa12.69□□□□□ -0.38
TOM1L1-221ENST00000575882 B4DSR2 109 aa12.68□□□□□ -0.38
TOM1L1-221ENST00000575882 CKS1BP61024 79 aa12.68□□□□□ -0.38
TOM1L1-221ENST00000575882 DEFB112Q30KQ8 113 aa12.68□□□□□ -0.38
TOM1L1-221ENST00000575882 MUSTN1Q8IVN3 82 aa12.68□□□□□ -0.38
TOM1L1-221ENST00000575882 TMEM263Q8WUH6 116 aaKnown RBP12.68□□□□□ -0.38
TOM1L1-221ENST00000575882 CHD8Q9HCK8 2581 aa12.68□□□□□ -0.38
TOM1L1-221ENST00000575882 TRGV11A0A075B6L2 103 aa12.67□□□□□ -0.38
TOM1L1-221ENST00000575882 DUX5Q96PT3 197 aa12.67□□□□□ -0.38
TOM1L1-221ENST00000575882 TRAV26-1A0A087WT03 109 aa12.67□□□□□ -0.38
TOM1L1-221ENST00000575882 H7C2G1 150 aa12.67□□□□□ -0.38
TOM1L1-221ENST00000575882 IGHV3-33P01772 117 aa12.67□□□□□ -0.38
TOM1L1-221ENST00000575882 TCTEX1D4Q5JR98 221 aa12.67□□□□□ -0.38
TOM1L1-221ENST00000575882 ANKRD29Q8N6D5 301 aa12.67□□□□□ -0.38
TOM1L1-221ENST00000575882 PRORYQ9H606 182 aa12.67□□□□□ -0.38
TOM1L1-221ENST00000575882 IGHV3-73A0A0B4J1V6 119 aa12.66□□□□□ -0.38
TOM1L1-221ENST00000575882 CRYBA4P53673 196 aa12.66□□□□□ -0.38
TOM1L1-221ENST00000575882 A0A0B4J2C4 111 aa12.66□□□□□ -0.38
TOM1L1-221ENST00000575882 MT-ATP8P03928 68 aa12.66□□□□□ -0.38
TOM1L1-221ENST00000575882 SPINK8P0C7L1 97 aa12.66□□□□□ -0.38
TOM1L1-221ENST00000575882 HTN1P15515 57 aa12.66□□□□□ -0.38
TOM1L1-221ENST00000575882 ERG28Q9UKR5 140 aa12.66□□□□□ -0.38
TOM1L1-221ENST00000575882 ITPR1Q14643 2758 aa12.66□□□□□ -0.38
TOM1L1-221ENST00000575882 SPTBN4Q9H254 2564 aa12.66□□□□□ -0.38
TOM1L1-221ENST00000575882 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.65□□□□□ -0.381e-6■□□□□ 10.1
TOM1L1-221ENST00000575882 TMEM89A2RUT3 159 aa12.65□□□□□ -0.38
TOM1L1-221ENST00000575882 RBMY1A1P0DJD3 496 aaKnown RBP12.65□□□□□ -0.38
TOM1L1-221ENST00000575882 RBMY1CP0DJD4 496 aa12.65□□□□□ -0.38
TOM1L1-221ENST00000575882 CD28P10747 220 aa12.65□□□□□ -0.38
TOM1L1-221ENST00000575882 XGP55808 180 aa12.65□□□□□ -0.38
TOM1L1-221ENST00000575882 RBMY1FQ15415 496 aaKnown RBP12.65□□□□□ -0.38
TOM1L1-221ENST00000575882 Q6ZUT4 128 aa12.65□□□□□ -0.38
TOM1L1-221ENST00000575882 SPXQ9BT56 116 aa12.64□□□□□ -0.39
TOM1L1-221ENST00000575882 A0A0J9YXY3 114 aa12.64□□□□□ -0.39
TOM1L1-221ENST00000575882 M0R2P5 195 aa12.64□□□□□ -0.39
TOM1L1-221ENST00000575882 SLC25A20O43772 301 aa12.64□□□□□ -0.39
TOM1L1-221ENST00000575882 CFAP161Q6P656 301 aa12.64□□□□□ -0.39
TOM1L1-221ENST00000575882 ADARB2-AS1A8MUL3 147 aa12.63□□□□□ -0.39
TOM1L1-221ENST00000575882 C9JAW5 83 aa12.63□□□□□ -0.39
TOM1L1-221ENST00000575882 IGHV3-30-3P0DP02 117 aa12.63□□□□□ -0.39
TOM1L1-221ENST00000575882 PROK1P58294 105 aa12.63□□□□□ -0.39
TOM1L1-221ENST00000575882 HOXD3P31249 432 aaPredicted RBP12.63□□□□□ -0.39
TOM1L1-221ENST00000575882 FAM104AQ969W3 186 aa12.63□□□□□ -0.39
TOM1L1-221ENST00000575882 TIMM21Q9BVV7 248 aa12.63□□□□□ -0.39
TOM1L1-221ENST00000575882 MAP1AP78559 2803 aaPredicted RBP12.63□□□□□ -0.39
TOM1L1-221ENST00000575882 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.62□□□□□ -0.39
TOM1L1-221ENST00000575882 Q1RN00 199 aa12.62□□□□□ -0.39
TOM1L1-221ENST00000575882 CEMP1Q6PRD7 247 aaPredicted RBP12.62□□□□□ -0.39
TOM1L1-221ENST00000575882 RNF152Q8N8N0 203 aa12.62□□□□□ -0.39
TOM1L1-221ENST00000575882 PYGO1Q9Y3Y4 419 aa12.62□□□□□ -0.39
TOM1L1-221ENST00000575882 KNCNA6PVL3 124 aa12.62□□□□□ -0.39
TOM1L1-221ENST00000575882 GATA3P23771 443 aa12.62□□□□□ -0.39
TOM1L1-221ENST00000575882 SPG11Q96JI7 2443 aa12.62□□□□□ -0.39
TOM1L1-221ENST00000575882 RNASE13Q5GAN3 156 aaKnown RBP12.61□□□□□ -0.39
TOM1L1-221ENST00000575882 CSPG4Q6UVK1 2322 aa12.61□□□□□ -0.39
TOM1L1-221ENST00000575882 MRPS36P82909 103 aaKnown RBP12.61□□□□□ -0.39
TOM1L1-221ENST00000575882 EDA2RQ9HAV5 297 aa12.61□□□□□ -0.39
TOM1L1-221ENST00000575882 DOPEY2Q9Y3R5 2298 aa12.61□□□□□ -0.39
TOM1L1-221ENST00000575882 TRAV8-3A0A0A6YYJ7 113 aa12.6□□□□□ -0.39
TOM1L1-221ENST00000575882 ELANEP08246 267 aa12.6□□□□□ -0.39
TOM1L1-221ENST00000575882 TNFRSF18Q9Y5U5 241 aa12.6□□□□□ -0.39
TOM1L1-221ENST00000575882 PRM2P04554 102 aa12.59□□□□□ -0.39
TOM1L1-221ENST00000575882 NRGNQ92686 78 aa12.59□□□□□ -0.39
TOM1L1-221ENST00000575882 LITAFQ99732 161 aa12.59□□□□□ -0.39
TOM1L1-221ENST00000575882 SORL1Q92673 2214 aa12.59□□□□□ -0.39
TOM1L1-221ENST00000575882 CELSR2Q9HCU4 2923 aa12.58□□□□□ -0.4
TOM1L1-221ENST00000575882 M0QXV9 152 aa12.58□□□□□ -0.4
TOM1L1-221ENST00000575882 DEFB131AP59861 70 aa12.58□□□□□ -0.4
TOM1L1-221ENST00000575882 Q9UF83 564 aa12.58□□□□□ -0.4
TOM1L1-221ENST00000575882 GEMIN7Q9H840 131 aaKnown RBP12.58□□□□□ -0.4
TOM1L1-221ENST00000575882 CRYBG3Q68DQ2 2970 aa12.58□□□□□ -0.4
TOM1L1-221ENST00000575882 IGHV1-58A0A0C4DH39 117 aa12.57□□□□□ -0.4
TOM1L1-221ENST00000575882 PRSS2P07478 247 aa12.57□□□□□ -0.4
TOM1L1-221ENST00000575882 ATXN8Q156A1 80 aa12.57□□□□□ -0.4
TOM1L1-221ENST00000575882 LINC01356Q8N9X3 169 aa12.57□□□□□ -0.4
TOM1L1-221ENST00000575882 DUX3Q96PT4 197 aa12.57□□□□□ -0.4
TOM1L1-221ENST00000575882 BEX4Q9NWD9 120 aaPredicted RBP12.57□□□□□ -0.4
TOM1L1-221ENST00000575882 UBE2E2Q96LR5 201 aa12.57□□□□□ -0.4
TOM1L1-221ENST00000575882 NDUFA12Q9UI09 145 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms