RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 PEX7O00628 323 aa6.26□□□□□ -1.41
CALCOCO2-227ENST00000575560 GAS8-AS1O95177 125 aa6.26□□□□□ -1.41
CALCOCO2-227ENST00000575560 TMEM97Q5BJF2 176 aa6.26□□□□□ -1.41
CALCOCO2-227ENST00000575560 HIST1H2BAQ96A08 127 aa6.26□□□□□ -1.41
CALCOCO2-227ENST00000575560 MARVELD1Q9BSK0 173 aa6.26□□□□□ -1.41
CALCOCO2-227ENST00000575560 ACTR3CQ9C0K3 210 aaPredicted RBP6.26□□□□□ -1.41
CALCOCO2-227ENST00000575560 TNFSF18Q9UNG2 199 aa6.26□□□□□ -1.41
CALCOCO2-227ENST00000575560 KIF25-AS1Q9Y6Z4 181 aa6.26□□□□□ -1.41
CALCOCO2-227ENST00000575560 IGLV10-54A0A075B6I4 117 aa6.25□□□□□ -1.41
CALCOCO2-227ENST00000575560 TRAV8-4A0A0B4J246 113 aa6.25□□□□□ -1.41
CALCOCO2-227ENST00000575560 TRBV6-1A0A0K0K1D8 114 aa6.25□□□□□ -1.41
CALCOCO2-227ENST00000575560 P01737 135 aa6.25□□□□□ -1.41
CALCOCO2-227ENST00000575560 REG3AQ06141 175 aa6.25□□□□□ -1.41
CALCOCO2-227ENST00000575560 GAGE6Q13070 117 aa6.25□□□□□ -1.41
CALCOCO2-227ENST00000575560 WDR73Q6P4I2 378 aa6.25□□□□□ -1.41
CALCOCO2-227ENST00000575560 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.25□□□□□ -1.41
CALCOCO2-227ENST00000575560 C7orf33Q8WU49 177 aa6.25□□□□□ -1.41
CALCOCO2-227ENST00000575560 TRBV25-1A0A075B6N4 114 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 FAM74A7A6NL05 159 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 SSNA1O43805 119 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 UBE2G2P60604 165 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 PRR3P79522 188 aaKnown RBP6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 ZNF56Q15929 161 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 ZNF726P1Q15940 193 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 IQCJQ1A5X6 159 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 LINC00299Q6ZSB3 139 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 C20orf203Q8NBC4 194 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 OR10AG1Q8NH19 301 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 FMC1Q96HJ9 113 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 DERL1Q9BUN8 251 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 SSBP4Q9BWG4 385 aaPredicted RBP6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 NKX6-2Q9C056 277 aaPredicted RBP6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 AP5S1Q9NUS5 200 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 LPAP08519 4548 aa6.24□□□□□ -1.41
CALCOCO2-227ENST00000575560 LTAP01374 205 aa6.23□□□□□ -1.41
CALCOCO2-227ENST00000575560 GZMBP10144 247 aa6.23□□□□□ -1.41
CALCOCO2-227ENST00000575560 IFITM3Q01628 133 aa6.23□□□□□ -1.41
CALCOCO2-227ENST00000575560 GTSF1Q8WW33 167 aa6.23□□□□□ -1.41
CALCOCO2-227ENST00000575560 IGLV4-60A0A075B6I1 120 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 IGHV1-24A0A0C4DH33 117 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 A0A1B0GUV1 79 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 SNAI2O43623 268 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 UPK1BO75841 260 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 COX6A2Q02221 97 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 SRSF9Q13242 221 aaKnown RBP eCLIP6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 SPINK6Q6UWN8 80 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 S100ZQ8WXG8 99 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 AQP10Q96PS8 301 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 ZNF471Q9BX82 626 aaPredicted RBP6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 GFRA4Q9GZZ7 299 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 MUC2Q02817 5179 aa6.22□□□□□ -1.41
CALCOCO2-227ENST00000575560 MUC21A0A0G2JKD1 596 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 CTXND1A0A1B0GTU2 59 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 F5H697 171 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 NDUFS6O75380 124 aaKnown RBP6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 CXCL1P09341 107 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 RAB5CP51148 216 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 UBE2G1P62253 170 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 MAJINQ3KP22 176 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 REG3GQ6UW15 175 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 C15orf56Q8N910 161 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 PRSS3P2Q8NHM4 247 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 NDUFA13Q9P0J0 144 aa6.21□□□□□ -1.42
CALCOCO2-227ENST00000575560 MUC21A0A140T8X8 626 aa6.2□□□□□ -1.42
CALCOCO2-227ENST00000575560 M0QY20 66 aa6.2□□□□□ -1.42
CALCOCO2-227ENST00000575560 OR5AL1P0C617 328 aa6.2□□□□□ -1.42
CALCOCO2-227ENST00000575560 RPS10P46783 165 aaKnown RBP6.2□□□□□ -1.42
CALCOCO2-227ENST00000575560 STPG4Q8N801 248 aa6.2□□□□□ -1.42
CALCOCO2-227ENST00000575560 MRPL18Q9H0U6 180 aaKnown RBP6.2□□□□□ -1.42
CALCOCO2-227ENST00000575560 FHITP49789 147 aa6.19□□□□□ -1.42
CALCOCO2-227ENST00000575560 SPANXN1Q5VSR9 72 aa6.19□□□□□ -1.42
CALCOCO2-227ENST00000575560 INO80EQ8NBZ0 244 aaPredicted RBP6.19□□□□□ -1.42
CALCOCO2-227ENST00000575560 LYPD6BQ8NI32 183 aa6.19□□□□□ -1.42
CALCOCO2-227ENST00000575560 TCEAL7Q9BRU2 100 aa6.19□□□□□ -1.42
CALCOCO2-227ENST00000575560 MLST8Q9BVC4 326 aa6.19□□□□□ -1.42
CALCOCO2-227ENST00000575560 IGKV2-24A0A0C4DH68 120 aa6.18□□□□□ -1.42
CALCOCO2-227ENST00000575560 RPL7L1Q6DKI1 246 aaKnown RBP6.18□□□□□ -1.42
CALCOCO2-227ENST00000575560 CFAP161Q6P656 301 aa6.18□□□□□ -1.42
CALCOCO2-227ENST00000575560 TMEM243Q9BU79 118 aa6.18□□□□□ -1.42
CALCOCO2-227ENST00000575560 A0A096LNI7 61 aa6.17□□□□□ -1.42
CALCOCO2-227ENST00000575560 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
CALCOCO2-227ENST00000575560 SMIM17P0DL12 118 aa6.17□□□□□ -1.42
CALCOCO2-227ENST00000575560 SSTP61278 116 aa6.17□□□□□ -1.42
CALCOCO2-227ENST00000575560 S100A9P06702 114 aaKnown RBP6.16□□□□□ -1.42
CALCOCO2-227ENST00000575560 AKR1C3P42330 323 aa6.16□□□□□ -1.42
CALCOCO2-227ENST00000575560 DEFA3P59666 94 aa6.16□□□□□ -1.42
CALCOCO2-227ENST00000575560 HIGD2BQ4VC39 106 aa6.16□□□□□ -1.42
CALCOCO2-227ENST00000575560 Q5BKY6 102 aa6.16□□□□□ -1.42
CALCOCO2-227ENST00000575560 CST9LP1Q5W188 147 aa6.16□□□□□ -1.42
CALCOCO2-227ENST00000575560 SUMO4Q6EEV6 95 aa6.16□□□□□ -1.42
CALCOCO2-227ENST00000575560 PGLYRP4Q96LB8 373 aa6.16□□□□□ -1.42
CALCOCO2-227ENST00000575560 AP1S3Q96PC3 154 aa6.16□□□□□ -1.42
CALCOCO2-227ENST00000575560 LINC00474Q9P2X8 69 aa6.16□□□□□ -1.42
CALCOCO2-227ENST00000575560 GVQW2A0A096LPI5 108 aaPredicted RBP6.15□□□□□ -1.42
CALCOCO2-227ENST00000575560 BORCS7-ASMTA0A0B4J1R7 106 aa6.15□□□□□ -1.42
CALCOCO2-227ENST00000575560 TMEM238LA0A1B0GVL6 79 aa6.15□□□□□ -1.42
CALCOCO2-227ENST00000575560 MAP1LC3B2A6NCE7 125 aa6.15□□□□□ -1.42
CALCOCO2-227ENST00000575560 H7C1H1 209 aa6.15□□□□□ -1.42
CALCOCO2-227ENST00000575560 SULT1A2P50226 295 aa6.15□□□□□ -1.42
CALCOCO2-227ENST00000575560 NKX2-5P52952 324 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms