RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PPP1R1CQ8WVI7 109 aa7.65□□□□□ -1.18
PRPF8-208ENST00000573716 RBM38Q9H0Z9 239 aaKnown RBP7.65□□□□□ -1.18
PRPF8-208ENST00000573716 F5H697 171 aa7.64□□□□□ -1.19
PRPF8-208ENST00000573716 STAG3L2P0CL84 134 aa7.64□□□□□ -1.19
PRPF8-208ENST00000573716 STAG3L3P0CL85 134 aa7.64□□□□□ -1.19
PRPF8-208ENST00000573716 RAB4BP61018 213 aa7.64□□□□□ -1.19
PRPF8-208ENST00000573716 COX6A2Q02221 97 aa7.64□□□□□ -1.19
PRPF8-208ENST00000573716 REG3AQ06141 175 aa7.64□□□□□ -1.19
PRPF8-208ENST00000573716 Q86TA4 180 aa7.64□□□□□ -1.19
PRPF8-208ENST00000573716 RAB24Q969Q5 203 aa7.64□□□□□ -1.19
PRPF8-208ENST00000573716 DERL1Q9BUN8 251 aa7.64□□□□□ -1.19
PRPF8-208ENST00000573716 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
PRPF8-208ENST00000573716 DNLZQ5SXM8 178 aa7.63□□□□□ -1.19
PRPF8-208ENST00000573716 FAM162BQ5T6X4 162 aa7.63□□□□□ -1.19
PRPF8-208ENST00000573716 NTM-AS1Q6ZSK4 140 aa7.63□□□□□ -1.19
PRPF8-208ENST00000573716 STPG4Q8N801 248 aa7.63□□□□□ -1.19
PRPF8-208ENST00000573716 TMEM167BQ9NRX6 74 aa7.63□□□□□ -1.19
PRPF8-208ENST00000573716 TRBV25-1A0A075B6N4 114 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 MUC21A0A0G2JKD1 596 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 MPC2O95563 127 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 CXorf1O96002 111 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 PET100P0DJ07 73 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 CRIP1P50238 77 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 DEFA3P59666 94 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 UBE2G2P60604 165 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 TMEM97Q5BJF2 176 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 MZT2BQ6NZ67 158 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 SPINK6Q6UWN8 80 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 SUN5Q8TC36 379 aa7.62□□□□□ -1.19
PRPF8-208ENST00000573716 PEX7O00628 323 aa7.61□□□□□ -1.19
PRPF8-208ENST00000573716 H2BFSP57053 126 aa7.61□□□□□ -1.19
PRPF8-208ENST00000573716 SSTP61278 116 aa7.61□□□□□ -1.19
PRPF8-208ENST00000573716 PRSS3P2Q8NHM4 247 aa7.61□□□□□ -1.19
PRPF8-208ENST00000573716 TRAV8-4A0A0B4J246 113 aa7.6□□□□□ -1.19
PRPF8-208ENST00000573716 TRBV6-1A0A0K0K1D8 114 aa7.6□□□□□ -1.19
PRPF8-208ENST00000573716 MUC21A0A140T8X8 626 aa7.6□□□□□ -1.19
PRPF8-208ENST00000573716 P01737 135 aa7.6□□□□□ -1.19
PRPF8-208ENST00000573716 RGS21Q2M5E4 152 aa7.6□□□□□ -1.19
PRPF8-208ENST00000573716 HIGD2BQ4VC39 106 aa7.6□□□□□ -1.19
PRPF8-208ENST00000573716 PRR27Q6MZM9 219 aa7.6□□□□□ -1.19
PRPF8-208ENST00000573716 IGHV1-24A0A0C4DH33 117 aa7.59□□□□□ -1.19
PRPF8-208ENST00000573716 NDUFS6O75380 124 aaKnown RBP7.59□□□□□ -1.19
PRPF8-208ENST00000573716 RPS10P46783 165 aaKnown RBP7.59□□□□□ -1.19
PRPF8-208ENST00000573716 OR10AG1Q8NH19 301 aa7.59□□□□□ -1.19
PRPF8-208ENST00000573716 ENKURQ8TC29 256 aa7.59□□□□□ -1.19
PRPF8-208ENST00000573716 ZNF471Q9BX82 626 aaPredicted RBP7.59□□□□□ -1.19
PRPF8-208ENST00000573716 ACTR3CQ9C0K3 210 aaPredicted RBP7.59□□□□□ -1.19
PRPF8-208ENST00000573716 A0A1W2PRE2 83 aa7.58□□□□□ -1.2
PRPF8-208ENST00000573716 SSNA1O43805 119 aa7.58□□□□□ -1.2
PRPF8-208ENST00000573716 SULT1A2P50226 295 aa7.58□□□□□ -1.2
PRPF8-208ENST00000573716 UBE2G1P62253 170 aa7.58□□□□□ -1.2
PRPF8-208ENST00000573716 C20orf203Q8NBC4 194 aa7.58□□□□□ -1.2
PRPF8-208ENST00000573716 GFRA4Q9GZZ7 299 aa7.58□□□□□ -1.2
PRPF8-208ENST00000573716 VAX2Q9UIW0 290 aa7.58□□□□□ -1.2
PRPF8-208ENST00000573716 IGLV4-60A0A075B6I1 120 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 IGKV3OR2-268A0A0C4DH90 116 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 GAGE12HA6NDE8 117 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 H7C1H1 209 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 MBP02144 154 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 GZMBP10144 247 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 IQCJQ1A5X6 159 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 SPANXN1Q5VSR9 72 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 CFAP161Q6P656 301 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 C15orf56Q8N910 161 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 CCDC32Q9BV29 185 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 ZFP30Q9Y2G7 519 aa7.57□□□□□ -1.2
PRPF8-208ENST00000573716 LPAP08519 4548 aa7.56□□□□□ -1.2
PRPF8-208ENST00000573716 A0A096LNI7 61 aa7.56□□□□□ -1.2
PRPF8-208ENST00000573716 SMIM17P0DL12 118 aa7.56□□□□□ -1.2
PRPF8-208ENST00000573716 ATP6V0CP27449 155 aa7.56□□□□□ -1.2
PRPF8-208ENST00000573716 ZNF674Q2M3X9 581 aa7.56□□□□□ -1.2
PRPF8-208ENST00000573716 TMEM243Q9BU79 118 aa7.56□□□□□ -1.2
PRPF8-208ENST00000573716 MGPP08493 103 aa7.55□□□□□ -1.2
PRPF8-208ENST00000573716 CTAG1AP78358 180 aa7.55□□□□□ -1.2
PRPF8-208ENST00000573716 SRSF9Q13242 221 aaKnown RBP eCLIP7.55□□□□□ -1.2
PRPF8-208ENST00000573716 Q6ZRP5 223 aa7.55□□□□□ -1.2
PRPF8-208ENST00000573716 HIST1H2BAQ96A08 127 aa7.55□□□□□ -1.2
PRPF8-208ENST00000573716 FMC1Q96HJ9 113 aa7.55□□□□□ -1.2
PRPF8-208ENST00000573716 AQP10Q96PS8 301 aa7.55□□□□□ -1.2
PRPF8-208ENST00000573716 PSMG3Q9BT73 122 aaPredicted RBP7.55□□□□□ -1.2
PRPF8-208ENST00000573716 FAM231BA6NCW3 169 aa7.54□□□□□ -1.2
PRPF8-208ENST00000573716 FAM74A7A6NL05 159 aa7.54□□□□□ -1.2
PRPF8-208ENST00000573716 INMT-MINDY4F8WBC2 141 aa7.54□□□□□ -1.2
PRPF8-208ENST00000573716 UBE2L6O14933 153 aa7.54□□□□□ -1.2
PRPF8-208ENST00000573716 hCG_2014768A0A024R1R8 64 aa7.53□□□□□ -1.2
PRPF8-208ENST00000573716 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
PRPF8-208ENST00000573716 SERF2P84101 59 aa7.53□□□□□ -1.2
PRPF8-208ENST00000573716 COX8CQ7Z4L0 72 aa7.53□□□□□ -1.2
PRPF8-208ENST00000573716 S100ZQ8WXG8 99 aa7.53□□□□□ -1.2
PRPF8-208ENST00000573716 TNFSF18Q9UNG2 199 aa7.53□□□□□ -1.2
PRPF8-208ENST00000573716 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
PRPF8-208ENST00000573716 A0A1B0GUV1 79 aa7.52□□□□□ -1.21
PRPF8-208ENST00000573716 NKX2-5P52952 324 aaPredicted RBP7.52□□□□□ -1.21
PRPF8-208ENST00000573716 SLC51BQ86UW2 128 aa7.52□□□□□ -1.21
PRPF8-208ENST00000573716 INO80EQ8NBZ0 244 aaPredicted RBP7.52□□□□□ -1.21
PRPF8-208ENST00000573716 AP1S3Q96PC3 154 aa7.52□□□□□ -1.21
PRPF8-208ENST00000573716 NKX6-2Q9C056 277 aaPredicted RBP7.52□□□□□ -1.21
PRPF8-208ENST00000573716 LINC00474Q9P2X8 69 aa7.52□□□□□ -1.21
PRPF8-208ENST00000573716 TRAV26-2A0A0B4J265 109 aa7.51□□□□□ -1.21
PRPF8-208ENST00000573716 CTXND1A0A1B0GTU2 59 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms