RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	TRO	Q12816	1431 aa	Predicted RBP	0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	NSD3	Q9BZ95	1437 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	KDM5A	P29375	1690 aa	Known RBP	0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	ARFGEF3	Q5TH69	2177 aa		0.72	□□□□□ -2.29
UBR1-209	ENST00000569243	PLXNA2	O75051	1894 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	MYO18A	Q92614	2054 aa	Known RBP	0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	KIAA1549L	Q6ZVL6	1849 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	TRBV6-5	A0A0K0K1A5	114 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	TRBV10-3	A0A0K0K1G6	114 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	LOC101927531	A0A1B0GV80	90 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	TRBV6-4	A0A1B0GX49	114 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	NUPR2	A6NF83	97 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	CRYM-AS1	A6NIL9	109 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243		K7EP34	96 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	SSSCA1	O60232	199 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	IGLV3-1	P01715	115 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	TRAPPC2	P0DI81	140 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	TRAPPC2B	P0DI82	140 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	ATP5E	P56381	51 aa	Predicted RBP	0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	SEC11A	P67812	179 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	PEA15	Q15121	130 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	TDRG1	Q3Y452	100 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	ALKAL2	Q6UX46	152 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243		Q6ZRN7	208 aa	Predicted RBP	0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	OR10AG1	Q8NH19	301 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	MANBAL	Q9NQG1	85 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	BET1L	Q9NYM9	111 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	KLK9	Q9UKQ9	250 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	ALPK2	Q86TB3	2170 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	FYCO1	Q9BQS8	1478 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	ZFHX3	Q15911	3703 aa		0.71	□□□□□ -2.3
UBR1-209	ENST00000569243	SPAG17	Q6Q759	2223 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	DISP1	Q96F81	1524 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	KDM5D	Q9BY66	1539 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	MON2	Q7Z3U7	1717 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	ABCA3	Q99758	1704 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	PTPRF	P10586	1907 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	TET1	Q8NFU7	2136 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	DOCK1	Q14185	1865 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	CTTNBP2	Q8WZ74	1663 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	IFT140	Q96RY7	1462 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	TRAV2	A0A0B4J234	112 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243		A0A0G2JND7	137 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	TRBV10-1	A0A0K0K1A3	114 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	JMJD7-PLA2G4B	H0Y9G9	81 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	CYB5A	P00167	134 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	IGHV3-33	P01772	117 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	APOC3	P02656	99 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	ASIP	P42127	132 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	UBE2D1	P51668	147 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	RPL37A	P61513	92 aa	Known RBP	0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	C10orf128	Q5T292	105 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	ZNF720	Q7Z2F6	126 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	COA5	Q86WW8	74 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	LCN9	Q8WX39	176 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	DMAC1	Q96GE9	116 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	DAPK1	P53355	1430 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	LAMC3	Q9Y6N6	1575 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	SPTB	P11277	2137 aa		0.7	□□□□□ -2.3
UBR1-209	ENST00000569243	TOPAZ1	Q8N9V7	1692 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	INTS1	Q8N201	2190 aa	Known RBP	0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	PCDH15	Q96QU1	1955 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	SHROOM2	Q13796	1616 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	IGKV2-29	A2NJV5	120 aa	Predicted RBP	0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	CLPSL1	A2RUU4	121 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	CHKB-CPT1B	H3BT56	60 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	SIX6	O95475	246 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	SFT2D2	O95562	160 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	CYP2G1P	Q6ZSU1	146 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	ZGRF1	Q86YA3	2104 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	C20orf197	Q8N268	126 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	MYOZ3	Q8TDC0	251 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	ZNF625	Q96I27	306 aa	Predicted RBP	0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	AMELY	Q99218	206 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	BPESC1	Q9GZL8	116 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	C22orf24	Q9Y442	160 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	COL4A1	P02462	1669 aa		0.69	□□□□□ -2.3
UBR1-209	ENST00000569243	PARP14	Q460N5	1801 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	GAPVD1	Q14C86	1478 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	MYH8	P13535	1937 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	MDC1	Q14676	2089 aa	Known RBP	0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	TRBV7-3	A0A075B6L6	115 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	TRBV7-1	A0A0A6YYK4	115 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	TRAV22	A0A0B4J277	110 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	PIGBOS1	A0A0B4J2F0	54 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	IGKV3D-7	A0A0C4DH55	119 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	IGKV3OR2-268	A0A0C4DH90	116 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243		A0A0J9YY99	117 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	TRBV7-7	A0A0K0K1E9	115 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	NBDY	A0A0U1RRE5	68 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	NAP1L6	A6NFF2	107 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	ATOX1	O00244	68 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	ANG	P03950	147 aa	Known RBP	0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	PDE6G	P18545	87 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	CCL8	P80075	99 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	MPV17L	Q2QL34	196 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243		Q5VV11	94 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	LINC00299	Q6ZSB3	139 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243	FAM223A	Q8IWN6	122 aa		0.68	□□□□□ -2.3
UBR1-209	ENST00000569243		Q8N6K4	173 aa		0.68	□□□□□ -2.3

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms