RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 MSRB1Q9NZV6 116 aa8.85□□□□□ -0.99
CLK3-224ENST00000568605 URGCP-MRPS24S4R325 110 aa8.85□□□□□ -0.99
CLK3-224ENST00000568605 DNAH17Q9UFH2 4485 aa8.84□□□□□ -0.99
CLK3-224ENST00000568605 SRSF3P84103 164 aaKnown RBP8.84□□□□□ -0.99
CLK3-224ENST00000568605 TMEM97Q5BJF2 176 aa8.84□□□□□ -0.99
CLK3-224ENST00000568605 KCNIP4Q6PIL6 250 aa8.84□□□□□ -0.99
CLK3-224ENST00000568605 DNAJC30Q96LL9 226 aa8.84□□□□□ -0.99
CLK3-224ENST00000568605 FAT2Q9NYQ8 4349 aa8.84□□□□□ -1
CLK3-224ENST00000568605 HIGD1CA8MV81 97 aa8.83□□□□□ -1
CLK3-224ENST00000568605 C9JQL5 133 aa8.83□□□□□ -1
CLK3-224ENST00000568605 SUMO4Q6EEV6 95 aa8.83□□□□□ -1
CLK3-224ENST00000568605 DAZ4Q86SG3 579 aaKnown RBP8.83□□□□□ -1
CLK3-224ENST00000568605 PGLYRP4Q96LB8 373 aa8.83□□□□□ -1
CLK3-224ENST00000568605 DAZ3Q9NR90 486 aaKnown RBP8.83□□□□□ -1
CLK3-224ENST00000568605 Q9UF83 564 aa8.83□□□□□ -1
CLK3-224ENST00000568605 TNFRSF18Q9Y5U5 241 aa8.83□□□□□ -1
CLK3-224ENST00000568605 A0A1B0GUT8 65 aa8.82□□□□□ -1
CLK3-224ENST00000568605 FOXA3P55318 350 aaPredicted RBP8.82□□□□□ -1
CLK3-224ENST00000568605 PKIAP61925 76 aa8.82□□□□□ -1
CLK3-224ENST00000568605 LAGE3Q14657 143 aa8.82□□□□□ -1
CLK3-224ENST00000568605 RASL11AQ6T310 242 aa8.82□□□□□ -1
CLK3-224ENST00000568605 V9GYV3 84 aa8.82□□□□□ -1
CLK3-224ENST00000568605 M0QY20 66 aa8.81□□□□□ -1
CLK3-224ENST00000568605 IGHV3-30P01768 117 aa8.81□□□□□ -1
CLK3-224ENST00000568605 IGHV3-33P01772 117 aa8.81□□□□□ -1
CLK3-224ENST00000568605 IGHV3-30-3P0DP02 117 aa8.81□□□□□ -1
CLK3-224ENST00000568605 IGHV3-30-5P0DP03 117 aa8.81□□□□□ -1
CLK3-224ENST00000568605 PNRC1Q12796 327 aaPredicted RBP8.81□□□□□ -1
CLK3-224ENST00000568605 FRZBQ92765 325 aa8.81□□□□□ -1
CLK3-224ENST00000568605 CHCHD7Q9BUK0 85 aa8.81□□□□□ -1
CLK3-224ENST00000568605 NAT8BQ9UHF3 227 aa8.81□□□□□ -1
CLK3-224ENST00000568605 A0A087WX48 190 aa8.8□□□□□ -1
CLK3-224ENST00000568605 TRBV6-8A0A0A6YYG3 113 aa8.8□□□□□ -1
CLK3-224ENST00000568605 A0A1B0GVY2 172 aa8.8□□□□□ -1
CLK3-224ENST00000568605 EREGO14944 169 aa8.8□□□□□ -1
CLK3-224ENST00000568605 TNP2Q05952 138 aa8.8□□□□□ -1
CLK3-224ENST00000568605 RIGQ13278 110 aa8.8□□□□□ -1
CLK3-224ENST00000568605 NIT2Q9NQR4 276 aa8.8□□□□□ -1
CLK3-224ENST00000568605 HECTD4Q9Y4D8 3996 aa8.8□□□□□ -1
CLK3-224ENST00000568605 TRBV25-1A0A075B6N4 114 aa8.79□□□□□ -1
CLK3-224ENST00000568605 IBA57-AS1B1ANH7 110 aa8.79□□□□□ -1
CLK3-224ENST00000568605 ELOBQ15370 118 aa8.79□□□□□ -1
CLK3-224ENST00000568605 PPP1R2P9O14990 202 aa8.78□□□□□ -1
CLK3-224ENST00000568605 PSCAO43653 123 aa8.78□□□□□ -1
CLK3-224ENST00000568605 UQCC3Q6UW78 93 aa8.78□□□□□ -1
CLK3-224ENST00000568605 Q6ZRN7 208 aaPredicted RBP8.78□□□□□ -1
CLK3-224ENST00000568605 NIT1Q86X76 327 aa8.78□□□□□ -1
CLK3-224ENST00000568605 NUP35Q8NFH5 326 aa8.78□□□□□ -1
CLK3-224ENST00000568605 TMEM191AQ9H0A3 160 aa8.78□□□□□ -1
CLK3-224ENST00000568605 PKD1P98161 4303 aa8.77□□□□□ -1.01
CLK3-224ENST00000568605 TRAV8-3A0A0A6YYJ7 113 aa8.77□□□□□ -1.01
CLK3-224ENST00000568605 A0A1B0GW15 77 aa8.77□□□□□ -1.01
CLK3-224ENST00000568605 S100A8P05109 93 aa8.77□□□□□ -1.01
CLK3-224ENST00000568605 CHCHD5Q9BSY4 110 aa8.77□□□□□ -1.01
CLK3-224ENST00000568605 Q9HAA7 133 aa8.77□□□□□ -1.01
CLK3-224ENST00000568605 IGHV1-24A0A0C4DH33 117 aa8.76□□□□□ -1.01
CLK3-224ENST00000568605 SMIM27A0A1W2PRY6 76 aa8.76□□□□□ -1.01
CLK3-224ENST00000568605 TMEM262E9PQX1 116 aa8.76□□□□□ -1.01
CLK3-224ENST00000568605 IFITM2Q01629 132 aa8.76□□□□□ -1.01
CLK3-224ENST00000568605 RMI2Q96E14 147 aa8.76□□□□□ -1.01
CLK3-224ENST00000568605 TM2D2Q9BX73 214 aa8.76□□□□□ -1.01
CLK3-224ENST00000568605 TRAV26-2A0A0B4J265 109 aa8.75□□□□□ -1.01
CLK3-224ENST00000568605 CRPP02741 224 aa8.75□□□□□ -1.01
CLK3-224ENST00000568605 COTL1Q14019 142 aa8.75□□□□□ -1.01
CLK3-224ENST00000568605 IQCJQ1A5X6 159 aa8.75□□□□□ -1.01
CLK3-224ENST00000568605 GATD1Q8NB37 220 aa8.75□□□□□ -1.01
CLK3-224ENST00000568605 MRAP2Q96G30 205 aa8.75□□□□□ -1.01
CLK3-224ENST00000568605 COX11Q9Y6N1 276 aa8.75□□□□□ -1.01
CLK3-224ENST00000568605 BIRC6Q9NR09 4857 aa8.75□□□□□ -1.01
CLK3-224ENST00000568605 MT-ND4LP03901 98 aa8.74□□□□□ -1.01
CLK3-224ENST00000568605 ANAPC16Q96DE5 110 aa8.74□□□□□ -1.01
CLK3-224ENST00000568605 UBE2L6O14933 153 aa8.73□□□□□ -1.01
CLK3-224ENST00000568605 NCR2O95944 276 aa8.73□□□□□ -1.01
CLK3-224ENST00000568605 PPP1R17O96001 155 aa8.73□□□□□ -1.01
CLK3-224ENST00000568605 AMTP48728 403 aa8.73□□□□□ -1.01
CLK3-224ENST00000568605 Q0VG73 95 aa8.73□□□□□ -1.01
CLK3-224ENST00000568605 Q8N3U1 123 aa8.73□□□□□ -1.01
CLK3-224ENST00000568605 TMEM243Q9BU79 118 aa8.73□□□□□ -1.01
CLK3-224ENST00000568605 KLK12Q9UKR0 248 aa8.73□□□□□ -1.01
CLK3-224ENST00000568605 SDHAF1A6NFY7 115 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 F8W036 122 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 HBBP68871 147 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 MPV17L2Q567V2 206 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 NTM-AS1Q6ZSK4 140 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 ATP5L2Q7Z4Y8 100 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 SPATA12Q7Z6I5 190 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 COMMD7Q86VX2 200 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 AMN1Q8IY45 258 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 RPL39LQ96EH5 51 aaKnown RBP8.72□□□□□ -1.01
CLK3-224ENST00000568605 ST20Q9HBF5 79 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 PKHD1P08F94 4074 aa8.72□□□□□ -1.01
CLK3-224ENST00000568605 A0A087WTM6 91 aa8.71□□□□□ -1.02
CLK3-224ENST00000568605 TRBV6-5A0A0K0K1A5 114 aa8.71□□□□□ -1.02
CLK3-224ENST00000568605 C16orf90A8MZG2 172 aa8.71□□□□□ -1.02
CLK3-224ENST00000568605 APCSP02743 223 aa8.71□□□□□ -1.02
CLK3-224ENST00000568605 ANGP03950 147 aaKnown RBP8.71□□□□□ -1.02
CLK3-224ENST00000568605 RAB4AP20338 218 aa8.71□□□□□ -1.02
CLK3-224ENST00000568605 CAMPP49913 170 aa8.71□□□□□ -1.02
CLK3-224ENST00000568605 GAGE6Q13070 117 aa8.71□□□□□ -1.02
CLK3-224ENST00000568605 MRPL54Q6P161 138 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms