RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PHLDA3Q9Y5J5 127 aa12.43□□□□□ -0.42
LINC01238-205ENST00000567549 TRAV34A0A0B4J273 112 aa12.42□□□□□ -0.42
LINC01238-205ENST00000567549 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
LINC01238-205ENST00000567549 TRBV6-1A0A0K0K1D8 114 aa12.42□□□□□ -0.42
LINC01238-205ENST00000567549 CENPWQ5EE01 88 aa12.42□□□□□ -0.42
LINC01238-205ENST00000567549 H3BVH4 76 aa12.41□□□□□ -0.42
LINC01238-205ENST00000567549 BAGE2Q86Y30 109 aa12.41□□□□□ -0.42
LINC01238-205ENST00000567549 LINC00479Q96M42 142 aa12.41□□□□□ -0.42
LINC01238-205ENST00000567549 CHCHD7Q9BUK0 85 aa12.41□□□□□ -0.42
LINC01238-205ENST00000567549 BIN3Q9NQY0 253 aa12.41□□□□□ -0.42
LINC01238-205ENST00000567549 TRBV20OR9-2A0A075B6H5 130 aa12.4□□□□□ -0.42
LINC01238-205ENST00000567549 SMR3BP02814 79 aaPredicted RBP12.4□□□□□ -0.42
LINC01238-205ENST00000567549 PLA2G1BP04054 148 aaKnown RBP12.4□□□□□ -0.42
LINC01238-205ENST00000567549 ARMS2P0C7Q2 107 aa12.4□□□□□ -0.42
LINC01238-205ENST00000567549 LINC00694P0DN24 101 aa12.4□□□□□ -0.42
LINC01238-205ENST00000567549 COX8CQ7Z4L0 72 aa12.4□□□□□ -0.42
LINC01238-205ENST00000567549 ZFP82Q8N141 532 aa12.4□□□□□ -0.42
LINC01238-205ENST00000567549 ISOC2Q96AB3 205 aa12.4□□□□□ -0.42
LINC01238-205ENST00000567549 A0A087WX48 190 aa12.39□□□□□ -0.43
LINC01238-205ENST00000567549 TRBV10-1A0A0K0K1A3 114 aa12.39□□□□□ -0.43
LINC01238-205ENST00000567549 RPL36AP83881 106 aaKnown RBP12.39□□□□□ -0.43
LINC01238-205ENST00000567549 FAM74A4Q5TZK3 123 aa12.39□□□□□ -0.43
LINC01238-205ENST00000567549 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
LINC01238-205ENST00000567549 RPL36ALQ969Q0 106 aaKnown RBP12.39□□□□□ -0.43
LINC01238-205ENST00000567549 DMBT1Q9UGM3 2413 aaPredicted RBP12.39□□□□□ -0.43
LINC01238-205ENST00000567549 CBLN2Q8IUK8 224 aa12.38□□□□□ -0.43
LINC01238-205ENST00000567549 Q8N976 141 aa12.38□□□□□ -0.43
LINC01238-205ENST00000567549 SFRP2Q96HF1 295 aa12.38□□□□□ -0.43
LINC01238-205ENST00000567549 SH2D1AO60880 128 aa12.37□□□□□ -0.43
LINC01238-205ENST00000567549 PKIAP61925 76 aa12.37□□□□□ -0.43
LINC01238-205ENST00000567549 LINC01559Q495D7 138 aa12.37□□□□□ -0.43
LINC01238-205ENST00000567549 UFSP1Q6NVU6 142 aa12.37□□□□□ -0.43
LINC01238-205ENST00000567549 OR10G8Q8NGN5 311 aa12.37□□□□□ -0.43
LINC01238-205ENST00000567549 ZC2HC1AQ96GY0 325 aa12.37□□□□□ -0.43
LINC01238-205ENST00000567549 LTAP01374 205 aa12.36□□□□□ -0.43
LINC01238-205ENST00000567549 IGLV2-8P01709 118 aa12.36□□□□□ -0.43
LINC01238-205ENST00000567549 Q0VG73 95 aa12.36□□□□□ -0.43
LINC01238-205ENST00000567549 DAZ4Q86SG3 579 aaKnown RBP12.36□□□□□ -0.43
LINC01238-205ENST00000567549 IMMP2LQ96T52 175 aa12.36□□□□□ -0.43
LINC01238-205ENST00000567549 DAZ3Q9NR90 486 aaKnown RBP12.36□□□□□ -0.43
LINC01238-205ENST00000567549 OSTCQ9NRP0 149 aa12.36□□□□□ -0.43
LINC01238-205ENST00000567549 K7EN84 100 aa12.35□□□□□ -0.43
LINC01238-205ENST00000567549 M0R381 172 aa12.35□□□□□ -0.43
LINC01238-205ENST00000567549 S100PP25815 95 aa12.35□□□□□ -0.43
LINC01238-205ENST00000567549 C14orf177Q52M58 125 aa12.35□□□□□ -0.43
LINC01238-205ENST00000567549 C14orf178Q8N769 122 aaPredicted RBP12.35□□□□□ -0.43
LINC01238-205ENST00000567549 MLST8Q9BVC4 326 aa12.35□□□□□ -0.43
LINC01238-205ENST00000567549 GRIFINA4D1Z8 144 aa12.34□□□□□ -0.43
LINC01238-205ENST00000567549 NIT1Q86X76 327 aa12.34□□□□□ -0.43
LINC01238-205ENST00000567549 BTF3L4Q96K17 158 aa12.34□□□□□ -0.43
LINC01238-205ENST00000567549 SAMD10Q9BYL1 202 aa12.34□□□□□ -0.43
LINC01238-205ENST00000567549 JPT2Q9H910 190 aa12.34□□□□□ -0.43
LINC01238-205ENST00000567549 TRBV7-3A0A075B6L6 115 aa12.33□□□□□ -0.44
LINC01238-205ENST00000567549 IGKV2D-24A0A075B6R9 120 aa12.33□□□□□ -0.44
LINC01238-205ENST00000567549 COLCA2A8K830 154 aa12.33□□□□□ -0.44
LINC01238-205ENST00000567549 FAM231DQ6ZW35 169 aa12.33□□□□□ -0.44
LINC01238-205ENST00000567549 A0A087WWL8 130 aa12.32□□□□□ -0.44
LINC01238-205ENST00000567549 CXCL1P09341 107 aa12.32□□□□□ -0.44
LINC01238-205ENST00000567549 TMEM97Q5BJF2 176 aa12.32□□□□□ -0.44
LINC01238-205ENST00000567549 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.31□□□□□ -0.44
LINC01238-205ENST00000567549 CRPP02741 224 aa12.31□□□□□ -0.44
LINC01238-205ENST00000567549 CRIP1P50238 77 aa12.31□□□□□ -0.44
LINC01238-205ENST00000567549 RAB4BP61018 213 aa12.31□□□□□ -0.44
LINC01238-205ENST00000567549 Q6ZSA8 131 aa12.31□□□□□ -0.44
LINC01238-205ENST00000567549 DAZAP1Q96EP5 407 aaKnown RBP12.31□□□□□ -0.44
LINC01238-205ENST00000567549 YPEL4Q96NS1 127 aa12.31□□□□□ -0.44
LINC01238-205ENST00000567549 KLK12Q9UKR0 248 aa12.31□□□□□ -0.44
LINC01238-205ENST00000567549 TMSB15BA0A087X1C1 80 aa12.3□□□□□ -0.44
LINC01238-205ENST00000567549 J3QL48 77 aa12.3□□□□□ -0.44
LINC01238-205ENST00000567549 HAMPP81172 84 aa12.3□□□□□ -0.44
LINC01238-205ENST00000567549 BAALCQ8WXS3 180 aa12.3□□□□□ -0.44
LINC01238-205ENST00000567549 UBE2WQ96B02 151 aa12.3□□□□□ -0.44
LINC01238-205ENST00000567549 C1orf43Q9BWL3 253 aa12.3□□□□□ -0.44
LINC01238-205ENST00000567549 TRBV24-1A0A075B6N3 115 aa12.29□□□□□ -0.44
LINC01238-205ENST00000567549 TRAV9-1A0A075B6T8 112 aa12.29□□□□□ -0.44
LINC01238-205ENST00000567549 LECT2O14960 151 aa12.29□□□□□ -0.44
LINC01238-205ENST00000567549 GATCO43716 136 aaKnown RBP12.29□□□□□ -0.44
LINC01238-205ENST00000567549 UBE2D3P61077 147 aa12.29□□□□□ -0.44
LINC01238-205ENST00000567549 UBE2D2P62837 147 aa12.29□□□□□ -0.44
LINC01238-205ENST00000567549 ZNF56Q15929 161 aa12.29□□□□□ -0.44
LINC01238-205ENST00000567549 Q8N3U1 123 aa12.29□□□□□ -0.44
LINC01238-205ENST00000567549 TMEM262E9PQX1 116 aa12.28□□□□□ -0.44
LINC01238-205ENST00000567549 SMIM17P0DL12 118 aa12.28□□□□□ -0.44
LINC01238-205ENST00000567549 RPL19P84098 196 aaKnown RBP12.28□□□□□ -0.44
LINC01238-205ENST00000567549 NUDT10Q8NFP7 164 aa12.28□□□□□ -0.44
LINC01238-205ENST00000567549 DEFB104AQ8WTQ1 72 aa12.28□□□□□ -0.44
LINC01238-205ENST00000567549 NUDT11Q96G61 164 aa12.28□□□□□ -0.44
LINC01238-205ENST00000567549 RNASE7Q9H1E1 156 aaKnown RBP12.28□□□□□ -0.44
LINC01238-205ENST00000567549 V9GYV3 84 aa12.28□□□□□ -0.44
LINC01238-205ENST00000567549 RAB5AP20339 215 aa12.27□□□□□ -0.45
LINC01238-205ENST00000567549 SPANXN1Q5VSR9 72 aa12.27□□□□□ -0.45
LINC01238-205ENST00000567549 PRR27Q6MZM9 219 aa12.27□□□□□ -0.45
LINC01238-205ENST00000567549 LINC00528Q8N1L1 170 aa12.27□□□□□ -0.45
LINC01238-205ENST00000567549 FAM30AQ9NZY2 134 aa12.27□□□□□ -0.45
LINC01238-205ENST00000567549 TRBV6-8A0A0A6YYG3 113 aa12.26□□□□□ -0.45
LINC01238-205ENST00000567549 C19orf71A6NCJ1 209 aa12.26□□□□□ -0.45
LINC01238-205ENST00000567549 P01737 135 aa12.26□□□□□ -0.45
LINC01238-205ENST00000567549 WFDC2Q14508 124 aa12.26□□□□□ -0.45
LINC01238-205ENST00000567549 CT83Q5H943 113 aa12.26□□□□□ -0.45
LINC01238-205ENST00000567549 FLG2Q5D862 2391 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms