RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 TRAV2A0A0B4J234 112 aa11.66□□□□□ -0.54
COMMD4-215ENST00000566843 Q6Q795 121 aa11.66□□□□□ -0.54
COMMD4-215ENST00000566843 TMEM219Q86XT9 240 aa11.66□□□□□ -0.54
COMMD4-215ENST00000566843 C9orf85Q96MD7 179 aa11.66□□□□□ -0.54
COMMD4-215ENST00000566843 MDFICQ9P1T7 246 aa11.66□□□□□ -0.54
COMMD4-215ENST00000566843 USMG5Q96IX5 58 aa11.66□□□□□ -0.54
COMMD4-215ENST00000566843 SPTBN1Q01082 2364 aaKnown RBP11.66□□□□□ -0.54
COMMD4-215ENST00000566843 TRBV30A0A0K0K1B3 111 aa11.65□□□□□ -0.54
COMMD4-215ENST00000566843 H3BUA1 57 aa11.65□□□□□ -0.54
COMMD4-215ENST00000566843 M0QY20 66 aa11.65□□□□□ -0.54
COMMD4-215ENST00000566843 RPL11P62913 178 aaKnown RBP11.65□□□□□ -0.54
COMMD4-215ENST00000566843 NTN5Q8WTR8 489 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-215ENST00000566843 OPRPNQ99935 248 aaPredicted RBP11.65□□□□□ -0.54
COMMD4-215ENST00000566843 RHPN1-AS1Q9BWJ2 59 aa11.65□□□□□ -0.54
COMMD4-215ENST00000566843 LMO4P61968 165 aa11.65□□□□□ -0.55
COMMD4-215ENST00000566843 ZNF843Q8N446 348 aa11.65□□□□□ -0.55
COMMD4-215ENST00000566843 ELANEP08246 267 aa11.64□□□□□ -0.55
COMMD4-215ENST00000566843 GAGE2BQ13066 116 aa11.64□□□□□ -0.55
COMMD4-215ENST00000566843 GAGE2EQ4V326 116 aa11.64□□□□□ -0.55
COMMD4-215ENST00000566843 GAGE2DQ9UEU5 116 aa11.64□□□□□ -0.55
COMMD4-215ENST00000566843 ZNF256Q9Y2P7 627 aaPredicted RBP11.64□□□□□ -0.55
COMMD4-215ENST00000566843 IGHV3-16A0A0C4DH30 117 aa11.63□□□□□ -0.55
COMMD4-215ENST00000566843 TRBV10-2A0A0K0K1G8 114 aa11.63□□□□□ -0.55
COMMD4-215ENST00000566843 SNCGO76070 127 aa11.63□□□□□ -0.55
COMMD4-215ENST00000566843 C20orf203Q8NBC4 194 aa11.63□□□□□ -0.55
COMMD4-215ENST00000566843 A0A0J9YXY3 114 aa11.63□□□□□ -0.55
COMMD4-215ENST00000566843 TRAV4A0A0B4J268 109 aa11.62□□□□□ -0.55
COMMD4-215ENST00000566843 NDUFV3P56181 108 aaKnown RBP11.62□□□□□ -0.55
COMMD4-215ENST00000566843 H7C2G1 150 aa11.62□□□□□ -0.55
COMMD4-215ENST00000566843 CRLF1O75462 422 aa11.62□□□□□ -0.55
COMMD4-215ENST00000566843 ODF3Q96PU9 254 aa11.62□□□□□ -0.55
COMMD4-215ENST00000566843 TNFRSF18Q9Y5U5 241 aa11.62□□□□□ -0.55
COMMD4-215ENST00000566843 ZNF462Q96JM2 2506 aa11.61□□□□□ -0.55
COMMD4-215ENST00000566843 IGKV3-7A0A075B6H7 116 aa11.61□□□□□ -0.55
COMMD4-215ENST00000566843 IGLV4-3A0A075B6K6 122 aa11.61□□□□□ -0.55
COMMD4-215ENST00000566843 TRAV12-3A0A0B4J271 114 aa11.61□□□□□ -0.55
COMMD4-215ENST00000566843 LITAFQ99732 161 aa11.61□□□□□ -0.55
COMMD4-215ENST00000566843 COL12A1Q99715 3063 aa11.61□□□□□ -0.55
COMMD4-215ENST00000566843 A0A0J9YXV3 536 aa11.61□□□□□ -0.55
COMMD4-215ENST00000566843 A0A1W2PPR1 153 aa11.61□□□□□ -0.55
COMMD4-215ENST00000566843 C19orf84I3L1E1 186 aa11.61□□□□□ -0.55
COMMD4-215ENST00000566843 ID1P41134 155 aa11.61□□□□□ -0.55
COMMD4-215ENST00000566843 LRBAP50851 2863 aa11.6□□□□□ -0.55
COMMD4-215ENST00000566843 TRAV8-4A0A0B4J246 113 aa11.6□□□□□ -0.55
COMMD4-215ENST00000566843 TRIAP1O43715 76 aa11.6□□□□□ -0.55
COMMD4-215ENST00000566843 IGHV3-11P01762 117 aa11.6□□□□□ -0.55
COMMD4-215ENST00000566843 Q1RN00 199 aa11.6□□□□□ -0.55
COMMD4-215ENST00000566843 FAM74A4Q5TZK3 123 aa11.6□□□□□ -0.55
COMMD4-215ENST00000566843 DAZ1Q9NQZ3 744 aaKnown RBP11.6□□□□□ -0.55
COMMD4-215ENST00000566843 I3L3M4 83 aa11.6□□□□□ -0.55
COMMD4-215ENST00000566843 ZNF56Q15929 161 aa11.6□□□□□ -0.55
COMMD4-215ENST00000566843 DCANP1Q8TF63 244 aa11.6□□□□□ -0.55
COMMD4-215ENST00000566843 IGHV3-64A0A075B6Q5 118 aa11.59□□□□□ -0.55
COMMD4-215ENST00000566843 IGHV4-39P01824 125 aa11.59□□□□□ -0.55
COMMD4-215ENST00000566843 IGHG2P01859 326 aa11.59□□□□□ -0.55
COMMD4-215ENST00000566843 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.55
COMMD4-215ENST00000566843 B5MCH6 92 aa11.58□□□□□ -0.55
COMMD4-215ENST00000566843 H3BMM0 161 aa11.58□□□□□ -0.55
COMMD4-215ENST00000566843 K7EMT4 169 aa11.58□□□□□ -0.55
COMMD4-215ENST00000566843 IGHV3-30-3P0DP02 117 aa11.58□□□□□ -0.55
COMMD4-215ENST00000566843 IFITM1P13164 125 aa11.58□□□□□ -0.55
COMMD4-215ENST00000566843 UBE2WQ96B02 151 aa11.58□□□□□ -0.55
COMMD4-215ENST00000566843 SPANXDQ9BXN6 97 aa11.58□□□□□ -0.55
COMMD4-215ENST00000566843 SPANXCQ9NY87 97 aa11.58□□□□□ -0.55
COMMD4-215ENST00000566843 MED13LQ71F56 2210 aa11.58□□□□□ -0.56
COMMD4-215ENST00000566843 MRPL23Q16540 153 aaKnown RBP11.58□□□□□ -0.56
COMMD4-215ENST00000566843 ZNF580Q9UK33 172 aa11.58□□□□□ -0.56
COMMD4-215ENST00000566843 PYGO1Q9Y3Y4 419 aa11.58□□□□□ -0.56
COMMD4-215ENST00000566843 TTC32Q5I0X7 151 aa11.57□□□□□ -0.56
COMMD4-215ENST00000566843 BPESC1Q9GZL8 116 aa11.57□□□□□ -0.56
COMMD4-215ENST00000566843 GAGE12JA6NER3 117 aa11.57□□□□□ -0.56
COMMD4-215ENST00000566843 GAGE7O76087 117 aa11.57□□□□□ -0.56
COMMD4-215ENST00000566843 GAGE12FP0CL80 117 aa11.57□□□□□ -0.56
COMMD4-215ENST00000566843 GAGE12GP0CL81 117 aa11.57□□□□□ -0.56
COMMD4-215ENST00000566843 GAGE12IP0CL82 117 aa11.57□□□□□ -0.56
COMMD4-215ENST00000566843 GAGE4Q13068 117 aa11.57□□□□□ -0.56
COMMD4-215ENST00000566843 C15orf53Q8NAA6 179 aa11.57□□□□□ -0.56
COMMD4-215ENST00000566843 FAM104AQ969W3 186 aa11.57□□□□□ -0.56
COMMD4-215ENST00000566843 HRNRQ86YZ3 2850 aaPredicted RBP11.57□□□□□ -0.56
COMMD4-215ENST00000566843 H3BT86 120 aa11.56□□□□□ -0.56
COMMD4-215ENST00000566843 MRPS36P82909 103 aaKnown RBP11.56□□□□□ -0.56
COMMD4-215ENST00000566843 ICOSQ9Y6W8 199 aa11.56□□□□□ -0.56
COMMD4-215ENST00000566843 H7C423 109 aa11.56□□□□□ -0.56
COMMD4-215ENST00000566843 PF4V1P10720 104 aa11.56□□□□□ -0.56
COMMD4-215ENST00000566843 DEFB121Q5J5C9 76 aa11.56□□□□□ -0.56
COMMD4-215ENST00000566843 TIMM21Q9BVV7 248 aa11.56□□□□□ -0.56
COMMD4-215ENST00000566843 EDA2RQ9HAV5 297 aa11.56□□□□□ -0.56
COMMD4-215ENST00000566843 BEX4Q9NWD9 120 aaPredicted RBP11.56□□□□□ -0.56
COMMD4-215ENST00000566843 FLNCQ14315 2725 aa11.56□□□□□ -0.56
COMMD4-215ENST00000566843 SPTAN1Q13813 2472 aaKnown RBP11.55□□□□□ -0.56
COMMD4-215ENST00000566843 IGHV3OR16-10A0A075B7F0 116 aa11.55□□□□□ -0.56
COMMD4-215ENST00000566843 IGLV1-40P01703 118 aa11.55□□□□□ -0.56
COMMD4-215ENST00000566843 EDN2P20800 178 aa11.55□□□□□ -0.56
COMMD4-215ENST00000566843 C2orf82Q6UX34 121 aa11.55□□□□□ -0.56
COMMD4-215ENST00000566843 IGHV1OR15-1A0A075B7D0 117 aa11.55□□□□□ -0.56
COMMD4-215ENST00000566843 SMIM20Q8N5G0 67 aa11.55□□□□□ -0.56
COMMD4-215ENST00000566843 CCDC179H3BU77 68 aa11.54□□□□□ -0.56
COMMD4-215ENST00000566843 SPXQ9BT56 116 aa11.54□□□□□ -0.56
COMMD4-215ENST00000566843 MYO18BQ8IUG5 2567 aa11.54□□□□□ -0.56
COMMD4-215ENST00000566843 USP9XQ93008 2570 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms