RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 CFAP126Q5VTH2 177 aa10.55□□□□□ -0.72
CDH1-209ENST00000566510 TRPT1Q86TN4 253 aaKnown RBP10.55□□□□□ -0.72
CDH1-209ENST00000566510 SLC25A29Q8N8R3 303 aa10.55□□□□□ -0.72
CDH1-209ENST00000566510 PTH2Q96A98 100 aa10.55□□□□□ -0.72
CDH1-209ENST00000566510 TRBV6-5A0A0K0K1A5 114 aa10.54□□□□□ -0.72
CDH1-209ENST00000566510 IGHV3-30P01768 117 aa10.54□□□□□ -0.72
CDH1-209ENST00000566510 IGHV3-30-5P0DP03 117 aa10.54□□□□□ -0.72
CDH1-209ENST00000566510 CUBNO60494 3623 aa10.54□□□□□ -0.72
CDH1-209ENST00000566510 DOPEY1Q5JWR5 2465 aa10.54□□□□□ -0.72
CDH1-209ENST00000566510 H7C2G1 150 aa10.54□□□□□ -0.72
CDH1-209ENST00000566510 K7EQG2 157 aa10.54□□□□□ -0.72
CDH1-209ENST00000566510 SMCPP49901 116 aaPredicted RBP10.54□□□□□ -0.72
CDH1-209ENST00000566510 FOXI1Q12951 378 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 RAX2Q96IS3 184 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 P0DMU3 169 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 FAM231AP0DMU4 169 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 FAM231CP0DMU5 169 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 LYRM7Q5U5X0 104 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 C1QTNF4Q9BXJ3 329 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 VCX2Q9H322 139 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 ACACBO00763 2458 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 FAM208BQ5VWN6 2430 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 MXRA5Q9NR99 2828 aa10.53□□□□□ -0.72
CDH1-209ENST00000566510 TRAV2A0A0B4J234 112 aa10.52□□□□□ -0.72
CDH1-209ENST00000566510 I3L3M4 83 aa10.52□□□□□ -0.72
CDH1-209ENST00000566510 TCL1BO95988 128 aa10.52□□□□□ -0.72
CDH1-209ENST00000566510 SPATA25Q9BR10 227 aa10.52□□□□□ -0.72
CDH1-209ENST00000566510 CACNA1AO00555 2505 aa10.52□□□□□ -0.72
CDH1-209ENST00000566510 A0A0J9YXV3 536 aa10.52□□□□□ -0.73
CDH1-209ENST00000566510 UBE2D3P61077 147 aa10.52□□□□□ -0.73
CDH1-209ENST00000566510 UBE2D2P62837 147 aa10.52□□□□□ -0.73
CDH1-209ENST00000566510 NACAE9PAV3 2078 aa10.52□□□□□ -0.73
CDH1-209ENST00000566510 MYO9AB2RTY4 2548 aa10.52□□□□□ -0.73
CDH1-209ENST00000566510 RHOHQ15669 191 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 NSUN5P1Q3KNT7 163 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 NFE4Q86UQ8 179 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 C20orf203Q8NBC4 194 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 ODF3Q96PU9 254 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 PRO1854Q9UHT4 67 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 PRM2P04554 102 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 C10orf126Q8N4M7 172 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 A4D1N5 150 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 AMELXQ99217 191 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 SPXQ9BT56 116 aa10.51□□□□□ -0.73
CDH1-209ENST00000566510 TMEM223A0PJW6 202 aa10.5□□□□□ -0.73
CDH1-209ENST00000566510 KNCNA6PVL3 124 aa10.5□□□□□ -0.73
CDH1-209ENST00000566510 HOXD3P31249 432 aaPredicted RBP10.5□□□□□ -0.73
CDH1-209ENST00000566510 PROK1P58294 105 aa10.5□□□□□ -0.73
CDH1-209ENST00000566510 ZNF580Q9UK33 172 aa10.5□□□□□ -0.73
CDH1-209ENST00000566510 PRRC2AP48634 2157 aaKnown RBP10.5□□□□□ -0.73
CDH1-209ENST00000566510 ADARB2-AS1A8MUL3 147 aa10.5□□□□□ -0.73
CDH1-209ENST00000566510 RHODO00212 210 aa10.5□□□□□ -0.73
CDH1-209ENST00000566510 LEPROTO15243 131 aa10.5□□□□□ -0.73
CDH1-209ENST00000566510 RNASE13Q5GAN3 156 aaKnown RBP10.5□□□□□ -0.73
CDH1-209ENST00000566510 ZNF22P17026 224 aaPredicted RBP10.49□□□□□ -0.73
CDH1-209ENST00000566510 CEMP1Q6PRD7 247 aaPredicted RBP10.49□□□□□ -0.73
CDH1-209ENST00000566510 IGSF10Q6WRI0 2623 aa10.49□□□□□ -0.73
CDH1-209ENST00000566510 IGLV4-3A0A075B6K6 122 aa10.49□□□□□ -0.73
CDH1-209ENST00000566510 TRGV11A0A075B6L2 103 aa10.49□□□□□ -0.73
CDH1-209ENST00000566510 DEFB136Q30KP8 78 aa10.49□□□□□ -0.73
CDH1-209ENST00000566510 CD28P10747 220 aa10.48□□□□□ -0.73
CDH1-209ENST00000566510 TCTEX1D4Q5JR98 221 aa10.48□□□□□ -0.73
CDH1-209ENST00000566510 NOTCH3Q9UM47 2321 aa10.48□□□□□ -0.73
CDH1-209ENST00000566510 TRBV20-1A0A075B6N2 111 aa10.48□□□□□ -0.73
CDH1-209ENST00000566510 RBMY1A1P0DJD3 496 aaKnown RBP10.48□□□□□ -0.73
CDH1-209ENST00000566510 RBMY1CP0DJD4 496 aa10.48□□□□□ -0.73
CDH1-209ENST00000566510 SCGB1A1P11684 91 aa10.48□□□□□ -0.73
CDH1-209ENST00000566510 RBMY1FQ15415 496 aaKnown RBP10.48□□□□□ -0.73
CDH1-209ENST00000566510 Q1RN00 199 aa10.48□□□□□ -0.73
CDH1-209ENST00000566510 MUSTN1Q8IVN3 82 aa10.48□□□□□ -0.73
CDH1-209ENST00000566510 GATA3P23771 443 aa10.47□□□□□ -0.73
CDH1-209ENST00000566510 DEFB131AP59861 70 aa10.47□□□□□ -0.73
CDH1-209ENST00000566510 PIEZO1Q92508 2521 aa10.47□□□□□ -0.73
CDH1-209ENST00000566510 A8MWV9 139 aa10.47□□□□□ -0.73
CDH1-209ENST00000566510 LINC01356Q8N9X3 169 aa10.47□□□□□ -0.73
CDH1-209ENST00000566510 TNFRSF18Q9Y5U5 241 aa10.47□□□□□ -0.73
CDH1-209ENST00000566510 PRSS2P07478 247 aa10.46□□□□□ -0.73
CDH1-209ENST00000566510 ATP6V0E2Q8NHE4 81 aa10.46□□□□□ -0.73
CDH1-209ENST00000566510 DUX3Q96PT4 197 aa10.46□□□□□ -0.73
CDH1-209ENST00000566510 WNK1Q9H4A3 2382 aa10.46□□□□□ -0.74
CDH1-209ENST00000566510 SVIPQ8NHG7 77 aa10.46□□□□□ -0.74
CDH1-209ENST00000566510 ERG28Q9UKR5 140 aa10.46□□□□□ -0.74
CDH1-209ENST00000566510 TRAV8-3A0A0A6YYJ7 113 aa10.45□□□□□ -0.74
CDH1-209ENST00000566510 SLURP1P55000 103 aa10.45□□□□□ -0.74
CDH1-209ENST00000566510 TEN1Q86WV5 123 aa10.45□□□□□ -0.74
CDH1-209ENST00000566510 BEX4Q9NWD9 120 aaPredicted RBP10.45□□□□□ -0.74
CDH1-209ENST00000566510 Q9UF83 564 aa10.45□□□□□ -0.74
CDH1-209ENST00000566510 TEX15Q9BXT5 2789 aa10.45□□□□□ -0.74
CDH1-209ENST00000566510 C18orf65Q6ZTR6 163 aa10.45□□□□□ -0.74
CDH1-209ENST00000566510 TIMM21Q9BVV7 248 aa10.45□□□□□ -0.74
CDH1-209ENST00000566510 TLN2Q9Y4G6 2542 aa10.45□□□□□ -0.74
CDH1-209ENST00000566510 IGHV3-30-3P0DP02 117 aa10.44□□□□□ -0.74
CDH1-209ENST00000566510 PPDPFLQ8WWR9 84 aa10.44□□□□□ -0.74
CDH1-209ENST00000566510 CARD19Q96LW7 228 aa10.44□□□□□ -0.74
CDH1-209ENST00000566510 TMEM89A2RUT3 159 aa10.44□□□□□ -0.74
CDH1-209ENST00000566510 C9JAW5 83 aa10.44□□□□□ -0.74
CDH1-209ENST00000566510 KHDC1LQ5JSQ8 128 aa10.44□□□□□ -0.74
CDH1-209ENST00000566510 VPREB3Q9UKI3 123 aa10.44□□□□□ -0.74
CDH1-209ENST00000566510 LRRK2Q5S007 2527 aa10.44□□□□□ -0.74
CDH1-209ENST00000566510 IGHV3-33P01772 117 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms