RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 TET2Q6N021 2002 aaPredicted RBP6.81□□□□□ -1.32
CDH1-205ENST00000562836 IGKV3-11P04433 115 aa6.81□□□□□ -1.32
CDH1-205ENST00000562836 Q86TA4 180 aa6.81□□□□□ -1.32
CDH1-205ENST00000562836 AMELXQ99217 191 aa6.81□□□□□ -1.32
CDH1-205ENST00000562836 IGLV2-18A0A075B6J9 118 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 IGKV1OR2-108A0A075B7D4 117 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 SDHAF1A6NFY7 115 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 C11orf86A6NJI1 115 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 C2orf83Q53S99 150 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 RNF185Q96GF1 192 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 TMEM141Q96I45 108 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 HCG22E2RYF7 251 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 Q0VFX4 171 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 DYNLRB2Q8TF09 96 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 FOXL2NBQ6ZUU3 175 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 C11orf72Q8NBR9 251 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 ADAMTS9Q9P2N4 1935 aa6.8□□□□□ -1.32
CDH1-205ENST00000562836 TRAV10A0A0B4J240 114 aa6.79□□□□□ -1.32
CDH1-205ENST00000562836 ZNF503-AS2A6NEH8 195 aa6.79□□□□□ -1.32
CDH1-205ENST00000562836 KLLNB2CW77 178 aa6.79□□□□□ -1.32
CDH1-205ENST00000562836 BRWD1-AS2P59051 145 aa6.79□□□□□ -1.32
CDH1-205ENST00000562836 MSRB1Q9NZV6 116 aa6.79□□□□□ -1.32
CDH1-205ENST00000562836 Q6ZTC4 211 aa6.79□□□□□ -1.32
CDH1-205ENST00000562836 CEP290O15078 2479 aa6.79□□□□□ -1.32
CDH1-205ENST00000562836 C17orf82Q86X59 251 aaPredicted RBP6.78□□□□□ -1.32
CDH1-205ENST00000562836 BBC3Q96PG8 261 aaPredicted RBP6.78□□□□□ -1.32
CDH1-205ENST00000562836 DSCAMO60469 2012 aa6.78□□□□□ -1.32
CDH1-205ENST00000562836 IGKV3D-11A0A0A0MRZ8 115 aa6.78□□□□□ -1.32
CDH1-205ENST00000562836 H0Y9J4 135 aa6.78□□□□□ -1.32
CDH1-205ENST00000562836 PRYO14603 147 aa6.78□□□□□ -1.32
CDH1-205ENST00000562836 IGLV3-1P01715 115 aa6.78□□□□□ -1.32
CDH1-205ENST00000562836 C6orf99Q4VX62 202 aa6.78□□□□□ -1.32
CDH1-205ENST00000562836 TRANK1O15050 2925 aa6.78□□□□□ -1.32
CDH1-205ENST00000562836 IGLV3-12A0A075B6K2 115 aa6.77□□□□□ -1.33
CDH1-205ENST00000562836 COX7A2P2O60397 106 aa6.77□□□□□ -1.33
CDH1-205ENST00000562836 B3GALT5-AS1P59052 145 aa6.77□□□□□ -1.33
CDH1-205ENST00000562836 hDV103S1A0JD37 113 aa6.77□□□□□ -1.33
CDH1-205ENST00000562836 BCE1O60756 84 aa6.77□□□□□ -1.33
CDH1-205ENST00000562836 CRIP1P50238 77 aa6.77□□□□□ -1.33
CDH1-205ENST00000562836 C9orf129Q5T035 196 aaKnown RBP6.77□□□□□ -1.33
CDH1-205ENST00000562836 CHKB-CPT1BH3BT56 60 aa6.76□□□□□ -1.33
CDH1-205ENST00000562836 C10orf113Q5VZT2 155 aa6.76□□□□□ -1.33
CDH1-205ENST00000562836 CNTRLQ7Z7A1 2325 aa6.76□□□□□ -1.33
CDH1-205ENST00000562836 CEP192Q8TEP8 1941 aa6.76□□□□□ -1.33
CDH1-205ENST00000562836 PINLYPA6NC86 204 aa6.76□□□□□ -1.33
CDH1-205ENST00000562836 PRB1P04280 392 aa6.76□□□□□ -1.33
CDH1-205ENST00000562836 CD28P10747 220 aa6.76□□□□□ -1.33
CDH1-205ENST00000562836 PRAC1Q96KF2 57 aa6.76□□□□□ -1.33
CDH1-205ENST00000562836 ZNF407Q9C0G0 2248 aa6.76□□□□□ -1.33
CDH1-205ENST00000562836 FOLR3P41439 243 aa6.75□□□□□ -1.33
CDH1-205ENST00000562836 IGIPA6NJ69 53 aa6.75□□□□□ -1.33
CDH1-205ENST00000562836 RNASE13Q5GAN3 156 aaKnown RBP6.75□□□□□ -1.33
CDH1-205ENST00000562836 PIK3CD-AS1Q5SR53 167 aa6.75□□□□□ -1.33
CDH1-205ENST00000562836 ARRDC1-AS1Q9H2J1 176 aa6.75□□□□□ -1.33
CDH1-205ENST00000562836 Q9HAA7 133 aa6.75□□□□□ -1.33
CDH1-205ENST00000562836 MYO15AQ9UKN7 3530 aa6.75□□□□□ -1.33
CDH1-205ENST00000562836 USF3Q68DE3 2245 aa6.75□□□□□ -1.33
CDH1-205ENST00000562836 IGLV2-11P01706 119 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 Q5VV11 94 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 TMEM190Q8WZ59 177 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 IGHV3-64A0A075B6Q5 118 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 S100A4P26447 101 aaKnown RBP6.74□□□□□ -1.33
CDH1-205ENST00000562836 IGLV4-69A0A075B6H9 119 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 TRBV7-4A0A0J9YYF1 115 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 K7EQG2 157 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 C19orf54Q5BKX5 351 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 ATP5EP2Q5VTU8 51 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 HCP5Q6MZN7 132 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 PATE2Q6UY27 113 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 TMEM254Q8TBM7 123 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 TMEM14BQ9NUH8 114 aa6.74□□□□□ -1.33
CDH1-205ENST00000562836 TRIOO75962 3097 aa6.73□□□□□ -1.33
CDH1-205ENST00000562836 SPTY2D1-AS1A0A0U1RR47 76 aa6.73□□□□□ -1.33
CDH1-205ENST00000562836 ARFGEF3Q5TH69 2177 aa6.73□□□□□ -1.33
CDH1-205ENST00000562836 LYPD1Q8N2G4 141 aa6.73□□□□□ -1.33
CDH1-205ENST00000562836 RP1P56715 2156 aa6.73□□□□□ -1.33
CDH1-205ENST00000562836 SDK2Q58EX2 2172 aa6.73□□□□□ -1.33
CDH1-205ENST00000562836 J3QL48 77 aa6.72□□□□□ -1.33
CDH1-205ENST00000562836 C18orf65Q6ZTR6 163 aa6.72□□□□□ -1.33
CDH1-205ENST00000562836 TMEM61Q8N0U2 210 aa6.72□□□□□ -1.33
CDH1-205ENST00000562836 ZFAND3Q9H8U3 227 aa6.72□□□□□ -1.33
CDH1-205ENST00000562836 ZNF318Q5VUA4 2279 aa6.72□□□□□ -1.33
CDH1-205ENST00000562836 CXCL6P80162 114 aa6.72□□□□□ -1.33
CDH1-205ENST00000562836 PRSS33Q8NF86 280 aa6.72□□□□□ -1.33
CDH1-205ENST00000562836 A0A0J9YXY3 114 aa6.71□□□□□ -1.33
CDH1-205ENST00000562836 VCANP13611 3396 aa6.71□□□□□ -1.34
CDH1-205ENST00000562836 LY6HO94772 140 aa6.71□□□□□ -1.34
CDH1-205ENST00000562836 ZNF575Q86XF7 245 aa6.71□□□□□ -1.34
CDH1-205ENST00000562836 C8orf49Q96NF6 230 aa6.71□□□□□ -1.34
CDH1-205ENST00000562836 MUC4Q99102 2169 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 GNRH2O43555 120 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 PRM2P04554 102 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 TFF2Q03403 129 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 C2orf66Q6UXQ4 117 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 TRAV21A0A0B4J279 112 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 B4DSR2 109 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 K7EQD1 137 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 C1orf64Q8NEQ6 169 aa6.7□□□□□ -1.34
CDH1-205ENST00000562836 ZNF625Q96I27 306 aaPredicted RBP6.7□□□□□ -1.34
CDH1-205ENST00000562836 FAM218AQ96MZ4 157 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms