RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 NTF3P20783 257 aa12.9□□□□□ -0.34
PPP4C-202ENST00000561610 UFSP1Q6NVU6 142 aa12.9□□□□□ -0.34
PPP4C-202ENST00000561610 GTSF1Q8WW33 167 aa12.9□□□□□ -0.34
PPP4C-202ENST00000561610 PPP1R2P9O14990 202 aa12.89□□□□□ -0.35
PPP4C-202ENST00000561610 CTRLP40313 264 aa12.89□□□□□ -0.35
PPP4C-202ENST00000561610 FAM3BP58499 235 aaPredicted RBP12.89□□□□□ -0.35
PPP4C-202ENST00000561610 CT83Q5H943 113 aa12.89□□□□□ -0.35
PPP4C-202ENST00000561610 LYPD5Q6UWN5 251 aa12.88□□□□□ -0.35
PPP4C-202ENST00000561610 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
PPP4C-202ENST00000561610 SH2D6Q7Z4S9 175 aa12.88□□□□□ -0.35
PPP4C-202ENST00000561610 TSKUQ8WUA8 353 aa12.88□□□□□ -0.35
PPP4C-202ENST00000561610 NIT2Q9NQR4 276 aa12.88□□□□□ -0.35
PPP4C-202ENST00000561610 VPS13DQ5THJ4 4388 aa12.88□□□□□ -0.35
PPP4C-202ENST00000561610 RAB4BP61018 213 aa12.88□□□□□ -0.35
PPP4C-202ENST00000561610 MRPS16Q9Y3D3 137 aaKnown RBP12.88□□□□□ -0.35
PPP4C-202ENST00000561610 V9GYV3 84 aa12.88□□□□□ -0.35
PPP4C-202ENST00000561610 HECTD4Q9Y4D8 3996 aa12.87□□□□□ -0.35
PPP4C-202ENST00000561610 HIGD1CA8MV81 97 aa12.87□□□□□ -0.35
PPP4C-202ENST00000561610 EVI2AP22794 236 aa12.87□□□□□ -0.35
PPP4C-202ENST00000561610 KCNIP4Q6PIL6 250 aa12.87□□□□□ -0.35
PPP4C-202ENST00000561610 ATP6V0E2Q8NHE4 81 aa12.87□□□□□ -0.35
PPP4C-202ENST00000561610 ZNRF2Q8NHG8 242 aa12.87□□□□□ -0.35
PPP4C-202ENST00000561610 NDUFA6P56556 154 aa12.86□□□□□ -0.35
PPP4C-202ENST00000561610 RPL36AP83881 106 aaKnown RBP12.86□□□□□ -0.35
PPP4C-202ENST00000561610 WDR73Q6P4I2 378 aa12.86□□□□□ -0.35
PPP4C-202ENST00000561610 RPL36ALQ969Q0 106 aaKnown RBP12.86□□□□□ -0.35
PPP4C-202ENST00000561610 DPH3P1Q9H4G8 78 aa12.86□□□□□ -0.35
PPP4C-202ENST00000561610 Q9H8V8 135 aa12.86□□□□□ -0.35
PPP4C-202ENST00000561610 KIAA1109Q2LD37 5005 aa12.85□□□□□ -0.35
PPP4C-202ENST00000561610 IMMP2LQ96T52 175 aa12.85□□□□□ -0.35
PPP4C-202ENST00000561610 GFRA4Q9GZZ7 299 aa12.85□□□□□ -0.35
PPP4C-202ENST00000561610 Q9UF83 564 aa12.85□□□□□ -0.35
PPP4C-202ENST00000561610 TGIF2-C20orf24A0A0A6YYL0 155 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST1H2BKO60814 126 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST1H2BJP06899 126 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST1H2BOP23527 126 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST1H2BBP33778 126 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST1H2BDP58876 126 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST1H2BCP62807 126 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST2H2BEQ16778 126 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 OR10J3Q5JRS4 329 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST1H2BHQ93079 126 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST1H2BNQ99877 126 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 HIST1H2BMQ99879 126 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 NAT8BQ9UHF3 227 aa12.84□□□□□ -0.35
PPP4C-202ENST00000561610 TRBV10-1A0A0K0K1A3 114 aa12.83□□□□□ -0.36
PPP4C-202ENST00000561610 A0A1B0GUT8 65 aa12.83□□□□□ -0.36
PPP4C-202ENST00000561610 SIVA1O15304 175 aa12.83□□□□□ -0.36
PPP4C-202ENST00000561610 UPK3BQ9BT76 320 aa12.83□□□□□ -0.36
PPP4C-202ENST00000561610 KIF25-AS1Q9Y6Z4 181 aa12.83□□□□□ -0.36
PPP4C-202ENST00000561610 URGCP-MRPS24S4R325 110 aa12.83□□□□□ -0.36
PPP4C-202ENST00000561610 FAM231BA6NCW3 169 aa12.82□□□□□ -0.36
PPP4C-202ENST00000561610 H7C1H1 209 aa12.82□□□□□ -0.36
PPP4C-202ENST00000561610 SUMO4Q6EEV6 95 aa12.82□□□□□ -0.36
PPP4C-202ENST00000561610 NUP35Q8NFH5 326 aa12.82□□□□□ -0.36
PPP4C-202ENST00000561610 CNFNQ9BYD5 112 aa12.82□□□□□ -0.36
PPP4C-202ENST00000561610 GTSF1LQ9H1H1 148 aa12.82□□□□□ -0.36
PPP4C-202ENST00000561610 DNAH10Q8IVF4 4471 aa12.81□□□□□ -0.36
PPP4C-202ENST00000561610 TRAV8-6A0A0B4J262 113 aa12.81□□□□□ -0.36
PPP4C-202ENST00000561610 FOXA3P55318 350 aaPredicted RBP12.81□□□□□ -0.36
PPP4C-202ENST00000561610 RIGQ13278 110 aa12.81□□□□□ -0.36
PPP4C-202ENST00000561610 NEXN-AS1Q8NBZ9 246 aa12.81□□□□□ -0.36
PPP4C-202ENST00000561610 TRBV7-3A0A075B6L6 115 aa12.8□□□□□ -0.36
PPP4C-202ENST00000561610 TRAV9-1A0A075B6T8 112 aa12.8□□□□□ -0.36
PPP4C-202ENST00000561610 NBDYA0A0U1RRE5 68 aa12.8□□□□□ -0.36
PPP4C-202ENST00000561610 TRGC2P03986 189 aa12.8□□□□□ -0.36
PPP4C-202ENST00000561610 WFDC10BQ8IUB3 73 aa12.8□□□□□ -0.36
PPP4C-202ENST00000561610 HIST3H2BBQ8N257 126 aa12.8□□□□□ -0.36
PPP4C-202ENST00000561610 TNFRSF18Q9Y5U5 241 aa12.8□□□□□ -0.36
PPP4C-202ENST00000561610 KMT2AQ03164 3969 aa12.79□□□□□ -0.36
PPP4C-202ENST00000561610 IGHV3-38A0A0C4DH36 116 aa12.79□□□□□ -0.36
PPP4C-202ENST00000561610 LINC00315P59091 139 aa12.79□□□□□ -0.36
PPP4C-202ENST00000561610 COA6Q5JTJ3 125 aaKnown RBP12.79□□□□□ -0.36
PPP4C-202ENST00000561610 SMIM27A0A1W2PRY6 76 aa12.78□□□□□ -0.36
PPP4C-202ENST00000561610 TTC32Q5I0X7 151 aa12.78□□□□□ -0.36
PPP4C-202ENST00000561610 LELP1Q5T871 98 aa12.78□□□□□ -0.36
PPP4C-202ENST00000561610 TRAV26-2A0A0B4J265 109 aa12.77□□□□□ -0.37
PPP4C-202ENST00000561610 LINC00694P0DN24 101 aa12.77□□□□□ -0.37
PPP4C-202ENST00000561610 RASL11AQ6T310 242 aa12.77□□□□□ -0.37
PPP4C-202ENST00000561610 M0QY20 66 aa12.76□□□□□ -0.37
PPP4C-202ENST00000561610 CAMPP49913 170 aa12.76□□□□□ -0.37
PPP4C-202ENST00000561610 TIRAPP58753 221 aa12.76□□□□□ -0.37
PPP4C-202ENST00000561610 UBE2D3P61077 147 aa12.76□□□□□ -0.37
PPP4C-202ENST00000561610 UBE2D2P62837 147 aa12.76□□□□□ -0.37
PPP4C-202ENST00000561610 MRPL54Q6P161 138 aaKnown RBP12.76□□□□□ -0.37
PPP4C-202ENST00000561610 FRZBQ92765 325 aa12.76□□□□□ -0.37
PPP4C-202ENST00000561610 DNAH6Q9C0G6 4158 aa12.76□□□□□ -0.37
PPP4C-202ENST00000561610 TRAV9-2A0A087WT02 112 aa12.75□□□□□ -0.37
PPP4C-202ENST00000561610 TSTD3H0UI37 97 aa12.75□□□□□ -0.37
PPP4C-202ENST00000561610 C1orf134Q5TEV5 83 aa12.75□□□□□ -0.37
PPP4C-202ENST00000561610 DNAJC30Q96LL9 226 aa12.75□□□□□ -0.37
PPP4C-202ENST00000561610 LINC00587B1AMM8 73 aa12.74□□□□□ -0.37
PPP4C-202ENST00000561610 PHOX2AO14813 284 aa12.74□□□□□ -0.37
PPP4C-202ENST00000561610 Q6ZR54 194 aa12.74□□□□□ -0.37
PPP4C-202ENST00000561610 OR10D4PQ8NGN7 298 aa12.74□□□□□ -0.37
PPP4C-202ENST00000561610 TMEM191AQ9H0A3 160 aa12.74□□□□□ -0.37
PPP4C-202ENST00000561610 IGHV3-30P01768 117 aa12.73□□□□□ -0.37
PPP4C-202ENST00000561610 IGHV3-33P01772 117 aa12.73□□□□□ -0.37
PPP4C-202ENST00000561610 IGHV3-30-3P0DP02 117 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms