RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 EDDM3BP56851 147 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 TMEM128Q5BJH2 165 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 OR8I2Q8N0Y5 310 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 DNAJC15Q9Y5T4 150 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 TSC2P49815 1807 aa-0.52□□□□□ -2.49
USP8-218ENST00000561330 SIPA1L3O60292 1781 aaPredicted RBP-0.52□□□□□ -2.49
USP8-218ENST00000561330 URB1O60287 2271 aaKnown RBP-0.53□□□□□ -2.49
USP8-218ENST00000561330 OVOS2A0A0G2JMS6 1433 aa-0.53□□□□□ -2.49
USP8-218ENST00000561330 LOC730098B7Z3J9 87 aa-0.53□□□□□ -2.49
USP8-218ENST00000561330 PIN1P1O15428 100 aa-0.53□□□□□ -2.49
USP8-218ENST00000561330 YPEL1O60688 119 aa-0.53□□□□□ -2.49
USP8-218ENST00000561330 HLA-DRB4P13762 266 aa-0.53□□□□□ -2.49
USP8-218ENST00000561330 TMEM244Q5VVB8 128 aa-0.53□□□□□ -2.49
USP8-218ENST00000561330 SCN3BQ9NY72 215 aa-0.53□□□□□ -2.49
USP8-218ENST00000561330 SPCS1Q9Y6A9 102 aa-0.53□□□□□ -2.49
USP8-218ENST00000561330 HLA-DRB4X5D2U9 266 aa-0.53□□□□□ -2.49
USP8-218ENST00000561330 KDM3BQ7LBC6 1761 aa-0.54□□□□□ -2.5
USP8-218ENST00000561330 CHD8Q9HCK8 2581 aa-0.54□□□□□ -2.5
USP8-218ENST00000561330 A0A1B0GV72 72 aa-0.54□□□□□ -2.5
USP8-218ENST00000561330 A6NIN4 97 aa-0.54□□□□□ -2.5
USP8-218ENST00000561330 CMPK1P30085 196 aa-0.54□□□□□ -2.5
USP8-218ENST00000561330 RPL7L1Q6DKI1 246 aaKnown RBP-0.54□□□□□ -2.5
USP8-218ENST00000561330 TOMM20LQ6UXN7 152 aa-0.54□□□□□ -2.5
USP8-218ENST00000561330 UHRF1BP1LA0JNW5 1464 aa-0.54□□□□□ -2.5
USP8-218ENST00000561330 PI4KAP42356 2102 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 NBEAL1Q6ZS30 2694 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 J3KT08 172 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 K7EQZ3 153 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 HAMPP81172 84 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 PPP1R2P3Q6NXS1 205 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 ATP11AUNQ6ZP68 121 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 MAGOHBQ96A72 148 aaKnown RBP-0.55□□□□□ -2.5
USP8-218ENST00000561330 WFDC6Q9BQY6 131 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 RPRMQ9NS64 109 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 NDUFA12Q9UI09 145 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 LSM2Q9Y333 95 aaKnown RBP-0.55□□□□□ -2.5
USP8-218ENST00000561330 PDZD2O15018 2839 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 ARAP1Q96P48 1450 aa-0.55□□□□□ -2.5
USP8-218ENST00000561330 GOLGA4Q13439 2230 aaKnown RBP-0.56□□□□□ -2.5
USP8-218ENST00000561330 IBTKQ9P2D0 1353 aaPredicted RBP-0.56□□□□□ -2.5
USP8-218ENST00000561330 EP300Q09472 2414 aaPredicted RBP-0.56□□□□□ -2.5
USP8-218ENST00000561330 STAB2Q8WWQ8 2551 aa-0.56□□□□□ -2.5
USP8-218ENST00000561330 MAP1AP78559 2803 aaPredicted RBP-0.56□□□□□ -2.5
USP8-218ENST00000561330 M0R2P5 195 aa-0.56□□□□□ -2.5
USP8-218ENST00000561330 S100A3P33764 101 aa-0.56□□□□□ -2.5
USP8-218ENST00000561330 DCDP81605 110 aaKnown RBP-0.56□□□□□ -2.5
USP8-218ENST00000561330 CFAP126Q5VTH2 177 aa-0.56□□□□□ -2.5
USP8-218ENST00000561330 BAGE3Q86Y29 109 aa-0.56□□□□□ -2.5
USP8-218ENST00000561330 TCTE3Q8IZS6 198 aa-0.56□□□□□ -2.5
USP8-218ENST00000561330 SKA2Q8WVK7 121 aaPredicted RBP-0.56□□□□□ -2.5
USP8-218ENST00000561330 V9GYQ6 96 aa-0.56□□□□□ -2.5
USP8-218ENST00000561330 ERCC6Q03468 1493 aa-0.56□□□□□ -2.5
USP8-218ENST00000561330 PBRM1Q86U86 1689 aa-0.56□□□□□ -2.5
USP8-218ENST00000561330 ZNF609O15014 1411 aa-0.56□□□□□ -2.5
USP8-218ENST00000561330 DNAJC13O75165 2243 aa-0.57□□□□□ -2.5
USP8-218ENST00000561330 ZMYM4Q5VZL5 1548 aa-0.57□□□□□ -2.5
USP8-218ENST00000561330 BCE1O60756 84 aa-0.57□□□□□ -2.5
USP8-218ENST00000561330 SPRR2BP35325 72 aa-0.57□□□□□ -2.5
USP8-218ENST00000561330 SPANXN1Q5VSR9 72 aa-0.57□□□□□ -2.5
USP8-218ENST00000561330 LINC01545Q5VT33 79 aa-0.57□□□□□ -2.5
USP8-218ENST00000561330 C10orf82Q8WW14 230 aa-0.57□□□□□ -2.5
USP8-218ENST00000561330 C10orf71Q711Q0 1435 aa-0.57□□□□□ -2.5
USP8-218ENST00000561330 ATRQ13535 2644 aa-0.57□□□□□ -2.5
USP8-218ENST00000561330 ERCC6L2Q5T890 1561 aa-0.57□□□□□ -2.5
USP8-218ENST00000561330 PCLOQ9Y6V0 5065 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 TRAV36DV7A0A075B6V5 113 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 M0R129 80 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 TNFSF15O95150 251 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 IFNA17P01571 189 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 FABP1P07148 127 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 PIRTP0C851 137 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 NCS1P62166 190 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 C9orf116Q5BN46 136 aaPredicted RBP-0.58□□□□□ -2.5
USP8-218ENST00000561330 SPAG11AQ6PDA7 123 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 CTAGE3PQ8IX95 158 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 HIGD1AQ9Y241 93 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 SETXQ7Z333 2677 aaKnown RBP-0.58□□□□□ -2.5
USP8-218ENST00000561330 HERC1Q15751 4861 aa-0.58□□□□□ -2.5
USP8-218ENST00000561330 KMT2CQ8NEZ4 4911 aaKnown RBP-0.59□□□□□ -2.5
USP8-218ENST00000561330 BCL9LQ86UU0 1499 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 CREBBPQ92793 2442 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 TSTD3H0UI37 97 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 UBE2G1P62253 170 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 RPS28P62857 69 aaKnown RBP-0.59□□□□□ -2.5
USP8-218ENST00000561330 TFAMQ00059 246 aaKnown RBP-0.59□□□□□ -2.5
USP8-218ENST00000561330 MIC13Q5XKP0 118 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 SPTSSBQ8NFR3 76 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 VSTM2AQ8TAG5 236 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 FXYD6Q9H0Q3 95 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 TP53AIP1Q9HCN2 124 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 SYNJ1O43426 1573 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 NWD2Q9ULI1 1742 aa-0.59□□□□□ -2.5
USP8-218ENST00000561330 NF1P21359 2839 aa-0.6□□□□□ -2.5
USP8-218ENST00000561330 PRDM2Q13029 1718 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 UBE2D1P51668 147 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 KRTAP19-8Q3LI54 63 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 KRTAP20-2Q3LI61 65 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 S100A7L2Q5SY68 101 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 Q5VV11 94 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 CENPHQ9H3R5 247 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms