RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 NEGR1Q7Z3B1 354 aa8.61□□□□□ -1.03
GABPB1-208ENST00000558970 RPL39LQ96EH5 51 aaKnown RBP8.61□□□□□ -1.03
GABPB1-208ENST00000558970 BTF3L4Q96K17 158 aa8.61□□□□□ -1.03
GABPB1-208ENST00000558970 H7C1H1 209 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 M0QY20 66 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 GAS8-AS1O95177 125 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 RAB4AP20338 218 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 RPL36AP83881 106 aaKnown RBP8.6□□□□□ -1.03
GABPB1-208ENST00000558970 ESRGQ1W209 222 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 ATP5L2Q7Z4Y8 100 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 GATD1Q8NB37 220 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 LINC00476Q8WZB0 136 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 RPL36ALQ969Q0 106 aaKnown RBP8.6□□□□□ -1.03
GABPB1-208ENST00000558970 RNF185Q96GF1 192 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 IMMP2LQ96T52 175 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 TMEM242Q9NWH2 141 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 ALMS1Q8TCU4 4167 aa8.6□□□□□ -1.03
GABPB1-208ENST00000558970 A0A1B0GW15 77 aa8.59□□□□□ -1.03
GABPB1-208ENST00000558970 S100A8P05109 93 aa8.59□□□□□ -1.03
GABPB1-208ENST00000558970 CCL18P55774 89 aa8.59□□□□□ -1.03
GABPB1-208ENST00000558970 MRPL51Q4U2R6 128 aaKnown RBP8.59□□□□□ -1.03
GABPB1-208ENST00000558970 RASL11AQ6T310 242 aa8.59□□□□□ -1.03
GABPB1-208ENST00000558970 CBLN2Q8IUK8 224 aa8.59□□□□□ -1.03
GABPB1-208ENST00000558970 ATP6V0E2Q8NHE4 81 aa8.59□□□□□ -1.03
GABPB1-208ENST00000558970 LINC00588Q9Y4M8 146 aa8.59□□□□□ -1.03
GABPB1-208ENST00000558970 TNFRSF18Q9Y5U5 241 aa8.59□□□□□ -1.03
GABPB1-208ENST00000558970 TRBV7-3A0A075B6L6 115 aa8.58□□□□□ -1.04
GABPB1-208ENST00000558970 TGIF2-C20orf24A0A0A6YYL0 155 aa8.58□□□□□ -1.04
GABPB1-208ENST00000558970 TRBV10-1A0A0K0K1A3 114 aa8.58□□□□□ -1.04
GABPB1-208ENST00000558970 FAM104BQ5XKR9 115 aa8.58□□□□□ -1.04
GABPB1-208ENST00000558970 LYPD5Q6UWN5 251 aa8.58□□□□□ -1.04
GABPB1-208ENST00000558970 LINC00694P0DN24 101 aa8.57□□□□□ -1.04
GABPB1-208ENST00000558970 RPS10P46783 165 aaKnown RBP8.57□□□□□ -1.04
GABPB1-208ENST00000558970 UBE2D3P61077 147 aa8.57□□□□□ -1.04
GABPB1-208ENST00000558970 UBE2D2P62837 147 aa8.57□□□□□ -1.04
GABPB1-208ENST00000558970 OR10J3Q5JRS4 329 aa8.57□□□□□ -1.04
GABPB1-208ENST00000558970 LGALS9CQ6DKI2 356 aa8.57□□□□□ -1.04
GABPB1-208ENST00000558970 NIT2Q9NQR4 276 aa8.57□□□□□ -1.04
GABPB1-208ENST00000558970 VPS13DQ5THJ4 4388 aa8.56□□□□□ -1.04
GABPB1-208ENST00000558970 IGLV2-18A0A075B6J9 118 aa8.56□□□□□ -1.04
GABPB1-208ENST00000558970 D6R8Y8 96 aa8.56□□□□□ -1.04
GABPB1-208ENST00000558970 SCO1O75880 301 aa8.56□□□□□ -1.04
GABPB1-208ENST00000558970 CKS2P33552 79 aa8.56□□□□□ -1.04
GABPB1-208ENST00000558970 ELOBQ15370 118 aa8.56□□□□□ -1.04
GABPB1-208ENST00000558970 MRAP2Q96G30 205 aa8.56□□□□□ -1.04
GABPB1-208ENST00000558970 TRAV9-1A0A075B6T8 112 aa8.55□□□□□ -1.04
GABPB1-208ENST00000558970 TMEM136Q6ZRR5 245 aa8.55□□□□□ -1.04
GABPB1-208ENST00000558970 SH2D6Q7Z4S9 175 aa8.55□□□□□ -1.04
GABPB1-208ENST00000558970 GTSF1LQ9H1H1 148 aa8.55□□□□□ -1.04
GABPB1-208ENST00000558970 HYDINQ4G0P3 5121 aa8.55□□□□□ -1.04
GABPB1-208ENST00000558970 M0R2N4 97 aa8.54□□□□□ -1.04
GABPB1-208ENST00000558970 KIAA1644Q3SXP7 199 aa8.54□□□□□ -1.04
GABPB1-208ENST00000558970 WFDC10BQ8IUB3 73 aa8.54□□□□□ -1.04
GABPB1-208ENST00000558970 FRZBQ92765 325 aa8.54□□□□□ -1.04
GABPB1-208ENST00000558970 DNAJC30Q96LL9 226 aa8.54□□□□□ -1.04
GABPB1-208ENST00000558970 MRPS16Q9Y3D3 137 aaKnown RBP8.54□□□□□ -1.04
GABPB1-208ENST00000558970 SDHAF1A6NFY7 115 aa8.53□□□□□ -1.04
GABPB1-208ENST00000558970 NPYP01303 97 aa8.53□□□□□ -1.04
GABPB1-208ENST00000558970 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-208ENST00000558970 ST20Q9HBF5 79 aa8.53□□□□□ -1.04
GABPB1-208ENST00000558970 SMCO4Q9NRQ5 59 aa8.53□□□□□ -1.04
GABPB1-208ENST00000558970 APCSP02743 223 aa8.52□□□□□ -1.05
GABPB1-208ENST00000558970 NRACQ8N912 160 aa8.52□□□□□ -1.05
GABPB1-208ENST00000558970 PRELID3AQ96N28 172 aa8.52□□□□□ -1.05
GABPB1-208ENST00000558970 TRAV8-6A0A0B4J262 113 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 TNFRSF6BO95407 300 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 IGHV3-30P01768 117 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 IGHV3-33P01772 117 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 HLA-DQA1P01909 254 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 IGHV3-30-3P0DP02 117 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 IGHV3-30-5P0DP03 117 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 PMCHP20382 165 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 LELP1Q5T871 98 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 DAZ4Q86SG3 579 aaKnown RBP8.51□□□□□ -1.05
GABPB1-208ENST00000558970 ORMDL3Q8N138 153 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 Q8N3U1 123 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 MRPL18Q9H0U6 180 aaKnown RBP8.51□□□□□ -1.05
GABPB1-208ENST00000558970 Q9H8V8 135 aa8.51□□□□□ -1.05
GABPB1-208ENST00000558970 DAZ3Q9NR90 486 aaKnown RBP8.51□□□□□ -1.05
GABPB1-208ENST00000558970 TRBV24-1A0A075B6N3 115 aa8.5□□□□□ -1.05
GABPB1-208ENST00000558970 LOC389332A0A1B0GUA5 103 aa8.5□□□□□ -1.05
GABPB1-208ENST00000558970 SIVA1O15304 175 aa8.5□□□□□ -1.05
GABPB1-208ENST00000558970 SUMO2P61956 95 aaKnown RBP8.5□□□□□ -1.05
GABPB1-208ENST00000558970 FABP9Q0Z7S8 132 aa8.5□□□□□ -1.05
GABPB1-208ENST00000558970 COTL1Q14019 142 aa8.5□□□□□ -1.05
GABPB1-208ENST00000558970 NTM-AS1Q6ZSK4 140 aa8.5□□□□□ -1.05
GABPB1-208ENST00000558970 CHCHD5Q9BSY4 110 aa8.5□□□□□ -1.05
GABPB1-208ENST00000558970 GNB1LQ9BYB4 327 aa8.5□□□□□ -1.05
GABPB1-208ENST00000558970 TRAPPC1Q9Y5R8 145 aa8.5□□□□□ -1.05
GABPB1-208ENST00000558970 TRBV6-8A0A0A6YYG3 113 aa8.49□□□□□ -1.05
GABPB1-208ENST00000558970 YPEL4Q96NS1 127 aa8.49□□□□□ -1.05
GABPB1-208ENST00000558970 TMEM70Q9BUB7 260 aa8.49□□□□□ -1.05
GABPB1-208ENST00000558970 TRBV25-1A0A075B6N4 114 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 TRBV6-5A0A0K0K1A5 114 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 TMEM262E9PQX1 116 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 I3L3M4 83 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 PPP1R17O96001 155 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 PPBPP02775 128 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 MT-ND6P03923 174 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 AMTP48728 403 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms