RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 LINC01549A6NIU2 74 aa9.94□□□□□ -0.82
TPM1-215ENST00000558868 UFSP1Q6NVU6 142 aa9.94□□□□□ -0.82
TPM1-215ENST00000558868 PET117Q6UWS5 81 aa9.94□□□□□ -0.82
TPM1-215ENST00000558868 OVOL2Q9BRP0 275 aa9.94□□□□□ -0.82
TPM1-215ENST00000558868 TENM1Q9UKZ4 2725 aa9.93□□□□□ -0.82
TPM1-215ENST00000558868 SYS1-DBNDD2H3BUS1 97 aa9.93□□□□□ -0.82
TPM1-215ENST00000558868 POLR2KP53803 58 aaKnown RBP9.93□□□□□ -0.82
TPM1-215ENST00000558868 OR4C5Q8NGB2 326 aa9.93□□□□□ -0.82
TPM1-215ENST00000558868 DNAJC30Q96LL9 226 aa9.93□□□□□ -0.82
TPM1-215ENST00000558868 KIR2DL4Q99706 377 aa9.93□□□□□ -0.82
TPM1-215ENST00000558868 A0A096LNJ9 63 aa9.92□□□□□ -0.82
TPM1-215ENST00000558868 TRAV4A0A0B4J268 109 aa9.92□□□□□ -0.82
TPM1-215ENST00000558868 SDHAF1A6NFY7 115 aa9.92□□□□□ -0.82
TPM1-215ENST00000558868 ATP5LO75964 103 aa9.92□□□□□ -0.82
TPM1-215ENST00000558868 NUDT3O95989 172 aa9.92□□□□□ -0.82
TPM1-215ENST00000558868 EGFEM1PQ0D2K5 195 aa9.92□□□□□ -0.82
TPM1-215ENST00000558868 SPATA12Q7Z6I5 190 aa9.92□□□□□ -0.82
TPM1-215ENST00000558868 NOP10Q9NPE3 64 aaKnown RBP9.92□□□□□ -0.82
TPM1-215ENST00000558868 TRBV27A0A0K0K1C4 114 aa9.91□□□□□ -0.82
TPM1-215ENST00000558868 IGHV3-53P01767 116 aa9.91□□□□□ -0.82
TPM1-215ENST00000558868 OXLD1Q5BKU9 147 aa9.91□□□□□ -0.82
TPM1-215ENST00000558868 TEX43Q6ZNM6 134 aa9.91□□□□□ -0.82
TPM1-215ENST00000558868 TNFRSF18Q9Y5U5 241 aa9.91□□□□□ -0.82
TPM1-215ENST00000558868 IGHV3-73A0A0B4J1V6 119 aa9.9□□□□□ -0.82
TPM1-215ENST00000558868 PLAC8L1A1L4L8 177 aa9.9□□□□□ -0.82
TPM1-215ENST00000558868 IGHV4-30-4P0DP06 118 aa9.9□□□□□ -0.82
TPM1-215ENST00000558868 CDPF1Q6NVV7 123 aa9.9□□□□□ -0.82
TPM1-215ENST00000558868 Q6ZTI0 123 aa9.9□□□□□ -0.82
TPM1-215ENST00000558868 LINC00173Q6ZV60 143 aa9.9□□□□□ -0.82
TPM1-215ENST00000558868 Q8N976 141 aa9.9□□□□□ -0.82
TPM1-215ENST00000558868 IFI27L1Q96BM0 104 aa9.9□□□□□ -0.82
TPM1-215ENST00000558868 A8MZ25 164 aa9.89□□□□□ -0.83
TPM1-215ENST00000558868 I3L3M4 83 aa9.89□□□□□ -0.83
TPM1-215ENST00000558868 RHOHQ15669 191 aa9.89□□□□□ -0.83
TPM1-215ENST00000558868 VAMP8Q9BV40 100 aa9.89□□□□□ -0.83
TPM1-215ENST00000558868 KMT2CQ8NEZ4 4911 aaKnown RBP9.89□□□□□ -0.83
TPM1-215ENST00000558868 TRGV2A0A075B6R0 118 aa9.88□□□□□ -0.83
TPM1-215ENST00000558868 TSTD3H0UI37 97 aa9.88□□□□□ -0.83
TPM1-215ENST00000558868 PKIAP61925 76 aa9.88□□□□□ -0.83
TPM1-215ENST00000558868 TOMM6Q96B49 74 aa9.88□□□□□ -0.83
TPM1-215ENST00000558868 X6R8D5 127 aa9.88□□□□□ -0.83
TPM1-215ENST00000558868 NOTCH3Q9UM47 2321 aa9.87□□□□□ -0.83
TPM1-215ENST00000558868 TRBV10-1A0A0K0K1A3 114 aa9.87□□□□□ -0.83
TPM1-215ENST00000558868 GAGE12BA1L429 117 aa9.87□□□□□ -0.83
TPM1-215ENST00000558868 GAGE7O76087 117 aa9.87□□□□□ -0.83
TPM1-215ENST00000558868 GAGE12FP0CL80 117 aa9.87□□□□□ -0.83
TPM1-215ENST00000558868 GAGE12GP0CL81 117 aa9.87□□□□□ -0.83
TPM1-215ENST00000558868 GAGE12IP0CL82 117 aa9.87□□□□□ -0.83
TPM1-215ENST00000558868 LINC01545Q5VT33 79 aa9.87□□□□□ -0.83
TPM1-215ENST00000558868 LGALS9CQ6DKI2 356 aa9.87□□□□□ -0.83
TPM1-215ENST00000558868 CYSLTR1Q9Y271 337 aa9.87□□□□□ -0.83
TPM1-215ENST00000558868 PCP4L1A6NKN8 68 aa9.86□□□□□ -0.83
TPM1-215ENST00000558868 LYRM9A8MSI8 78 aa9.86□□□□□ -0.83
TPM1-215ENST00000558868 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.86□□□□□ -0.83
TPM1-215ENST00000558868 MIFP14174 115 aa9.86□□□□□ -0.83
TPM1-215ENST00000558868 KRTAP10-11P60412 298 aa9.86□□□□□ -0.83
TPM1-215ENST00000558868 DEFB135Q30KP9 77 aa9.86□□□□□ -0.83
TPM1-215ENST00000558868 C2orf66Q6UXQ4 117 aa9.86□□□□□ -0.83
TPM1-215ENST00000558868 RNF183Q96D59 192 aa9.86□□□□□ -0.83
TPM1-215ENST00000558868 ZNF479Q96JC4 524 aa9.86□□□□□ -0.83
TPM1-215ENST00000558868 C18orf15Q96N68 181 aa9.86□□□□□ -0.83
TPM1-215ENST00000558868 SCGB3A1Q96QR1 104 aa9.86□□□□□ -0.83
TPM1-215ENST00000558868 VWFP04275 2813 aa9.85□□□□□ -0.83
TPM1-215ENST00000558868 H0Y8G0 127 aa9.85□□□□□ -0.83
TPM1-215ENST00000558868 K7EQD1 137 aa9.85□□□□□ -0.83
TPM1-215ENST00000558868 PRSS1P07477 247 aa9.85□□□□□ -0.83
TPM1-215ENST00000558868 EMP1P54849 157 aa9.85□□□□□ -0.83
TPM1-215ENST00000558868 Q6ZSN1 163 aa9.85□□□□□ -0.83
TPM1-215ENST00000558868 NEGR1Q7Z3B1 354 aa9.85□□□□□ -0.83
TPM1-215ENST00000558868 LINC00612Q8N6U2 182 aa9.85□□□□□ -0.83
TPM1-215ENST00000558868 NEXN-AS1Q8NBZ9 246 aa9.85□□□□□ -0.83
TPM1-215ENST00000558868 OR11H2Q8NH07 326 aa9.85□□□□□ -0.83
TPM1-215ENST00000558868 TRAV9-2A0A087WT02 112 aa9.84□□□□□ -0.83
TPM1-215ENST00000558868 HSBP1L1C9JCN9 74 aa9.84□□□□□ -0.83
TPM1-215ENST00000558868 RPL36AP83881 106 aaKnown RBP9.84□□□□□ -0.83
TPM1-215ENST00000558868 Q6ZN92 141 aa9.84□□□□□ -0.83
TPM1-215ENST00000558868 ERASQ7Z444 233 aa9.84□□□□□ -0.83
TPM1-215ENST00000558868 ZNF664Q8N3J9 261 aa9.84□□□□□ -0.83
TPM1-215ENST00000558868 RPL36ALQ969Q0 106 aaKnown RBP9.84□□□□□ -0.83
TPM1-215ENST00000558868 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
TPM1-215ENST00000558868 TRGV4A0A0C4DH28 118 aa9.83□□□□□ -0.84
TPM1-215ENST00000558868 TRBV6-4A0A1B0GX49 114 aa9.83□□□□□ -0.84
TPM1-215ENST00000558868 TSHBP01222 138 aa9.83□□□□□ -0.84
TPM1-215ENST00000558868 P0DMU3 169 aa9.83□□□□□ -0.84
TPM1-215ENST00000558868 FAM231AP0DMU4 169 aa9.83□□□□□ -0.84
TPM1-215ENST00000558868 FAM231CP0DMU5 169 aa9.83□□□□□ -0.84
TPM1-215ENST00000558868 SAMD5Q5TGI4 173 aa9.83□□□□□ -0.84
TPM1-215ENST00000558868 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
TPM1-215ENST00000558868 TP53TG1Q9Y2A0 90 aa9.83□□□□□ -0.84
TPM1-215ENST00000558868 TRBV7-3A0A075B6L6 115 aa9.82□□□□□ -0.84
TPM1-215ENST00000558868 PRADC1Q9BSG0 188 aa9.82□□□□□ -0.84
TPM1-215ENST00000558868 PAM16Q9Y3D7 125 aa9.82□□□□□ -0.84
TPM1-215ENST00000558868 TRAV12-1A0A0B4J245 112 aa9.81□□□□□ -0.84
TPM1-215ENST00000558868 IGHV4-28A0A0C4DH34 117 aa9.81□□□□□ -0.84
TPM1-215ENST00000558868 TEX48A0A1B0GUV7 120 aa9.81□□□□□ -0.84
TPM1-215ENST00000558868 G3V4G9 280 aa9.81□□□□□ -0.84
TPM1-215ENST00000558868 COTL1Q14019 142 aa9.81□□□□□ -0.84
TPM1-215ENST00000558868 SPATA45Q537H7 98 aa9.81□□□□□ -0.84
TPM1-215ENST00000558868 DAZ4Q86SG3 579 aaKnown RBP9.81□□□□□ -0.84
TPM1-215ENST00000558868 TIMM17AQ99595 171 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms