RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 Q5PR19 223 aa16.65■□□□□ 0.26
RCCD1-208ENST00000557266 TRPT1Q86TN4 253 aaKnown RBP16.64■□□□□ 0.25
RCCD1-208ENST00000557266 TRGV11A0A075B6L2 103 aa16.63■□□□□ 0.25
RCCD1-208ENST00000557266 PAPPA-AS1Q5QFB9 102 aa16.63■□□□□ 0.25
RCCD1-208ENST00000557266 PLEKHB2Q96CS7 222 aa16.63■□□□□ 0.25
RCCD1-208ENST00000557266 A0A1B0GWB2 263 aa16.63■□□□□ 0.25
RCCD1-208ENST00000557266 NSUN5P1Q3KNT7 163 aa16.63■□□□□ 0.25
RCCD1-208ENST00000557266 Q8N2B8 174 aa16.63■□□□□ 0.25
RCCD1-208ENST00000557266 C21orf62-AS1Q17RA5 79 aa16.62■□□□□ 0.25
RCCD1-208ENST00000557266 KLHL30-AS1Q8NEE0 82 aa16.62■□□□□ 0.25
RCCD1-208ENST00000557266 VPS25Q9BRG1 176 aa16.62■□□□□ 0.25
RCCD1-208ENST00000557266 DEFB131AP59861 70 aa16.61■□□□□ 0.25
RCCD1-208ENST00000557266 SCGB2A2Q13296 93 aa16.61■□□□□ 0.25
RCCD1-208ENST00000557266 RHOHQ15669 191 aa16.61■□□□□ 0.25
RCCD1-208ENST00000557266 KRTAP1-3Q8IUG1 177 aa16.61■□□□□ 0.25
RCCD1-208ENST00000557266 ZNRF2Q8NHG8 242 aa16.61■□□□□ 0.25
RCCD1-208ENST00000557266 ZNF479Q96JC4 524 aa16.61■□□□□ 0.25
RCCD1-208ENST00000557266 TEX15Q9BXT5 2789 aa16.6■□□□□ 0.25
RCCD1-208ENST00000557266 P0DMU3 169 aa16.6■□□□□ 0.25
RCCD1-208ENST00000557266 FAM231AP0DMU4 169 aa16.6■□□□□ 0.25
RCCD1-208ENST00000557266 FAM231CP0DMU5 169 aa16.6■□□□□ 0.25
RCCD1-208ENST00000557266 PRRC2AP48634 2157 aaKnown RBP16.6■□□□□ 0.25
RCCD1-208ENST00000557266 HERVK_113P61574 105 aa16.6■□□□□ 0.25
RCCD1-208ENST00000557266 RBMY1BA6NDE4 496 aaKnown RBP16.59■□□□□ 0.25
RCCD1-208ENST00000557266 RBMY1EA6NEQ0 496 aaKnown RBP16.59■□□□□ 0.25
RCCD1-208ENST00000557266 A8MTW9 85 aa16.59■□□□□ 0.25
RCCD1-208ENST00000557266 RBMY1DP0C7P1 496 aaKnown RBP16.59■□□□□ 0.25
RCCD1-208ENST00000557266 SCGB1D4Q6XE38 83 aa16.59■□□□□ 0.25
RCCD1-208ENST00000557266 DUX3Q96PT4 197 aa16.59■□□□□ 0.25
RCCD1-208ENST00000557266 H3BMM0 161 aa16.58■□□□□ 0.25
RCCD1-208ENST00000557266 OPRPNQ99935 248 aaPredicted RBP16.58■□□□□ 0.25
RCCD1-208ENST00000557266 HTN1P15515 57 aa16.58■□□□□ 0.24
RCCD1-208ENST00000557266 Q96MF0 132 aa16.58■□□□□ 0.24
RCCD1-208ENST00000557266 FASNP49327 2511 aaKnown RBP16.58■□□□□ 0.24
RCCD1-208ENST00000557266 UNC79Q9P2D8 2635 aa16.57■□□□□ 0.24
RCCD1-208ENST00000557266 TSPEAR-AS2P59090 65 aa16.57■□□□□ 0.24
RCCD1-208ENST00000557266 RRN3P1Q2M238 152 aa16.57■□□□□ 0.24
RCCD1-208ENST00000557266 TMEM61Q8N0U2 210 aa16.57■□□□□ 0.24
RCCD1-208ENST00000557266 I3L3M4 83 aa16.57■□□□□ 0.24
RCCD1-208ENST00000557266 TMEM170BQ5T4T1 132 aa16.57■□□□□ 0.24
RCCD1-208ENST00000557266 PDZD2O15018 2839 aa16.56■□□□□ 0.24
RCCD1-208ENST00000557266 MYO9AB2RTY4 2548 aa16.56■□□□□ 0.24
RCCD1-208ENST00000557266 C20orf203Q8NBC4 194 aa16.56■□□□□ 0.24
RCCD1-208ENST00000557266 AKAP9Q99996 3911 aa16.56■□□□□ 0.24
RCCD1-208ENST00000557266 C4orf3Q8WVX3 66 aa16.55■□□□□ 0.24
RCCD1-208ENST00000557266 ZNF469Q96JG9 3925 aaPredicted RBP16.55■□□□□ 0.24
RCCD1-208ENST00000557266 ITPR2Q14571 2701 aa16.55■□□□□ 0.24
RCCD1-208ENST00000557266 PRM2P04554 102 aa16.55■□□□□ 0.24
RCCD1-208ENST00000557266 TRAV2A0A0B4J234 112 aa16.54■□□□□ 0.24
RCCD1-208ENST00000557266 G3V4G9 280 aa16.54■□□□□ 0.24
RCCD1-208ENST00000557266 PEMTQ9UBM1 199 aa16.54■□□□□ 0.24
RCCD1-208ENST00000557266 IGHV3-73A0A0B4J1V6 119 aa16.54■□□□□ 0.24
RCCD1-208ENST00000557266 A0A0J9YY99 117 aa16.54■□□□□ 0.24
RCCD1-208ENST00000557266 HIST2H2BDQ6DRA6 164 aa16.54■□□□□ 0.24
RCCD1-208ENST00000557266 NFE4Q86UQ8 179 aa16.54■□□□□ 0.24
RCCD1-208ENST00000557266 EDA2RQ9HAV5 297 aa16.54■□□□□ 0.24
RCCD1-208ENST00000557266 SRSF9Q13242 221 aaKnown RBP eCLIP16.53■□□□□ 0.24
RCCD1-208ENST00000557266 DLX4Q92988 240 aaPredicted RBP16.53■□□□□ 0.24
RCCD1-208ENST00000557266 PROK1P58294 105 aa16.52■□□□□ 0.24
RCCD1-208ENST00000557266 KHDC1LQ5JSQ8 128 aa16.52■□□□□ 0.24
RCCD1-208ENST00000557266 SPAG8Q99932 426 aaPredicted RBP16.52■□□□□ 0.24
RCCD1-208ENST00000557266 AMELXQ99217 191 aa16.52■□□□□ 0.23
RCCD1-208ENST00000557266 UBE2D1P51668 147 aa16.51■□□□□ 0.23
RCCD1-208ENST00000557266 TMEM238LA0A1B0GVL6 79 aa16.51■□□□□ 0.23
RCCD1-208ENST00000557266 A6NJY4 79 aa16.51■□□□□ 0.23
RCCD1-208ENST00000557266 MAP6D1Q9H9H5 199 aa16.51■□□□□ 0.23
RCCD1-208ENST00000557266 IGLV4-3A0A075B6K6 122 aa16.5■□□□□ 0.23
RCCD1-208ENST00000557266 H3BMG7 143 aa16.5■□□□□ 0.23
RCCD1-208ENST00000557266 WFDC11Q8NEX6 87 aa16.49■□□□□ 0.23
RCCD1-208ENST00000557266 ITPR3Q14573 2671 aa16.49■□□□□ 0.23
RCCD1-208ENST00000557266 J3QQQ9 107 aa16.49■□□□□ 0.23
RCCD1-208ENST00000557266 M0R2P5 195 aa16.49■□□□□ 0.23
RCCD1-208ENST00000557266 DYNLRB2Q8TF09 96 aa16.49■□□□□ 0.23
RCCD1-208ENST00000557266 PGPEP1Q9NXJ5 209 aa16.49■□□□□ 0.23
RCCD1-208ENST00000557266 CCDC168Q8NDH2 2452 aa16.49■□□□□ 0.23
RCCD1-208ENST00000557266 TMEM223A0PJW6 202 aa16.48■□□□□ 0.23
RCCD1-208ENST00000557266 DEFB114Q30KQ6 69 aa16.48■□□□□ 0.23
RCCD1-208ENST00000557266 HECTD1Q9ULT8 2610 aa16.47■□□□□ 0.23
RCCD1-208ENST00000557266 A8MWV9 139 aa16.47■□□□□ 0.23
RCCD1-208ENST00000557266 ZNF22P17026 224 aaPredicted RBP16.47■□□□□ 0.23
RCCD1-208ENST00000557266 RPL24P83731 157 aaKnown RBP16.47■□□□□ 0.23
RCCD1-208ENST00000557266 SPANXB1Q9NS25 103 aaPredicted RBP16.47■□□□□ 0.23
RCCD1-208ENST00000557266 TLN2Q9Y4G6 2542 aa16.47■□□□□ 0.23
RCCD1-208ENST00000557266 TEX48A0A1B0GUV7 120 aa16.46■□□□□ 0.23
RCCD1-208ENST00000557266 F8W1H4 67 aa16.46■□□□□ 0.23
RCCD1-208ENST00000557266 ZNF415Q09FC8 603 aa16.46■□□□□ 0.23
RCCD1-208ENST00000557266 WFDC2Q14508 124 aa16.46■□□□□ 0.23
RCCD1-208ENST00000557266 Q6ZSN1 163 aa16.46■□□□□ 0.23
RCCD1-208ENST00000557266 SLC25A29Q8N8R3 303 aa16.46■□□□□ 0.23
RCCD1-208ENST00000557266 MRPL16Q9NX20 251 aaKnown RBP16.46■□□□□ 0.23
RCCD1-208ENST00000557266 Q9UF83 564 aa16.46■□□□□ 0.23
RCCD1-208ENST00000557266 FAM104AQ969W3 186 aa16.46■□□□□ 0.23
RCCD1-208ENST00000557266 VCX2Q9H322 139 aa16.46■□□□□ 0.23
RCCD1-208ENST00000557266 IGHV3-30P01768 117 aa16.45■□□□□ 0.22
RCCD1-208ENST00000557266 IGHV3-30-5P0DP03 117 aa16.45■□□□□ 0.22
RCCD1-208ENST00000557266 LGALS3P17931 250 aaKnown RBP16.45■□□□□ 0.22
RCCD1-208ENST00000557266 PIK3CD-AS1Q5SR53 167 aa16.45■□□□□ 0.22
RCCD1-208ENST00000557266 A0A0J9YXV3 536 aa16.45■□□□□ 0.22
RCCD1-208ENST00000557266 RHODO00212 210 aa16.45■□□□□ 0.22
RCCD1-208ENST00000557266 CD28P10747 220 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms