RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 TOMM6Q96B49 74 aa8.9□□□□□ -0.98
XRCC3-208ENST00000554811 ZNF625Q96I27 306 aaPredicted RBP8.9□□□□□ -0.98
XRCC3-208ENST00000554811 VCX2Q9H322 139 aa8.9□□□□□ -0.98
XRCC3-208ENST00000554811 IGHV3-53P01767 116 aa8.9□□□□□ -0.98
XRCC3-208ENST00000554811 DGAT2L7PQ6IED9 249 aa8.9□□□□□ -0.98
XRCC3-208ENST00000554811 SIGMAR1Q99720 223 aa8.9□□□□□ -0.98
XRCC3-208ENST00000554811 CD28P10747 220 aa8.9□□□□□ -0.99
XRCC3-208ENST00000554811 A0A0J9YXV3 536 aa8.89□□□□□ -0.99
XRCC3-208ENST00000554811 PMVKQ15126 192 aa8.89□□□□□ -0.99
XRCC3-208ENST00000554811 NEXN-AS1Q8NBZ9 246 aa8.89□□□□□ -0.99
XRCC3-208ENST00000554811 HIGD1BQ9P298 99 aa8.89□□□□□ -0.99
XRCC3-208ENST00000554811 DYNLRB2Q8TF09 96 aa8.89□□□□□ -0.99
XRCC3-208ENST00000554811 MRPL53Q96EL3 112 aaKnown RBP8.89□□□□□ -0.99
XRCC3-208ENST00000554811 UBE2E2Q96LR5 201 aa8.89□□□□□ -0.99
XRCC3-208ENST00000554811 C20orf78Q9BR46 151 aa8.89□□□□□ -0.99
XRCC3-208ENST00000554811 GAGE12HA6NDE8 117 aa8.88□□□□□ -0.99
XRCC3-208ENST00000554811 IGHG2P01859 326 aa8.88□□□□□ -0.99
XRCC3-208ENST00000554811 COX8CQ7Z4L0 72 aa8.88□□□□□ -0.99
XRCC3-208ENST00000554811 ZNF580Q9UK33 172 aa8.88□□□□□ -0.99
XRCC3-208ENST00000554811 SLURP1P55000 103 aa8.88□□□□□ -0.99
XRCC3-208ENST00000554811 C10orf105Q8TEF2 133 aa8.88□□□□□ -0.99
XRCC3-208ENST00000554811 SPAG8Q99932 426 aaPredicted RBP8.88□□□□□ -0.99
XRCC3-208ENST00000554811 GEMIN7Q9H840 131 aaKnown RBP8.88□□□□□ -0.99
XRCC3-208ENST00000554811 B4DSR2 109 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 COX6B1P14854 86 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 ZMAT4Q9H898 229 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 TNFRSF18Q9Y5U5 241 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 SRSF2Q01130 221 aaKnown RBP8.87□□□□□ -0.99
XRCC3-208ENST00000554811 APRG1Q8IVJ8 170 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 LINC01587Q99440 93 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 TM2D2Q9BX73 214 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 U3KQE9 123 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 FLNAP21333 2647 aaKnown RBP8.87□□□□□ -0.99
XRCC3-208ENST00000554811 A8MZ25 164 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 E9PLD3 99 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 TCTEX1D4Q5JR98 221 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 C18orf65Q6ZTR6 163 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 DLX4Q92988 240 aaPredicted RBP8.87□□□□□ -0.99
XRCC3-208ENST00000554811 MXRA5Q9NR99 2828 aa8.87□□□□□ -0.99
XRCC3-208ENST00000554811 IGHV4OR15-8A0A075B7B6 117 aa8.86□□□□□ -0.99
XRCC3-208ENST00000554811 A0A087WW49 117 aa8.86□□□□□ -0.99
XRCC3-208ENST00000554811 J3QQQ9 107 aa8.86□□□□□ -0.99
XRCC3-208ENST00000554811 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
XRCC3-208ENST00000554811 PPP1R17O96001 155 aa8.86□□□□□ -0.99
XRCC3-208ENST00000554811 DAND5Q8N907 189 aa8.86□□□□□ -0.99
XRCC3-208ENST00000554811 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.86□□□□□ -0.99
XRCC3-208ENST00000554811 TRAV8-3A0A0A6YYJ7 113 aa8.86□□□□□ -0.99
XRCC3-208ENST00000554811 IGKV2-29A2NJV5 120 aaPredicted RBP8.86□□□□□ -0.99
XRCC3-208ENST00000554811 A4D1N5 150 aa8.85□□□□□ -0.99
XRCC3-208ENST00000554811 A6NDX4 124 aa8.85□□□□□ -0.99
XRCC3-208ENST00000554811 C9JAW5 83 aa8.85□□□□□ -0.99
XRCC3-208ENST00000554811 HOXD3P31249 432 aaPredicted RBP8.85□□□□□ -0.99
XRCC3-208ENST00000554811 PSMG3-AS1Q96PY0 264 aa8.85□□□□□ -0.99
XRCC3-208ENST00000554811 XCL2Q9UBD3 114 aa8.85□□□□□ -0.99
XRCC3-208ENST00000554811 TSPEAR-AS2P59090 65 aa8.85□□□□□ -0.99
XRCC3-208ENST00000554811 B5MCH6 92 aa8.85□□□□□ -0.99
XRCC3-208ENST00000554811 LENEPQ9Y5L5 61 aa8.85□□□□□ -0.99
XRCC3-208ENST00000554811 F8W1H4 67 aa8.84□□□□□ -0.99
XRCC3-208ENST00000554811 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
XRCC3-208ENST00000554811 TSPAN13O95857 204 aa8.84□□□□□ -0.99
XRCC3-208ENST00000554811 TRBV7-3A0A075B6L6 115 aa8.84□□□□□ -0.99
XRCC3-208ENST00000554811 TRPT1Q86TN4 253 aaKnown RBP8.84□□□□□ -0.99
XRCC3-208ENST00000554811 ZNRF2Q8NHG8 242 aa8.84□□□□□ -0.99
XRCC3-208ENST00000554811 TRAV12-1A0A0B4J245 112 aa8.83□□□□□ -1
XRCC3-208ENST00000554811 Q9UF83 564 aa8.83□□□□□ -1
XRCC3-208ENST00000554811 NBEAL2Q6ZNJ1 2754 aa8.83□□□□□ -1
XRCC3-208ENST00000554811 SPINK8P0C7L1 97 aa8.83□□□□□ -1
XRCC3-208ENST00000554811 CFHR3Q02985 330 aa8.83□□□□□ -1
XRCC3-208ENST00000554811 YAE1D1Q9NRH1 226 aa8.83□□□□□ -1
XRCC3-208ENST00000554811 SOCS3O14543 225 aa8.82□□□□□ -1
XRCC3-208ENST00000554811 TSHBP01222 138 aa8.82□□□□□ -1
XRCC3-208ENST00000554811 MORN3Q6PF18 240 aaPredicted RBP8.82□□□□□ -1
XRCC3-208ENST00000554811 CRYGDP07320 174 aa8.82□□□□□ -1
XRCC3-208ENST00000554811 DCANP1Q8TF63 244 aa8.82□□□□□ -1
XRCC3-208ENST00000554811 USP24Q9UPU5 2620 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 ERG28Q9UKR5 140 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 NIPBLQ6KC79 2804 aaeCLIP8.81□□□□□ -1
XRCC3-208ENST00000554811 A0A0J9YX75 114 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 A8MWV9 139 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 TAL2Q16559 108 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 MUSTN1Q8IVN3 82 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 IGHV4-4A0A075B6R2 117 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 TRBV7-9A0A0J9YWB2 115 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 A0A0J9YY99 117 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 TCL1BO95988 128 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 PAPPA-AS1Q5QFB9 102 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 LYRM7Q5U5X0 104 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 TIMM21Q9BVV7 248 aa8.81□□□□□ -1
XRCC3-208ENST00000554811 ITPR3Q14573 2671 aa8.8□□□□□ -1
XRCC3-208ENST00000554811 TRAV13-1A0A0B4J241 112 aa8.8□□□□□ -1
XRCC3-208ENST00000554811 PRO1854Q9UHT4 67 aa8.8□□□□□ -1
XRCC3-208ENST00000554811 GCN1Q92616 2671 aaKnown RBP8.8□□□□□ -1
XRCC3-208ENST00000554811 HELZ2Q9BYK8 2649 aaKnown RBP8.8□□□□□ -1
XRCC3-208ENST00000554811 IGLV4-69A0A075B6H9 119 aa8.79□□□□□ -1
XRCC3-208ENST00000554811 I3L3M4 83 aa8.79□□□□□ -1
XRCC3-208ENST00000554811 GATA3P23771 443 aa8.79□□□□□ -1
XRCC3-208ENST00000554811 Q6ZSV7 163 aa8.79□□□□□ -1
XRCC3-208ENST00000554811 TRGV1A0A0A0MS02 117 aa8.79□□□□□ -1
XRCC3-208ENST00000554811 NDUFA11Q86Y39 141 aa8.79□□□□□ -1
XRCC3-208ENST00000554811 HIST2H2BCQ6DN03 193 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms