RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 NTF3P20783 257 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 RHOHQ15669 191 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 SMIM15Q7Z3B0 74 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 VSIG2Q96IQ7 327 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 PGLYRP4Q96LB8 373 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 PRADC1Q9BSG0 188 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 SAMD10Q9BYL1 202 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 CTDSP1Q9GZU7 261 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 JPT2Q9H910 190 aa5.29□□□□□ -1.56
ABCD4-220ENST00000553998 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
ABCD4-220ENST00000553998 A0A087WWL8 130 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 IGHV3-73A0A0B4J1V6 119 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 A0A0J9YY99 117 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 TRBV10-1A0A0K0K1A3 114 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 A0A1B0GW15 77 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 K7EQD1 137 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 RAB4BP61018 213 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 RIGQ13278 110 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 RHEBQ15382 184 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 TWIST1Q15672 202 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 MRPL23Q16540 153 aaKnown RBP5.28□□□□□ -1.56
ABCD4-220ENST00000553998 FAM74A4Q5TZK3 123 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 SH2D6Q7Z4S9 175 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 C14orf178Q8N769 122 aaPredicted RBP5.28□□□□□ -1.56
ABCD4-220ENST00000553998 SLC25A29Q8N8R3 303 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 NUP35Q8NFH5 326 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 IMMP2LQ96T52 175 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 DPH3P1Q9H4G8 78 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 TMEM242Q9NWH2 141 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 MSRB1Q9NZV6 116 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 ICOSQ9Y6W8 199 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 KIF25-AS1Q9Y6Z4 181 aa5.28□□□□□ -1.56
ABCD4-220ENST00000553998 A0A087WWC5 75 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 A0A096LPF7 62 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 S100A8P05109 93 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 GYPEP15421 78 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 EVI2AP22794 236 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 LINC00315P59091 139 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 SSTP61278 116 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 ESRGQ1W209 222 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 Q6ZSN1 163 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 ATP5L2Q7Z4Y8 100 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 SVBPQ8N300 66 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
ABCD4-220ENST00000553998 MRPS16Q9Y3D3 137 aaKnown RBP5.27□□□□□ -1.57
ABCD4-220ENST00000553998 C7orf77A4D0Y5 90 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 F5H697 171 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 H7C1H1 209 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 SNAPINO95295 136 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 APOC3P02656 99 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 SRIP30626 198 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 TIRAPP58753 221 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 KRTAP10-1P60331 282 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 ZNF56Q15929 161 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 NEGR1Q7Z3B1 354 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 CLRN3Q8NCR9 226 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 TMEM191AQ9H0A3 160 aa5.26□□□□□ -1.57
ABCD4-220ENST00000553998 TRAV9-1A0A075B6T8 112 aa5.25□□□□□ -1.57
ABCD4-220ENST00000553998 A0A1B0GXF2 115 aa5.25□□□□□ -1.57
ABCD4-220ENST00000553998 KRTAP29-1A8MX34 341 aaPredicted RBP5.25□□□□□ -1.57
ABCD4-220ENST00000553998 FAM229AH3BQW9 127 aa5.25□□□□□ -1.57
ABCD4-220ENST00000553998 J3QL48 77 aa5.25□□□□□ -1.57
ABCD4-220ENST00000553998 EREGO14944 169 aa5.25□□□□□ -1.57
ABCD4-220ENST00000553998 MGPP08493 103 aa5.25□□□□□ -1.57
ABCD4-220ENST00000553998 LINC00694P0DN24 101 aa5.25□□□□□ -1.57
ABCD4-220ENST00000553998 HBBP68871 147 aa5.25□□□□□ -1.57
ABCD4-220ENST00000553998 RPL36AP83881 106 aaKnown RBP5.25□□□□□ -1.57
ABCD4-220ENST00000553998 KCNIP4Q6PIL6 250 aa5.25□□□□□ -1.57
ABCD4-220ENST00000553998 RPL36ALQ969Q0 106 aaKnown RBP5.25□□□□□ -1.57
ABCD4-220ENST00000553998 BTF3L4Q96K17 158 aa5.25□□□□□ -1.57
ABCD4-220ENST00000553998 TRBV7-3A0A075B6L6 115 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 GAGE12JA6NER3 117 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 M0QY20 66 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 SMR3BP02814 79 aaPredicted RBP5.24□□□□□ -1.57
ABCD4-220ENST00000553998 S100PP25815 95 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 GAGE1Q13065 139 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 GAGE4Q13068 117 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 GAGE5Q13069 117 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 GAGE13Q4V321 117 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 SERTAD4-AS1Q5TG53 156 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 SUMO4Q6EEV6 95 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 RASL11AQ6T310 242 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 SLC7A5P1Q8MH63 180 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.24□□□□□ -1.57
ABCD4-220ENST00000553998 GATD1Q8NB37 220 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 ATP6V0E2Q8NHE4 81 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 DNAJC30Q96LL9 226 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 RPS10P5Q9NQ39 176 aa5.24□□□□□ -1.57
ABCD4-220ENST00000553998 A0A087WTM6 91 aa5.23□□□□□ -1.57
ABCD4-220ENST00000553998 LOC100131303A0A0U1RQF7 123 aa5.23□□□□□ -1.57
ABCD4-220ENST00000553998 FUSP35637 526 aaKnown RBP eCLIP5.23□□□□□ -1.57
ABCD4-220ENST00000553998 CAMPP49913 170 aa5.23□□□□□ -1.57
ABCD4-220ENST00000553998 UBE2D3P61077 147 aa5.23□□□□□ -1.57
ABCD4-220ENST00000553998 UBE2D2P62837 147 aa5.23□□□□□ -1.57
ABCD4-220ENST00000553998 FAM104BQ5XKR9 115 aa5.23□□□□□ -1.57
ABCD4-220ENST00000553998 MRPL54Q6P161 138 aaKnown RBP5.23□□□□□ -1.57
ABCD4-220ENST00000553998 LYPD5Q6UWN5 251 aa5.23□□□□□ -1.57
ABCD4-220ENST00000553998 NEXN-AS1Q8NBZ9 246 aa5.23□□□□□ -1.57
ABCD4-220ENST00000553998 MRAP2Q96G30 205 aa5.23□□□□□ -1.57
ABCD4-220ENST00000553998 GTSF1LQ9H1H1 148 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms