RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 FREM3P0C091 2139 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 TCTAP57738 103 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 PSG9Q00887 426 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 EMX2Q04743 252 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 DEFB109BQ30KR1 87 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 SLC48A1Q6P1K1 146 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 PHF5AQ7RTV0 110 aaKnown RBP1.17□□□□□ -2.22
SYNE2-210ENST00000553455 FDCSPQ8NFU4 85 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 MUCL1Q96DR8 90 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 HYLS1Q96M11 299 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 AMELYQ99218 206 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 RTL8AQ9BWD3 113 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 PROK2Q9HC23 129 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 TMEM14CQ9P0S9 112 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 CACNA1CQ13936 2221 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 MXRA5Q9NR99 2828 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 ABCA12Q86UK0 2595 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 FBN2P35556 2912 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 SPG11Q96JI7 2443 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 HIVEP1P15822 2718 aa1.17□□□□□ -2.22
SYNE2-210ENST00000553455 ITPR3Q14573 2671 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 HRNRQ86YZ3 2850 aaPredicted RBP1.16□□□□□ -2.22
SYNE2-210ENST00000553455 ABCA4P78363 2273 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 PKDREJQ9NTG1 2253 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 DOPEY2Q9Y3R5 2298 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 IGF2P01344 180 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 BTG2P78543 158 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 TFF3Q07654 80 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 KLRD1Q13241 179 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 TMEM14EPQ6UXP3 125 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 COMMD6Q7Z4G1 85 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 CTAGE3PQ8IX95 158 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 STX19Q8N4C7 294 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 BIN3Q9NQY0 253 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 OR52A1Q9UKL2 312 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 DNAJC15Q9Y5T4 150 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 POLQO75417 2590 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 SETD2Q9BYW2 2564 aaPredicted RBP1.16□□□□□ -2.22
SYNE2-210ENST00000553455 CREBBPQ92793 2442 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 DNAH3Q8TD57 4116 aa1.16□□□□□ -2.22
SYNE2-210ENST00000553455 MYO9AB2RTY4 2548 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 ANKHD1Q8IWZ3 2542 aaKnown RBP1.15□□□□□ -2.23
SYNE2-210ENST00000553455 NF1P21359 2839 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 ZANQ9Y493 2812 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 CELSR1Q9NYQ6 3014 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 RER1O15258 196 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 TSPAN19P0C672 248 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 NEFHP12036 1026 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 DEFB110Q30KQ9 67 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 C3orf33Q6P1S2 294 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 SCIMPQ6UWF3 145 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 SKA2Q8WVK7 121 aaPredicted RBP1.15□□□□□ -2.23
SYNE2-210ENST00000553455 TSLPQ969D9 159 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 PPP3R2Q96LZ3 170 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 CCDC115Q96NT0 180 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 SDF2Q99470 211 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 MTORP42345 2549 aa1.15□□□□□ -2.23
SYNE2-210ENST00000553455 TRRAPQ9Y4A5 3859 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 TRAV27A0A087WT01 109 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 F8W1H4 67 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 HMGN4O00479 90 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 HIST1H2BKO60814 126 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 HIST1H2BJP06899 126 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 IDO1P14902 403 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 S100A5P33763 92 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 RPS27LQ71UM5 84 aaKnown RBP1.14□□□□□ -2.23
SYNE2-210ENST00000553455 ARPINQ7Z6K5 226 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 ZC2HC1AQ96GY0 325 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 LRTM1Q9HBL6 345 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 CCDC168Q8NDH2 2452 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 MED12Q93074 2177 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 ANKRD17O75179 2603 aaKnown RBP1.14□□□□□ -2.23
SYNE2-210ENST00000553455 CUBNO60494 3623 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 DSPPQ9NZW4 1301 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 PLCE1Q9P212 2302 aa1.14□□□□□ -2.23
SYNE2-210ENST00000553455 CADP27708 2225 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 NSD1Q96L73 2696 aaPredicted RBP1.13□□□□□ -2.23
SYNE2-210ENST00000553455 ACANP16112 2415 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.13□□□□□ -2.23
SYNE2-210ENST00000553455 A0A096LPI6 279 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 GNG14A0A1W2PPG7 69 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 OR2T8A6NH00 312 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 PPP5D1E7EU14 171 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 EDF1O60869 148 aaKnown RBP1.13□□□□□ -2.23
SYNE2-210ENST00000553455 IFNA4P05014 189 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 HMGN2P05204 90 aaKnown RBP1.13□□□□□ -2.23
SYNE2-210ENST00000553455 LINC00032P0C843 101 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 POLR2JP52435 117 aaKnown RBP1.13□□□□□ -2.23
SYNE2-210ENST00000553455 HBBP68871 147 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 RTL8BQ17RB0 113 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 TRIQKQ629K1 86 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 C4orf33Q8N1A6 199 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 SAR1AQ9NR31 198 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 OTORQ9NRC9 128 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 CALML5Q9NZT1 146 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 BOKQ9UMX3 212 aaPredicted RBP1.13□□□□□ -2.23
SYNE2-210ENST00000553455 NDUFAF1Q9Y375 327 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 MED13LQ71F56 2210 aa1.13□□□□□ -2.23
SYNE2-210ENST00000553455 CHD3Q12873 2000 aaKnown RBP1.13□□□□□ -2.23
SYNE2-210ENST00000553455 TEP1Q99973 2627 aaKnown RBP1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms