RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 ZNRF2Q8NHG8 242 aa14.84□□□□□ -0.03
NEK3-202ENST00000550841 DNAJC30Q96LL9 226 aa14.84□□□□□ -0.03
NEK3-202ENST00000550841 PLECQ15149 4684 aaKnown RBP14.84□□□□□ -0.03
NEK3-202ENST00000550841 M0QY20 66 aa14.83□□□□□ -0.04
NEK3-202ENST00000550841 CAMPP49913 170 aa14.83□□□□□ -0.04
NEK3-202ENST00000550841 TIRAPP58753 221 aa14.83□□□□□ -0.04
NEK3-202ENST00000550841 MRPL54Q6P161 138 aaKnown RBP14.83□□□□□ -0.04
NEK3-202ENST00000550841 RASL11AQ6T310 242 aa14.83□□□□□ -0.04
NEK3-202ENST00000550841 TNFRSF18Q9Y5U5 241 aa14.83□□□□□ -0.04
NEK3-202ENST00000550841 TRAV9-1A0A075B6T8 112 aa14.82□□□□□ -0.04
NEK3-202ENST00000550841 LINC00588Q9Y4M8 146 aa14.82□□□□□ -0.04
NEK3-202ENST00000550841 DNAH1Q9P2D7 4330 aa14.81□□□□□ -0.04
NEK3-202ENST00000550841 A0A1B0GXF2 115 aa14.81□□□□□ -0.04
NEK3-202ENST00000550841 NEXN-AS1Q8NBZ9 246 aa14.81□□□□□ -0.04
NEK3-202ENST00000550841 GTSF1LQ9H1H1 148 aa14.81□□□□□ -0.04
NEK3-202ENST00000550841 NIT2Q9NQR4 276 aa14.81□□□□□ -0.04
NEK3-202ENST00000550841 Q9UF83 564 aa14.81□□□□□ -0.04
NEK3-202ENST00000550841 EPPK1P58107 5090 aaKnown RBP14.81□□□□□ -0.04
NEK3-202ENST00000550841 LYSTQ99698 3801 aa14.81□□□□□ -0.04
NEK3-202ENST00000550841 LINC00694P0DN24 101 aa14.8□□□□□ -0.04
NEK3-202ENST00000550841 RAB4AP20338 218 aa14.8□□□□□ -0.04
NEK3-202ENST00000550841 MRPS16Q9Y3D3 137 aaKnown RBP14.8□□□□□ -0.04
NEK3-202ENST00000550841 UBE2D3P61077 147 aa14.79□□□□□ -0.04
NEK3-202ENST00000550841 UBE2D2P62837 147 aa14.79□□□□□ -0.04
NEK3-202ENST00000550841 FAM104BQ5XKR9 115 aa14.79□□□□□ -0.04
NEK3-202ENST00000550841 AMN1Q8IY45 258 aa14.79□□□□□ -0.04
NEK3-202ENST00000550841 GATD1Q8NB37 220 aa14.79□□□□□ -0.04
NEK3-202ENST00000550841 MRAP2Q96G30 205 aa14.79□□□□□ -0.04
NEK3-202ENST00000550841 UPK3BQ9BT76 320 aa14.79□□□□□ -0.04
NEK3-202ENST00000550841 RNF185Q96GF1 192 aa14.78□□□□□ -0.04
NEK3-202ENST00000550841 PPP1R17O96001 155 aa14.77□□□□□ -0.05
NEK3-202ENST00000550841 DAZ4Q86SG3 579 aaKnown RBP14.77□□□□□ -0.05
NEK3-202ENST00000550841 DAZ3Q9NR90 486 aaKnown RBP14.77□□□□□ -0.05
NEK3-202ENST00000550841 BIRC6Q9NR09 4857 aa14.76□□□□□ -0.05
NEK3-202ENST00000550841 TRAV26-2A0A0B4J265 109 aa14.76□□□□□ -0.05
NEK3-202ENST00000550841 TMEM97Q5BJF2 176 aa14.76□□□□□ -0.05
NEK3-202ENST00000550841 TRAV8-6A0A0B4J262 113 aa14.75□□□□□ -0.05
NEK3-202ENST00000550841 LELP1Q5T871 98 aa14.75□□□□□ -0.05
NEK3-202ENST00000550841 Q9H8V8 135 aa14.75□□□□□ -0.05
NEK3-202ENST00000550841 URGCP-MRPS24S4R325 110 aa14.74□□□□□ -0.05
NEK3-202ENST00000550841 MRPL51Q4U2R6 128 aaKnown RBP14.73□□□□□ -0.05
NEK3-202ENST00000550841 OR10J3Q5JRS4 329 aa14.73□□□□□ -0.05
NEK3-202ENST00000550841 HYDINQ4G0P3 5121 aa14.72□□□□□ -0.05
NEK3-202ENST00000550841 PPBPP02775 128 aa14.72□□□□□ -0.05
NEK3-202ENST00000550841 CKS2P33552 79 aa14.72□□□□□ -0.05
NEK3-202ENST00000550841 COX19Q49B96 90 aa14.72□□□□□ -0.05
NEK3-202ENST00000550841 ALMS1Q8TCU4 4167 aa14.72□□□□□ -0.05
NEK3-202ENST00000550841 TRBV6-5A0A0K0K1A5 114 aa14.71□□□□□ -0.05
NEK3-202ENST00000550841 SIVA1O15304 175 aa14.71□□□□□ -0.05
NEK3-202ENST00000550841 RPL39LQ96EH5 51 aaKnown RBP14.71□□□□□ -0.05
NEK3-202ENST00000550841 ST20Q9HBF5 79 aa14.71□□□□□ -0.05
NEK3-202ENST00000550841 IGHV3-38A0A0C4DH36 116 aa14.69□□□□□ -0.06
NEK3-202ENST00000550841 TRBV6-8A0A0A6YYG3 113 aa14.68□□□□□ -0.06
NEK3-202ENST00000550841 TRAV9-2A0A087WT02 112 aa14.67□□□□□ -0.06
NEK3-202ENST00000550841 SDHAF1A6NFY7 115 aa14.67□□□□□ -0.06
NEK3-202ENST00000550841 SMKR1H3BMG3 65 aa14.67□□□□□ -0.06
NEK3-202ENST00000550841 ATRAIDQ6UW56 229 aa14.67□□□□□ -0.06
NEK3-202ENST00000550841 TMEM136Q6ZRR5 245 aa14.67□□□□□ -0.06
NEK3-202ENST00000550841 GNB1LQ9BYB4 327 aa14.67□□□□□ -0.06
NEK3-202ENST00000550841 IGLV2-18A0A075B6J9 118 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 K7EP13 123 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 PHOX2AO14813 284 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 GAS8-AS1O95177 125 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 NCR2O95944 276 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 HLA-DQA1P01909 254 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 PMCHP20382 165 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 COTL1Q14019 142 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 TTC32Q5I0X7 151 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 ORMDL3Q8N138 153 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 SMCO4Q9NRQ5 59 aa14.66□□□□□ -0.06
NEK3-202ENST00000550841 VPS13DQ5THJ4 4388 aa14.65□□□□□ -0.06
NEK3-202ENST00000550841 TRBV24-1A0A075B6N3 115 aa14.65□□□□□ -0.06
NEK3-202ENST00000550841 TRBV25-1A0A075B6N4 114 aa14.65□□□□□ -0.06
NEK3-202ENST00000550841 D6R8Y8 96 aa14.65□□□□□ -0.06
NEK3-202ENST00000550841 I3L3M4 83 aa14.65□□□□□ -0.06
NEK3-202ENST00000550841 RPS10P46783 165 aaKnown RBP14.65□□□□□ -0.06
NEK3-202ENST00000550841 ELOBQ15370 118 aa14.65□□□□□ -0.06
NEK3-202ENST00000550841 WFDC10BQ8IUB3 73 aa14.65□□□□□ -0.06
NEK3-202ENST00000550841 NRACQ8N912 160 aa14.65□□□□□ -0.06
NEK3-202ENST00000550841 C20orf78Q9BR46 151 aa14.65□□□□□ -0.06
NEK3-202ENST00000550841 IGHV1-24A0A0C4DH33 117 aa14.64□□□□□ -0.07
NEK3-202ENST00000550841 NBDYA0A0U1RRE5 68 aa14.64□□□□□ -0.07
NEK3-202ENST00000550841 VCYO14598 125 aa14.64□□□□□ -0.07
NEK3-202ENST00000550841 MT-ND6P03923 174 aa14.64□□□□□ -0.07
NEK3-202ENST00000550841 DNAH10OSP0CZ25 163 aa14.64□□□□□ -0.07
NEK3-202ENST00000550841 PKIAP61925 76 aa14.64□□□□□ -0.07
NEK3-202ENST00000550841 SUMO2P61956 95 aaKnown RBP14.64□□□□□ -0.07
NEK3-202ENST00000550841 LAMTOR2Q9Y2Q5 125 aa14.64□□□□□ -0.07
NEK3-202ENST00000550841 TNFRSF6BO95407 300 aa14.63□□□□□ -0.07
NEK3-202ENST00000550841 APCSP02743 223 aa14.63□□□□□ -0.07
NEK3-202ENST00000550841 POLR2KP53803 58 aaKnown RBP14.63□□□□□ -0.07
NEK3-202ENST00000550841 PRELID3AQ96N28 172 aa14.63□□□□□ -0.07
NEK3-202ENST00000550841 TMEM70Q9BUB7 260 aa14.63□□□□□ -0.07
NEK3-202ENST00000550841 TGIF2-C20orf24A0A0A6YYL0 155 aa14.62□□□□□ -0.07
NEK3-202ENST00000550841 IQCJQ1A5X6 159 aa14.62□□□□□ -0.07
NEK3-202ENST00000550841 LINC01556Q5JQF7 62 aa14.62□□□□□ -0.07
NEK3-202ENST00000550841 NTM-AS1Q6ZSK4 140 aa14.62□□□□□ -0.07
NEK3-202ENST00000550841 TRBV27A0A0K0K1C4 114 aa14.61□□□□□ -0.07
NEK3-202ENST00000550841 M0R2N4 97 aa14.61□□□□□ -0.07
NEK3-202ENST00000550841 RPL32P62910 135 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms