RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 M0R2P5 195 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 NHLRC4P0CG21 123 aaPredicted RBP9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 PF4V1P10720 104 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 RAX2Q96IS3 184 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 MUC4Q99102 2169 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 H3BUX3 64 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 ZNF22P17026 224 aaPredicted RBP9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 GATA3P23771 443 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 GAGE2BQ13066 116 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 LINC01620Q4KN68 170 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 GAGE2EQ4V326 116 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 TRPT1Q86TN4 253 aaKnown RBP9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 MUSTN1Q8IVN3 82 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 Q8N1Y9 231 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 C9orf85Q96MD7 179 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 GAGE2DQ9UEU5 116 aa9.5□□□□□ -0.89
CALCOCO1-217ENST00000549935 TRBV10-2A0A0K0K1G8 114 aa9.49□□□□□ -0.89
CALCOCO1-217ENST00000549935 M0QY20 66 aa9.49□□□□□ -0.89
CALCOCO1-217ENST00000549935 SNCGO76070 127 aa9.49□□□□□ -0.89
CALCOCO1-217ENST00000549935 ODF3Q96PU9 254 aa9.49□□□□□ -0.89
CALCOCO1-217ENST00000549935 JPT2Q9H910 190 aa9.49□□□□□ -0.89
CALCOCO1-217ENST00000549935 F5H697 171 aa9.49□□□□□ -0.89
CALCOCO1-217ENST00000549935 TGFAP01135 160 aa9.49□□□□□ -0.89
CALCOCO1-217ENST00000549935 GNLYP22749 145 aa9.49□□□□□ -0.89
CALCOCO1-217ENST00000549935 BLCAPP62952 87 aa9.49□□□□□ -0.89
CALCOCO1-217ENST00000549935 SPANXA1Q9NS26 97 aa9.49□□□□□ -0.89
CALCOCO1-217ENST00000549935 CELSR2Q9HCU4 2923 aa9.48□□□□□ -0.89
CALCOCO1-217ENST00000549935 A0A087WWL8 130 aa9.48□□□□□ -0.89
CALCOCO1-217ENST00000549935 IGHG2P01859 326 aa9.48□□□□□ -0.89
CALCOCO1-217ENST00000549935 NDUFV3P56181 108 aaKnown RBP9.48□□□□□ -0.89
CALCOCO1-217ENST00000549935 C20orf203Q8NBC4 194 aa9.48□□□□□ -0.89
CALCOCO1-217ENST00000549935 PIMREGQ9BSJ6 248 aa9.48□□□□□ -0.89
CALCOCO1-217ENST00000549935 RHPN1-AS1Q9BWJ2 59 aa9.48□□□□□ -0.89
CALCOCO1-217ENST00000549935 TRAV2A0A0B4J234 112 aa9.47□□□□□ -0.89
CALCOCO1-217ENST00000549935 MRPL23Q16540 153 aaKnown RBP9.47□□□□□ -0.89
CALCOCO1-217ENST00000549935 NTN5Q8WTR8 489 aaPredicted RBP9.47□□□□□ -0.89
CALCOCO1-217ENST00000549935 SPG11Q96JI7 2443 aa9.47□□□□□ -0.89
CALCOCO1-217ENST00000549935 IGHV3-16A0A0C4DH30 117 aa9.47□□□□□ -0.89
CALCOCO1-217ENST00000549935 A0A0J9YXY3 114 aa9.47□□□□□ -0.89
CALCOCO1-217ENST00000549935 EDN2P20800 178 aa9.47□□□□□ -0.89
CALCOCO1-217ENST00000549935 CRYBG3Q68DQ2 2970 aa9.46□□□□□ -0.89
CALCOCO1-217ENST00000549935 ID1P41134 155 aa9.46□□□□□ -0.89
CALCOCO1-217ENST00000549935 DAZ1Q9NQZ3 744 aaKnown RBP9.46□□□□□ -0.89
CALCOCO1-217ENST00000549935 TRAV4A0A0B4J268 109 aa9.46□□□□□ -0.9
CALCOCO1-217ENST00000549935 A6NDX4 124 aa9.46□□□□□ -0.9
CALCOCO1-217ENST00000549935 K7EMT4 169 aa9.46□□□□□ -0.9
CALCOCO1-217ENST00000549935 DEFB104AQ8WTQ1 72 aa9.46□□□□□ -0.9
CALCOCO1-217ENST00000549935 CCL19Q99731 98 aa9.46□□□□□ -0.9
CALCOCO1-217ENST00000549935 LITAFQ99732 161 aa9.46□□□□□ -0.9
CALCOCO1-217ENST00000549935 PYGO1Q9Y3Y4 419 aa9.46□□□□□ -0.9
CALCOCO1-217ENST00000549935 IGLV4-3A0A075B6K6 122 aa9.45□□□□□ -0.9
CALCOCO1-217ENST00000549935 I3L3M4 83 aa9.45□□□□□ -0.9
CALCOCO1-217ENST00000549935 ELANEP08246 267 aa9.45□□□□□ -0.9
CALCOCO1-217ENST00000549935 IFITM1P13164 125 aa9.45□□□□□ -0.9
CALCOCO1-217ENST00000549935 SPANXDQ9BXN6 97 aa9.45□□□□□ -0.9
CALCOCO1-217ENST00000549935 EDA2RQ9HAV5 297 aa9.45□□□□□ -0.9
CALCOCO1-217ENST00000549935 SPANXCQ9NY87 97 aa9.45□□□□□ -0.9
CALCOCO1-217ENST00000549935 ZNF256Q9Y2P7 627 aaPredicted RBP9.45□□□□□ -0.9
CALCOCO1-217ENST00000549935 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.45□□□□□ -0.94e-6■■□□□ 12.9
CALCOCO1-217ENST00000549935 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 GAGE12JA6NER3 117 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 H3BT86 120 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 TRIAP1O43715 76 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 GAGE7O76087 117 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 GAGE12FP0CL80 117 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 GAGE12GP0CL81 117 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 GAGE12IP0CL82 117 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 GAGE4Q13068 117 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 C10orf105Q8TEF2 133 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 DCANP1Q8TF63 244 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 OPRPNQ99935 248 aaPredicted RBP9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 FAM240AA0A1B0GVK7 77 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 CRLF1O75462 422 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 MRPS36P82909 103 aaKnown RBP9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 Q1RN00 199 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 TTC32Q5I0X7 151 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 SS18L2Q9UHA2 77 aa9.44□□□□□ -0.9
CALCOCO1-217ENST00000549935 TRAV12-3A0A0B4J271 114 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 A0A0J9YXV3 536 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 H3BMM0 161 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 IGHV3-30-3P0DP02 117 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 TMEM95Q3KNT9 176 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 DEFB121Q5J5C9 76 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 UBE2WQ96B02 151 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 IGHV4-30-2A0A087WSY4 118 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 TEX49A0A1B0GTD5 131 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 B5MCH6 92 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 ZNF56Q15929 161 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 FAM74A4Q5TZK3 123 aa9.43□□□□□ -0.9
CALCOCO1-217ENST00000549935 CSMD2Q7Z408 3487 aa9.42□□□□□ -0.9
CALCOCO1-217ENST00000549935 H7C2G1 150 aa9.42□□□□□ -0.9
CALCOCO1-217ENST00000549935 ATP5J2P56134 94 aa9.42□□□□□ -0.9
CALCOCO1-217ENST00000549935 RNF152Q8N8N0 203 aa9.42□□□□□ -0.9
CALCOCO1-217ENST00000549935 MSMBP08118 114 aa9.41□□□□□ -0.9
CALCOCO1-217ENST00000549935 COX6CP09669 75 aa9.41□□□□□ -0.9
CALCOCO1-217ENST00000549935 TIMM21Q9BVV7 248 aa9.41□□□□□ -0.9
CALCOCO1-217ENST00000549935 ICOSQ9Y6W8 199 aa9.41□□□□□ -0.9
CALCOCO1-217ENST00000549935 CSPG4Q6UVK1 2322 aa9.41□□□□□ -0.9
CALCOCO1-217ENST00000549935 IGHV1-58A0A0C4DH39 117 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms