RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 DMRTA1Q5VZB9 504 aa10.07□□□□□ -0.8
RTN3-211ENST00000542238 DNAJC30Q96LL9 226 aa10.07□□□□□ -0.8
RTN3-211ENST00000542238 B4DEV8 164 aa10.06□□□□□ -0.8
RTN3-211ENST00000542238 H3BVH4 76 aa10.06□□□□□ -0.8
RTN3-211ENST00000542238 S100A8P05109 93 aa10.06□□□□□ -0.8
RTN3-211ENST00000542238 C12orf57Q99622 126 aa10.06□□□□□ -0.8
RTN3-211ENST00000542238 RPS10P5Q9NQ39 176 aa10.06□□□□□ -0.8
RTN3-211ENST00000542238 LRP1Q07954 4544 aaKnown RBP10.05□□□□□ -0.8
RTN3-211ENST00000542238 TRAV34A0A0B4J273 112 aa10.05□□□□□ -0.8
RTN3-211ENST00000542238 C7orf77A4D0Y5 90 aa10.05□□□□□ -0.8
RTN3-211ENST00000542238 SMIM6P0DI80 62 aa10.05□□□□□ -0.8
RTN3-211ENST00000542238 MBD3L1Q8WWY6 194 aa10.05□□□□□ -0.8
RTN3-211ENST00000542238 C1orf43Q9BWL3 253 aa10.05□□□□□ -0.8
RTN3-211ENST00000542238 ARL2-SNX15V9GYD0 113 aa10.05□□□□□ -0.8
RTN3-211ENST00000542238 TRAV1-1A0A0B4J248 108 aa10.04□□□□□ -0.8
RTN3-211ENST00000542238 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
RTN3-211ENST00000542238 ARMS2P0C7Q2 107 aa10.04□□□□□ -0.8
RTN3-211ENST00000542238 RPL37AP61513 92 aaKnown RBP10.04□□□□□ -0.8
RTN3-211ENST00000542238 ZNF726P1Q15940 193 aa10.04□□□□□ -0.8
RTN3-211ENST00000542238 HMCN2Q8NDA2 5059 aa10.03□□□□□ -0.8
RTN3-211ENST00000542238 A0A087WWL8 130 aa10.03□□□□□ -0.8
RTN3-211ENST00000542238 C5orf52A6NGY3 159 aa10.03□□□□□ -0.8
RTN3-211ENST00000542238 TMEM262E9PQX1 116 aa10.03□□□□□ -0.8
RTN3-211ENST00000542238 RPL36AP83881 106 aaKnown RBP10.03□□□□□ -0.8
RTN3-211ENST00000542238 DNLZQ5SXM8 178 aa10.03□□□□□ -0.8
RTN3-211ENST00000542238 RPL36ALQ969Q0 106 aaKnown RBP10.03□□□□□ -0.8
RTN3-211ENST00000542238 SFRP2Q96HF1 295 aa10.03□□□□□ -0.8
RTN3-211ENST00000542238 PHLDA3Q9Y5J5 127 aa10.03□□□□□ -0.8
RTN3-211ENST00000542238 TRBV10-1A0A0K0K1A3 114 aa10.02□□□□□ -0.81
RTN3-211ENST00000542238 M0R036 132 aa10.02□□□□□ -0.81
RTN3-211ENST00000542238 CRPP02741 224 aa10.02□□□□□ -0.81
RTN3-211ENST00000542238 ZFP82Q8N141 532 aa10.02□□□□□ -0.81
RTN3-211ENST00000542238 FAM213BQ8TBF2 198 aa10.02□□□□□ -0.81
RTN3-211ENST00000542238 TCEAL7Q9BRU2 100 aa10.02□□□□□ -0.81
RTN3-211ENST00000542238 EIF5A2Q9GZV4 153 aaKnown RBP10.02□□□□□ -0.81
RTN3-211ENST00000542238 UBR4Q5T4S7 5183 aa10.02□□□□□ -0.81
RTN3-211ENST00000542238 TRBV7-3A0A075B6L6 115 aa10.01□□□□□ -0.81
RTN3-211ENST00000542238 GRIFINA4D1Z8 144 aa10.01□□□□□ -0.81
RTN3-211ENST00000542238 PCP4L1A6NKN8 68 aa10.01□□□□□ -0.81
RTN3-211ENST00000542238 M0R381 172 aa10.01□□□□□ -0.81
RTN3-211ENST00000542238 RAB5AP20339 215 aa10.01□□□□□ -0.81
RTN3-211ENST00000542238 Q86TA4 180 aa10.01□□□□□ -0.81
RTN3-211ENST00000542238 YPEL4Q96NS1 127 aa10.01□□□□□ -0.81
RTN3-211ENST00000542238 MAP1LC3B2A6NCE7 125 aa10□□□□□ -0.81
RTN3-211ENST00000542238 PEX7O00628 323 aa10□□□□□ -0.81
RTN3-211ENST00000542238 FHITP49789 147 aa10□□□□□ -0.81
RTN3-211ENST00000542238 UBE2D3P61077 147 aa10□□□□□ -0.81
RTN3-211ENST00000542238 UBE2D2P62837 147 aa10□□□□□ -0.81
RTN3-211ENST00000542238 FAM162BQ5T6X4 162 aa10□□□□□ -0.81
RTN3-211ENST00000542238 ZC2HC1AQ96GY0 325 aa10□□□□□ -0.81
RTN3-211ENST00000542238 MAP1LC3BQ9GZQ8 125 aa10□□□□□ -0.81
RTN3-211ENST00000542238 ZFP30Q9Y2G7 519 aa10□□□□□ -0.81
RTN3-211ENST00000542238 SH2D1AO60880 128 aa9.99□□□□□ -0.81
RTN3-211ENST00000542238 S100A6P06703 90 aa9.99□□□□□ -0.81
RTN3-211ENST00000542238 SRP19P09132 144 aaKnown RBP9.99□□□□□ -0.81
RTN3-211ENST00000542238 UBE2G2P60604 165 aa9.99□□□□□ -0.81
RTN3-211ENST00000542238 SNRPEP62304 92 aaKnown RBP9.99□□□□□ -0.81
RTN3-211ENST00000542238 ENHOQ6UWT2 76 aa9.99□□□□□ -0.81
RTN3-211ENST00000542238 TRBV6-8A0A0A6YYG3 113 aa9.98□□□□□ -0.81
RTN3-211ENST00000542238 USP17L23D6RBM5 183 aa9.98□□□□□ -0.81
RTN3-211ENST00000542238 HLA-DQA1P01909 254 aa9.98□□□□□ -0.81
RTN3-211ENST00000542238 ANGP03950 147 aaKnown RBP9.98□□□□□ -0.81
RTN3-211ENST00000542238 S100A9P06702 114 aaKnown RBP9.98□□□□□ -0.81
RTN3-211ENST00000542238 AKR1C3P42330 323 aa9.98□□□□□ -0.81
RTN3-211ENST00000542238 CRIP1P50238 77 aa9.98□□□□□ -0.81
RTN3-211ENST00000542238 PKIAP61925 76 aa9.98□□□□□ -0.81
RTN3-211ENST00000542238 DGAT2L7PQ6IED9 249 aa9.98□□□□□ -0.81
RTN3-211ENST00000542238 TMSB15BA0A087X1C1 80 aa9.97□□□□□ -0.81
RTN3-211ENST00000542238 UBE2G1P62253 170 aa9.97□□□□□ -0.81
RTN3-211ENST00000542238 OR10G8Q8NGN5 311 aa9.97□□□□□ -0.81
RTN3-211ENST00000542238 FAT3Q8TDW7 4589 aa9.96□□□□□ -0.81
RTN3-211ENST00000542238 TAGLN2P37802 199 aaKnown RBP9.96□□□□□ -0.82
RTN3-211ENST00000542238 RAB4BP61018 213 aa9.96□□□□□ -0.82
RTN3-211ENST00000542238 CCL20P78556 96 aa9.96□□□□□ -0.82
RTN3-211ENST00000542238 MIAQ16674 131 aa9.96□□□□□ -0.82
RTN3-211ENST00000542238 LINC01559Q495D7 138 aa9.96□□□□□ -0.82
RTN3-211ENST00000542238 MPV17L2Q567V2 206 aa9.96□□□□□ -0.82
RTN3-211ENST00000542238 COX8CQ7Z4L0 72 aa9.96□□□□□ -0.82
RTN3-211ENST00000542238 ISOC2Q96AB3 205 aa9.96□□□□□ -0.82
RTN3-211ENST00000542238 DAZAP1Q96EP5 407 aaKnown RBP9.96□□□□□ -0.82
RTN3-211ENST00000542238 FMC1Q96HJ9 113 aa9.96□□□□□ -0.82
RTN3-211ENST00000542238 CHCHD5Q9BSY4 110 aa9.96□□□□□ -0.82
RTN3-211ENST00000542238 NDUFS6O75380 124 aaKnown RBP9.95□□□□□ -0.82
RTN3-211ENST00000542238 PRSS1P07477 247 aa9.95□□□□□ -0.82
RTN3-211ENST00000542238 HNRNPA3P51991 378 aaKnown RBP9.95□□□□□ -0.82
RTN3-211ENST00000542238 ZNF56Q15929 161 aa9.95□□□□□ -0.82
RTN3-211ENST00000542238 ZNF674Q2M3X9 581 aa9.95□□□□□ -0.82
RTN3-211ENST00000542238 C9orf163Q8N9P6 203 aa9.95□□□□□ -0.82
RTN3-211ENST00000542238 MANBALQ9NQG1 85 aa9.95□□□□□ -0.82
RTN3-211ENST00000542238 FABP9Q0Z7S8 132 aa9.94□□□□□ -0.82
RTN3-211ENST00000542238 RPL19P84098 196 aaKnown RBP9.93□□□□□ -0.82
RTN3-211ENST00000542238 TMEM97Q5BJF2 176 aa9.93□□□□□ -0.82
RTN3-211ENST00000542238 NEXN-AS1Q8NBZ9 246 aa9.93□□□□□ -0.82
RTN3-211ENST00000542238 A0A1B0GV50 99 aa9.92□□□□□ -0.82
RTN3-211ENST00000542238 PNRC1Q12796 327 aaPredicted RBP9.92□□□□□ -0.82
RTN3-211ENST00000542238 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.92□□□□□ -0.82
RTN3-211ENST00000542238 TRBV6-1A0A0K0K1D8 114 aa9.91□□□□□ -0.82
RTN3-211ENST00000542238 LTAP01374 205 aa9.91□□□□□ -0.82
RTN3-211ENST00000542238 IFNA1P01562 189 aa9.91□□□□□ -0.82
RTN3-211ENST00000542238 S100PP25815 95 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms