RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 CRYBA4P53673 196 aa11.36□□□□□ -0.59
CLPTM1-202ENST00000541297 TMEM61Q8N0U2 210 aa11.36□□□□□ -0.59
CLPTM1-202ENST00000541297 KRTAP10-3P60369 221 aa11.35□□□□□ -0.59
CLPTM1-202ENST00000541297 A0A1B0GV72 72 aa11.35□□□□□ -0.59
CLPTM1-202ENST00000541297 IGKV3-20P01619 116 aa11.35□□□□□ -0.59
CLPTM1-202ENST00000541297 J3QR89 54 aa11.34□□□□□ -0.59
CLPTM1-202ENST00000541297 TRBV7-3A0A075B6L6 115 aa11.34□□□□□ -0.59
CLPTM1-202ENST00000541297 SCGB1A1P11684 91 aa11.34□□□□□ -0.59
CLPTM1-202ENST00000541297 RRN3P1Q2M238 152 aa11.34□□□□□ -0.59
CLPTM1-202ENST00000541297 GAGE13Q4V321 117 aa11.34□□□□□ -0.59
CLPTM1-202ENST00000541297 TEP1Q99973 2627 aaKnown RBP11.33□□□□□ -0.6
CLPTM1-202ENST00000541297 PLNP26678 52 aa11.33□□□□□ -0.6
CLPTM1-202ENST00000541297 INSL3P51460 131 aa11.33□□□□□ -0.6
CLPTM1-202ENST00000541297 ZFAND2AQ8N6M9 145 aa11.33□□□□□ -0.6
CLPTM1-202ENST00000541297 ADARB2-AS1A8MUL3 147 aa11.33□□□□□ -0.6
CLPTM1-202ENST00000541297 SPANXN1Q5VSR9 72 aa11.33□□□□□ -0.6
CLPTM1-202ENST00000541297 PRO0461Q9UI25 63 aa11.33□□□□□ -0.6
CLPTM1-202ENST00000541297 CYSRT1A8MQ03 144 aa11.32□□□□□ -0.6
CLPTM1-202ENST00000541297 DEFB114Q30KQ6 69 aa11.32□□□□□ -0.6
CLPTM1-202ENST00000541297 SPATA25Q9BR10 227 aa11.32□□□□□ -0.6
CLPTM1-202ENST00000541297 H7C1H1 209 aa11.32□□□□□ -0.6
CLPTM1-202ENST00000541297 RNASE4P34096 147 aaKnown RBP11.32□□□□□ -0.6
CLPTM1-202ENST00000541297 LENEPQ9Y5L5 61 aa11.32□□□□□ -0.6
CLPTM1-202ENST00000541297 CYSLTR1Q9Y271 337 aa11.31□□□□□ -0.6
CLPTM1-202ENST00000541297 MYMXA0A1B0GTQ4 84 aa11.31□□□□□ -0.6
CLPTM1-202ENST00000541297 F8VRH5 84 aa11.31□□□□□ -0.6
CLPTM1-202ENST00000541297 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
CLPTM1-202ENST00000541297 VWFP04275 2813 aa11.31□□□□□ -0.6
CLPTM1-202ENST00000541297 A0A0J9YX75 114 aa11.3□□□□□ -0.6
CLPTM1-202ENST00000541297 OR11H12B2RN74 326 aa11.3□□□□□ -0.6
CLPTM1-202ENST00000541297 H3BVH4 76 aa11.3□□□□□ -0.6
CLPTM1-202ENST00000541297 OR11H2Q8NH07 326 aa11.3□□□□□ -0.6
CLPTM1-202ENST00000541297 SPRY2O43597 315 aa11.3□□□□□ -0.6
CLPTM1-202ENST00000541297 DEFB131AP59861 70 aa11.3□□□□□ -0.6
CLPTM1-202ENST00000541297 CKS1BP61024 79 aa11.3□□□□□ -0.6
CLPTM1-202ENST00000541297 ATRQ13535 2644 aa11.3□□□□□ -0.6
CLPTM1-202ENST00000541297 TRAV12-1A0A0B4J245 112 aa11.29□□□□□ -0.6
CLPTM1-202ENST00000541297 A0A1B0GWB2 263 aa11.29□□□□□ -0.6
CLPTM1-202ENST00000541297 MORN3Q6PF18 240 aaPredicted RBP11.29□□□□□ -0.6
CLPTM1-202ENST00000541297 SCGB3A1Q96QR1 104 aa11.29□□□□□ -0.6
CLPTM1-202ENST00000541297 SMIM2Q9BVW6 85 aa11.29□□□□□ -0.6
CLPTM1-202ENST00000541297 IGHV4-4A0A075B6R2 117 aa11.29□□□□□ -0.6
CLPTM1-202ENST00000541297 KNCNA6PVL3 124 aa11.29□□□□□ -0.6
CLPTM1-202ENST00000541297 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.28□□□□□ -0.6
CLPTM1-202ENST00000541297 TRAV12-2A0A075B6T6 113 aa11.28□□□□□ -0.6
CLPTM1-202ENST00000541297 TRAV21A0A0B4J279 112 aa11.27□□□□□ -0.61
CLPTM1-202ENST00000541297 NEXN-AS1Q8NBZ9 246 aa11.27□□□□□ -0.61
CLPTM1-202ENST00000541297 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
CLPTM1-202ENST00000541297 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.61
CLPTM1-202ENST00000541297 APRG1Q8IVJ8 170 aa11.27□□□□□ -0.61
CLPTM1-202ENST00000541297 TOMM6Q96B49 74 aa11.27□□□□□ -0.61
CLPTM1-202ENST00000541297 MRAP2Q96G30 205 aa11.27□□□□□ -0.61
CLPTM1-202ENST00000541297 TRAV12-3A0A0B4J271 114 aa11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 A6NJY4 79 aa11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 C20orf78Q9BR46 151 aa11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 KLLNB2CW77 178 aa11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 M0R381 172 aa11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 APOMO95445 188 aa11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 ORMDL2Q53FV1 153 aa11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 NDUFA11Q86Y39 141 aa11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 RASL10AQ92737 203 aa11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 RPL39LQ96EH5 51 aaKnown RBP11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 MAP6D1Q9H9H5 199 aa11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 ZNF256Q9Y2P7 627 aaPredicted RBP11.26□□□□□ -0.61
CLPTM1-202ENST00000541297 SUMO2P61956 95 aaKnown RBP11.25□□□□□ -0.61
CLPTM1-202ENST00000541297 ANXA2RQ3ZCQ2 193 aa11.25□□□□□ -0.61
CLPTM1-202ENST00000541297 SFTA2Q6UW10 78 aa11.25□□□□□ -0.61
CLPTM1-202ENST00000541297 PRADC1Q9BSG0 188 aa11.25□□□□□ -0.61
CLPTM1-202ENST00000541297 MRPL16Q9NX20 251 aaKnown RBP11.25□□□□□ -0.61
CLPTM1-202ENST00000541297 TRBV7-9A0A0J9YWB2 115 aa11.24□□□□□ -0.61
CLPTM1-202ENST00000541297 PF4P02776 101 aa11.24□□□□□ -0.61
CLPTM1-202ENST00000541297 BAALCQ8WXS3 180 aa11.24□□□□□ -0.61
CLPTM1-202ENST00000541297 LINC01549A6NIU2 74 aa11.24□□□□□ -0.61
CLPTM1-202ENST00000541297 SMCPP49901 116 aaPredicted RBP11.24□□□□□ -0.61
CLPTM1-202ENST00000541297 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
CLPTM1-202ENST00000541297 TRAV2A0A0B4J234 112 aa11.23□□□□□ -0.61
CLPTM1-202ENST00000541297 ZNF815PA8K554 130 aa11.23□□□□□ -0.61
CLPTM1-202ENST00000541297 GNRH2O43555 120 aa11.23□□□□□ -0.61
CLPTM1-202ENST00000541297 DUSP14O95147 198 aaKnown RBP11.23□□□□□ -0.61
CLPTM1-202ENST00000541297 FOXI1Q12951 378 aa11.23□□□□□ -0.61
CLPTM1-202ENST00000541297 C2orf66Q6UXQ4 117 aa11.23□□□□□ -0.61
CLPTM1-202ENST00000541297 C14orf178Q8N769 122 aaPredicted RBP11.23□□□□□ -0.61
CLPTM1-202ENST00000541297 PRSS29PA6NIE9 313 aa11.23□□□□□ -0.61
CLPTM1-202ENST00000541297 SCGB1D4Q6XE38 83 aa11.23□□□□□ -0.61
CLPTM1-202ENST00000541297 CFAP126Q5VTH2 177 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 SRSF9Q13242 221 aaKnown RBP eCLIP11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 ZFP2Q6ZN57 461 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 TRRAPQ9Y4A5 3859 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 LOC107984156A0A0G2JMH3 177 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 H3BMM0 161 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 S100A4P26447 101 aaKnown RBP11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 PSMB2P49721 201 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 ODF3L2Q3SX64 289 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 NFE4Q86UQ8 179 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 ARL17AQ8IVW1 177 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 SYT8Q8NBV8 401 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
CLPTM1-202ENST00000541297 TRAV25A0A0B4J276 109 aa11.21□□□□□ -0.61
CLPTM1-202ENST00000541297 MGPP08493 103 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms