RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 TMEM191AQ9H0A3 160 aa11.52□□□□□ -0.57
UBC-208ENST00000540700 ICOSQ9Y6W8 199 aa11.52□□□□□ -0.57
UBC-208ENST00000540700 GAGE12JA6NER3 117 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 F5H697 171 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 M0QY20 66 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 CAMPP49913 170 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 GAGE1Q13065 139 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 GAGE4Q13068 117 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 GAGE5Q13069 117 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 GAGE13Q4V321 117 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 AMN1Q8IY45 258 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 GATD1Q8NB37 220 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 NEXN-AS1Q8NBZ9 246 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 IMMP2LQ96T52 175 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 TMEM242Q9NWH2 141 aa11.51□□□□□ -0.57
UBC-208ENST00000540700 SNAPINO95295 136 aa11.5□□□□□ -0.57
UBC-208ENST00000540700 ESRGQ1W209 222 aa11.5□□□□□ -0.57
UBC-208ENST00000540700 PRADC1Q9BSG0 188 aa11.5□□□□□ -0.57
UBC-208ENST00000540700 URGCP-MRPS24S4R325 110 aa11.5□□□□□ -0.57
UBC-208ENST00000540700 RAB4AP20338 218 aa11.49□□□□□ -0.57
UBC-208ENST00000540700 HBBP68871 147 aa11.49□□□□□ -0.57
UBC-208ENST00000540700 MRPL23Q16540 153 aaKnown RBP11.49□□□□□ -0.57
UBC-208ENST00000540700 LINC00588Q9Y4M8 146 aa11.49□□□□□ -0.57
UBC-208ENST00000540700 PKD1P98161 4303 aa11.49□□□□□ -0.57
UBC-208ENST00000540700 PRSS29PA6NIE9 313 aa11.48□□□□□ -0.57
UBC-208ENST00000540700 SRIP30626 198 aa11.48□□□□□ -0.57
UBC-208ENST00000540700 ATP5L2Q7Z4Y8 100 aa11.48□□□□□ -0.57
UBC-208ENST00000540700 ZNRF2Q8NHG8 242 aa11.48□□□□□ -0.57
UBC-208ENST00000540700 TRBV10-1A0A0K0K1A3 114 aa11.47□□□□□ -0.57
UBC-208ENST00000540700 SMKR1H3BMG3 65 aa11.47□□□□□ -0.57
UBC-208ENST00000540700 FAM104BQ5XKR9 115 aa11.47□□□□□ -0.57
UBC-208ENST00000540700 LYPD5Q6UWN5 251 aa11.47□□□□□ -0.57
UBC-208ENST00000540700 SMIM15Q7Z3B0 74 aa11.47□□□□□ -0.57
UBC-208ENST00000540700 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
UBC-208ENST00000540700 BTF3L4Q96K17 158 aa11.47□□□□□ -0.57
UBC-208ENST00000540700 A0A1B0GW15 77 aa11.46□□□□□ -0.57
UBC-208ENST00000540700 NCR2O95944 276 aa11.46□□□□□ -0.57
UBC-208ENST00000540700 RPS10P46783 165 aaKnown RBP11.46□□□□□ -0.57
UBC-208ENST00000540700 UBE2D3P61077 147 aa11.46□□□□□ -0.57
UBC-208ENST00000540700 UBE2D2P62837 147 aa11.46□□□□□ -0.57
UBC-208ENST00000540700 MRPL51Q4U2R6 128 aaKnown RBP11.46□□□□□ -0.57
UBC-208ENST00000540700 NEGR1Q7Z3B1 354 aa11.46□□□□□ -0.57
UBC-208ENST00000540700 YPEL4Q96NS1 127 aa11.46□□□□□ -0.57
UBC-208ENST00000540700 M0R2N4 97 aa11.45□□□□□ -0.58
UBC-208ENST00000540700 KCNIP4Q6PIL6 250 aa11.45□□□□□ -0.58
UBC-208ENST00000540700 RASL11AQ6T310 242 aa11.45□□□□□ -0.58
UBC-208ENST00000540700 HSPG2P98160 4391 aa11.44□□□□□ -0.58
UBC-208ENST00000540700 TRBV7-3A0A075B6L6 115 aa11.44□□□□□ -0.58
UBC-208ENST00000540700 TGIF2-C20orf24A0A0A6YYL0 155 aa11.44□□□□□ -0.58
UBC-208ENST00000540700 IGHV3-38A0A0C4DH36 116 aa11.44□□□□□ -0.58
UBC-208ENST00000540700 RTL8CO15255 209 aa11.44□□□□□ -0.58
UBC-208ENST00000540700 ELOBQ15370 118 aa11.44□□□□□ -0.58
UBC-208ENST00000540700 ATP6V0E2Q8NHE4 81 aa11.44□□□□□ -0.58
UBC-208ENST00000540700 TRAV9-1A0A075B6T8 112 aa11.43□□□□□ -0.58
UBC-208ENST00000540700 RPL36AP83881 106 aaKnown RBP11.43□□□□□ -0.58
UBC-208ENST00000540700 TMEM136Q6ZRR5 245 aa11.43□□□□□ -0.58
UBC-208ENST00000540700 CBLN2Q8IUK8 224 aa11.43□□□□□ -0.58
UBC-208ENST00000540700 NRACQ8N912 160 aa11.43□□□□□ -0.58
UBC-208ENST00000540700 RPL36ALQ969Q0 106 aaKnown RBP11.43□□□□□ -0.58
UBC-208ENST00000540700 S100PP25815 95 aa11.42□□□□□ -0.58
UBC-208ENST00000540700 NIT2Q9NQR4 276 aa11.42□□□□□ -0.58
UBC-208ENST00000540700 MRPS16Q9Y3D3 137 aaKnown RBP11.42□□□□□ -0.58
UBC-208ENST00000540700 H7C1H1 209 aa11.41□□□□□ -0.58
UBC-208ENST00000540700 S100A8P05109 93 aa11.41□□□□□ -0.58
UBC-208ENST00000540700 CCL18P55774 89 aa11.41□□□□□ -0.58
UBC-208ENST00000540700 DEFB104AQ8WTQ1 72 aa11.41□□□□□ -0.58
UBC-208ENST00000540700 MRAP2Q96G30 205 aa11.41□□□□□ -0.58
UBC-208ENST00000540700 DNAJC30Q96LL9 226 aa11.41□□□□□ -0.58
UBC-208ENST00000540700 GTSF1LQ9H1H1 148 aa11.41□□□□□ -0.58
UBC-208ENST00000540700 TIRAPP58753 221 aa11.4□□□□□ -0.58
UBC-208ENST00000540700 NTM-AS1Q6ZSK4 140 aa11.4□□□□□ -0.58
UBC-208ENST00000540700 UBE2DNLQ8IWF7 75 aa11.4□□□□□ -0.58
UBC-208ENST00000540700 HERC1Q15751 4861 aa11.4□□□□□ -0.58
UBC-208ENST00000540700 TRBV6-5A0A0K0K1A5 114 aa11.39□□□□□ -0.59
UBC-208ENST00000540700 D6R8Y8 96 aa11.39□□□□□ -0.59
UBC-208ENST00000540700 SCO1O75880 301 aa11.39□□□□□ -0.59
UBC-208ENST00000540700 OR10J3Q5JRS4 329 aa11.39□□□□□ -0.59
UBC-208ENST00000540700 SH2D6Q7Z4S9 175 aa11.39□□□□□ -0.59
UBC-208ENST00000540700 WFDC10BQ8IUB3 73 aa11.39□□□□□ -0.59
UBC-208ENST00000540700 FRZBQ92765 325 aa11.39□□□□□ -0.59
UBC-208ENST00000540700 UPK3BQ9BT76 320 aa11.39□□□□□ -0.59
UBC-208ENST00000540700 TNFRSF18Q9Y5U5 241 aa11.39□□□□□ -0.59
UBC-208ENST00000540700 TRBV24-1A0A075B6N3 115 aa11.38□□□□□ -0.59
UBC-208ENST00000540700 ATP6V1G1O75348 118 aa11.37□□□□□ -0.59
UBC-208ENST00000540700 NPYP01303 97 aa11.37□□□□□ -0.59
UBC-208ENST00000540700 LELP1Q5T871 98 aa11.37□□□□□ -0.59
UBC-208ENST00000540700 Q8N3U1 123 aa11.37□□□□□ -0.59
UBC-208ENST00000540700 IGLV2-18A0A075B6J9 118 aa11.36□□□□□ -0.59
UBC-208ENST00000540700 SDHAF1A6NFY7 115 aa11.36□□□□□ -0.59
UBC-208ENST00000540700 CKS2P33552 79 aa11.36□□□□□ -0.59
UBC-208ENST00000540700 POLR2KP53803 58 aaKnown RBP11.36□□□□□ -0.59
UBC-208ENST00000540700 KIAA1644Q3SXP7 199 aa11.36□□□□□ -0.59
UBC-208ENST00000540700 DAZ4Q86SG3 579 aaKnown RBP11.36□□□□□ -0.59
UBC-208ENST00000540700 TMEM70Q9BUB7 260 aa11.36□□□□□ -0.59
UBC-208ENST00000540700 GNB1LQ9BYB4 327 aa11.36□□□□□ -0.59
UBC-208ENST00000540700 DAZ3Q9NR90 486 aaKnown RBP11.36□□□□□ -0.59
UBC-208ENST00000540700 SMCO4Q9NRQ5 59 aa11.36□□□□□ -0.59
UBC-208ENST00000540700 TNFRSF6BO95407 300 aa11.35□□□□□ -0.59
UBC-208ENST00000540700 KRTAP1-5Q9BYS1 174 aa11.35□□□□□ -0.59
UBC-208ENST00000540700 Q9H8V8 135 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms