RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CYSRT1A8MQ03 144 aa12.66□□□□□ -0.38
PCDHB17P-201ENST00000539533 IGKV3-20P01619 116 aa12.66□□□□□ -0.38
PCDHB17P-201ENST00000539533 CKS1BP61024 79 aa12.66□□□□□ -0.38
PCDHB17P-201ENST00000539533 RNASE4P34096 147 aaKnown RBP12.66□□□□□ -0.38
PCDHB17P-201ENST00000539533 MTURNQ8N3F0 131 aa12.66□□□□□ -0.38
PCDHB17P-201ENST00000539533 AMTNQ6UX39 209 aa12.65□□□□□ -0.38
PCDHB17P-201ENST00000539533 MAPKAPK5-AS1Q8N8E1 139 aa12.65□□□□□ -0.38
PCDHB17P-201ENST00000539533 A0A087WX48 190 aa12.65□□□□□ -0.38
PCDHB17P-201ENST00000539533 JMJD1CQ15652 2540 aa12.64□□□□□ -0.39
PCDHB17P-201ENST00000539533 SPANXN1Q5VSR9 72 aa12.64□□□□□ -0.39
PCDHB17P-201ENST00000539533 IGHV4-4A0A075B6R2 117 aa12.64□□□□□ -0.39
PCDHB17P-201ENST00000539533 DEFB131AP59861 70 aa12.64□□□□□ -0.39
PCDHB17P-201ENST00000539533 C12orf74Q32Q52 190 aa12.64□□□□□ -0.39
PCDHB17P-201ENST00000539533 APRG1Q8IVJ8 170 aa12.64□□□□□ -0.39
PCDHB17P-201ENST00000539533 TRBV7-9A0A0J9YWB2 115 aa12.63□□□□□ -0.39
PCDHB17P-201ENST00000539533 GAGE13Q4V321 117 aa12.63□□□□□ -0.39
PCDHB17P-201ENST00000539533 TENM1Q9UKZ4 2725 aa12.63□□□□□ -0.39
PCDHB17P-201ENST00000539533 TRAV21A0A0B4J279 112 aa12.63□□□□□ -0.39
PCDHB17P-201ENST00000539533 PLNP26678 52 aa12.63□□□□□ -0.39
PCDHB17P-201ENST00000539533 INSL3P51460 131 aa12.63□□□□□ -0.39
PCDHB17P-201ENST00000539533 KNCNA6PVL3 124 aa12.62□□□□□ -0.39
PCDHB17P-201ENST00000539533 KLLNB2CW77 178 aa12.62□□□□□ -0.39
PCDHB17P-201ENST00000539533 TAL2Q16559 108 aa12.62□□□□□ -0.39
PCDHB17P-201ENST00000539533 TRAV2A0A0B4J234 112 aa12.62□□□□□ -0.39
PCDHB17P-201ENST00000539533 NDUFA11Q86Y39 141 aa12.62□□□□□ -0.39
PCDHB17P-201ENST00000539533 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.62□□□□□ -0.39
PCDHB17P-201ENST00000539533 ZNF256Q9Y2P7 627 aaPredicted RBP12.62□□□□□ -0.39
PCDHB17P-201ENST00000539533 H3BVH4 76 aa12.61□□□□□ -0.39
PCDHB17P-201ENST00000539533 MRAP2Q96G30 205 aa12.61□□□□□ -0.39
PCDHB17P-201ENST00000539533 SMIM2Q9BVW6 85 aa12.61□□□□□ -0.39
PCDHB17P-201ENST00000539533 TRAV12-2A0A075B6T6 113 aa12.6□□□□□ -0.39
PCDHB17P-201ENST00000539533 TRAV26-1A0A087WT03 109 aa12.6□□□□□ -0.39
PCDHB17P-201ENST00000539533 ANXA2RQ3ZCQ2 193 aa12.6□□□□□ -0.39
PCDHB17P-201ENST00000539533 HIST1H4GQ99525 98 aa12.6□□□□□ -0.39
PCDHB17P-201ENST00000539533 MAP6D1Q9H9H5 199 aa12.6□□□□□ -0.39
PCDHB17P-201ENST00000539533 PRO0461Q9UI25 63 aa12.6□□□□□ -0.39
PCDHB17P-201ENST00000539533 TRAV12-1A0A0B4J245 112 aa12.59□□□□□ -0.39
PCDHB17P-201ENST00000539533 TRAV12-3A0A0B4J271 114 aa12.59□□□□□ -0.39
PCDHB17P-201ENST00000539533 H7C1H1 209 aa12.59□□□□□ -0.39
PCDHB17P-201ENST00000539533 DUSP14O95147 198 aaKnown RBP12.59□□□□□ -0.39
PCDHB17P-201ENST00000539533 SPINK13Q1W4C9 94 aa12.59□□□□□ -0.39
PCDHB17P-201ENST00000539533 TMEM238LA0A1B0GVL6 79 aa12.59□□□□□ -0.39
PCDHB17P-201ENST00000539533 F8VRH5 84 aa12.59□□□□□ -0.39
PCDHB17P-201ENST00000539533 RRN3P1Q2M238 152 aa12.59□□□□□ -0.39
PCDHB17P-201ENST00000539533 TEP1Q99973 2627 aaKnown RBP12.58□□□□□ -0.39
PCDHB17P-201ENST00000539533 TRAV25A0A0B4J276 109 aa12.58□□□□□ -0.4
PCDHB17P-201ENST00000539533 A0A1B0GWB2 263 aa12.58□□□□□ -0.4
PCDHB17P-201ENST00000539533 ODF3Q96PU9 254 aa12.58□□□□□ -0.4
PCDHB17P-201ENST00000539533 GNRH2O43555 120 aa12.58□□□□□ -0.4
PCDHB17P-201ENST00000539533 C20orf78Q9BR46 151 aa12.58□□□□□ -0.4
PCDHB17P-201ENST00000539533 VWFP04275 2813 aa12.57□□□□□ -0.4
PCDHB17P-201ENST00000539533 H3BMM0 161 aa12.57□□□□□ -0.4
PCDHB17P-201ENST00000539533 SPRY2O43597 315 aa12.57□□□□□ -0.4
PCDHB17P-201ENST00000539533 APOMO95445 188 aa12.57□□□□□ -0.4
PCDHB17P-201ENST00000539533 CRYBA4P53673 196 aa12.57□□□□□ -0.4
PCDHB17P-201ENST00000539533 ORMDL2Q53FV1 153 aa12.57□□□□□ -0.4
PCDHB17P-201ENST00000539533 GEMIN7Q9H840 131 aaKnown RBP12.57□□□□□ -0.4
PCDHB17P-201ENST00000539533 ATRQ13535 2644 aa12.57□□□□□ -0.4
PCDHB17P-201ENST00000539533 TRBV7-3A0A075B6L6 115 aa12.56□□□□□ -0.4
PCDHB17P-201ENST00000539533 SCGB3A1Q96QR1 104 aa12.56□□□□□ -0.4
PCDHB17P-201ENST00000539533 OR11H12B2RN74 326 aa12.56□□□□□ -0.4
PCDHB17P-201ENST00000539533 PF4P02776 101 aa12.56□□□□□ -0.4
PCDHB17P-201ENST00000539533 ODF3L2Q3SX64 289 aa12.56□□□□□ -0.4
PCDHB17P-201ENST00000539533 OR11H2Q8NH07 326 aa12.56□□□□□ -0.4
PCDHB17P-201ENST00000539533 TOMM6Q96B49 74 aa12.56□□□□□ -0.4
PCDHB17P-201ENST00000539533 MYMXA0A1B0GTQ4 84 aa12.55□□□□□ -0.4
PCDHB17P-201ENST00000539533 RBMY1BA6NDE4 496 aaKnown RBP12.55□□□□□ -0.4
PCDHB17P-201ENST00000539533 RBMY1EA6NEQ0 496 aaKnown RBP12.55□□□□□ -0.4
PCDHB17P-201ENST00000539533 M0R381 172 aa12.55□□□□□ -0.4
PCDHB17P-201ENST00000539533 RBMY1DP0C7P1 496 aaKnown RBP12.55□□□□□ -0.4
PCDHB17P-201ENST00000539533 SUMO2P61956 95 aaKnown RBP12.55□□□□□ -0.4
PCDHB17P-201ENST00000539533 RASL10AQ92737 203 aa12.55□□□□□ -0.4
PCDHB17P-201ENST00000539533 NEXN-AS1Q8NBZ9 246 aa12.55□□□□□ -0.4
PCDHB17P-201ENST00000539533 MRPL16Q9NX20 251 aaKnown RBP12.55□□□□□ -0.4
PCDHB17P-201ENST00000539533 IGLV1-51P01701 117 aa12.54□□□□□ -0.4
PCDHB17P-201ENST00000539533 FAM159AQ6UWV7 190 aa12.54□□□□□ -0.4
PCDHB17P-201ENST00000539533 S100A4P26447 101 aaKnown RBP12.54□□□□□ -0.4
PCDHB17P-201ENST00000539533 LINC00482Q8N8I6 264 aa12.54□□□□□ -0.4
PCDHB17P-201ENST00000539533 SYT8Q8NBV8 401 aa12.54□□□□□ -0.4
PCDHB17P-201ENST00000539533 A8MTW9 85 aa12.53□□□□□ -0.4
PCDHB17P-201ENST00000539533 ASIPP42127 132 aa12.53□□□□□ -0.4
PCDHB17P-201ENST00000539533 FOXI1Q12951 378 aa12.53□□□□□ -0.4
PCDHB17P-201ENST00000539533 RPL39LQ96EH5 51 aaKnown RBP12.53□□□□□ -0.4
PCDHB17P-201ENST00000539533 DPH3P1Q9H4G8 78 aa12.52□□□□□ -0.4
PCDHB17P-201ENST00000539533 RNASE3P12724 160 aaKnown RBP12.52□□□□□ -0.41
PCDHB17P-201ENST00000539533 C14orf178Q8N769 122 aaPredicted RBP12.52□□□□□ -0.41
PCDHB17P-201ENST00000539533 SPATA3Q8NHX4 192 aa12.52□□□□□ -0.41
PCDHB17P-201ENST00000539533 C1QTNF4Q9BXJ3 329 aa12.52□□□□□ -0.41
PCDHB17P-201ENST00000539533 CITED1Q99966 193 aa12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 CDIP1Q9H305 208 aa12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 CYSLTR1Q9Y271 337 aa12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 CD7P09564 240 aa12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 SPINK8P0C7L1 97 aa12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 RBMY1A1P0DJD3 496 aaKnown RBP12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 RBMY1CP0DJD4 496 aa12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 RBMY1FQ15415 496 aaKnown RBP12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 MORN3Q6PF18 240 aaPredicted RBP12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 C2orf66Q6UXQ4 117 aa12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 BAALCQ8WXS3 180 aa12.51□□□□□ -0.41
PCDHB17P-201ENST00000539533 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms