RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 H0YJX3 145 aa-0.33□□□□□ -2.46
CCDC7-208ENST00000537047 CFDP00746 253 aaPredicted RBP-0.33□□□□□ -2.46
CCDC7-208ENST00000537047 LINC01545Q5VT33 79 aa-0.33□□□□□ -2.46
CCDC7-208ENST00000537047 UBE2DNLQ8IWF7 75 aa-0.33□□□□□ -2.46
CCDC7-208ENST00000537047 CYP4F30PQ9H0H9 118 aa-0.33□□□□□ -2.46
CCDC7-208ENST00000537047 NDUFA12Q9UI09 145 aa-0.33□□□□□ -2.46
CCDC7-208ENST00000537047 NCOR1O75376 2440 aa-0.33□□□□□ -2.46
CCDC7-208ENST00000537047 NBEAL1Q6ZS30 2694 aa-0.33□□□□□ -2.46
CCDC7-208ENST00000537047 BPTFQ12830 3046 aa-0.34□□□□□ -2.46
CCDC7-208ENST00000537047 TRGV1A0A0A0MS02 117 aa-0.34□□□□□ -2.46
CCDC7-208ENST00000537047 A0A0D9SFI3 127 aa-0.34□□□□□ -2.46
CCDC7-208ENST00000537047 KRTAP19-7Q3SYF9 63 aa-0.34□□□□□ -2.46
CCDC7-208ENST00000537047 SPANXN1Q5VSR9 72 aa-0.34□□□□□ -2.46
CCDC7-208ENST00000537047 PHIPQ8WWQ0 1821 aa-0.34□□□□□ -2.46
CCDC7-208ENST00000537047 LAMA2P24043 3122 aaKnown RBP-0.34□□□□□ -2.46
CCDC7-208ENST00000537047 F8P00451 2351 aa-0.34□□□□□ -2.46
CCDC7-208ENST00000537047 AKAP11Q9UKA4 1901 aa-0.34□□□□□ -2.46
CCDC7-208ENST00000537047 ERCC6Q03468 1493 aa-0.35□□□□□ -2.46
CCDC7-208ENST00000537047 AHCTF1Q8WYP5 2266 aa-0.35□□□□□ -2.47
CCDC7-208ENST00000537047 ZNF815PA8K554 130 aa-0.35□□□□□ -2.47
CCDC7-208ENST00000537047 SSBP3-AS1Q7Z2R9 100 aa-0.35□□□□□ -2.47
CCDC7-208ENST00000537047 VSTM2AQ8TAG5 236 aa-0.35□□□□□ -2.47
CCDC7-208ENST00000537047 WNK2Q9Y3S1 2297 aa-0.35□□□□□ -2.47
CCDC7-208ENST00000537047 NRXN2Q9P2S2 1712 aa-0.35□□□□□ -2.47
CCDC7-208ENST00000537047 LAMB1P07942 1786 aa-0.36□□□□□ -2.47
CCDC7-208ENST00000537047 PIN1P1O15428 100 aa-0.36□□□□□ -2.47
CCDC7-208ENST00000537047 SPINK8P0C7L1 97 aa-0.36□□□□□ -2.47
CCDC7-208ENST00000537047 EDDM3BP56851 147 aa-0.36□□□□□ -2.47
CCDC7-208ENST00000537047 TAC4Q86UU9 113 aa-0.36□□□□□ -2.47
CCDC7-208ENST00000537047 CNFNQ9BYD5 112 aa-0.36□□□□□ -2.47
CCDC7-208ENST00000537047 RPRMQ9NS64 109 aa-0.36□□□□□ -2.47
CCDC7-208ENST00000537047 PTPN13Q12923 2485 aa-0.36□□□□□ -2.47
CCDC7-208ENST00000537047 RIF1Q5UIP0 2472 aaKnown RBP-0.36□□□□□ -2.47
CCDC7-208ENST00000537047 ACANP16112 2415 aa-0.36□□□□□ -2.47
CCDC7-208ENST00000537047 LAMA5O15230 3695 aa-0.37□□□□□ -2.47
CCDC7-208ENST00000537047 DOCK11Q5JSL3 2073 aa-0.37□□□□□ -2.47
CCDC7-208ENST00000537047 TRBV10-3A0A0K0K1G6 114 aa-0.37□□□□□ -2.47
CCDC7-208ENST00000537047 A6NIN4 97 aa-0.37□□□□□ -2.47
CCDC7-208ENST00000537047 C9orf116Q5BN46 136 aaPredicted RBP-0.37□□□□□ -2.47
CCDC7-208ENST00000537047 RPL7L1Q6DKI1 246 aaKnown RBP-0.37□□□□□ -2.47
CCDC7-208ENST00000537047 AIF1LQ9BQI0 150 aa-0.37□□□□□ -2.47
CCDC7-208ENST00000537047 TGP01266 2768 aa-0.37□□□□□ -2.47
CCDC7-208ENST00000537047 CHD9Q3L8U1 2897 aa-0.37□□□□□ -2.47
CCDC7-208ENST00000537047 PARP14Q460N5 1801 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 LRP1BQ9NZR2 4599 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 IFNA17P01571 189 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 PIRTP0C851 137 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 SCGB1A1P11684 91 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 KRTAP19-8Q3LI54 63 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 Q5VV11 94 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 MIC13Q5XKP0 118 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 WFDC6Q9BQY6 131 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 IBTKQ9P2D0 1353 aaPredicted RBP-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 SETXQ7Z333 2677 aaKnown RBP-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 OVOS2A0A0J9YW53 1432 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 OVOS2Q6IE36 1432 aa-0.38□□□□□ -2.47
CCDC7-208ENST00000537047 SYNJ1O43426 1573 aa-0.39□□□□□ -2.47
CCDC7-208ENST00000537047 GOLGA3Q08378 1498 aa-0.39□□□□□ -2.47
CCDC7-208ENST00000537047 B2MP61769 119 aa-0.39□□□□□ -2.47
CCDC7-208ENST00000537047 MRPL40Q9NQ50 206 aaKnown RBP-0.39□□□□□ -2.47
CCDC7-208ENST00000537047 PRO0255Q9UI72 69 aa-0.39□□□□□ -2.47
CCDC7-208ENST00000537047 NHSL1Q5SYE7 1610 aa-0.39□□□□□ -2.47
CCDC7-208ENST00000537047 FLNAP21333 2647 aaKnown RBP-0.39□□□□□ -2.47
CCDC7-208ENST00000537047 DISP2A7MBM2 1401 aa-0.39□□□□□ -2.47
CCDC7-208ENST00000537047 FASNP49327 2511 aaKnown RBP-0.39□□□□□ -2.47
CCDC7-208ENST00000537047 CELSR3Q9NYQ7 3312 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 HSPG2P98160 4391 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 TRAV1-2A0A0B4J238 106 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 G3V318 75 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 J3QR89 54 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 M0R3E3 92 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 IGLC6P0CF74 106 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 SMIM6P0DI80 62 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 UBE2D1P51668 147 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 WFDC2Q14508 124 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 CTAGE3PQ8IX95 158 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 BIVM-ERCC5R4GMW8 1640 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 USP9YO00507 2555 aaPredicted RBP-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 PDZD2O15018 2839 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 CHD6Q8TD26 2715 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 LAMA3Q16787 3333 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 FAM208BQ5VWN6 2430 aa-0.4□□□□□ -2.47
CCDC7-208ENST00000537047 ZNF292O60281 2723 aa-0.41□□□□□ -2.47
CCDC7-208ENST00000537047 FAM236AA0A1B0GUQ0 79 aa-0.41□□□□□ -2.48
CCDC7-208ENST00000537047 FAM236BA0A1B0GV22 79 aa-0.41□□□□□ -2.48
CCDC7-208ENST00000537047 APOC4-APOC2K7ER74 178 aa-0.41□□□□□ -2.48
CCDC7-208ENST00000537047 NCR2O95944 276 aa-0.41□□□□□ -2.48
CCDC7-208ENST00000537047 HIST1H1AQ02539 215 aaPredicted RBP-0.41□□□□□ -2.48
CCDC7-208ENST00000537047 C10orf82Q8WW14 230 aa-0.41□□□□□ -2.48
CCDC7-208ENST00000537047 PYDC1Q8WXC3 89 aa-0.41□□□□□ -2.48
CCDC7-208ENST00000537047 GSKIPQ9P0R6 139 aa-0.41□□□□□ -2.48
CCDC7-208ENST00000537047 MYH13Q9UKX3 1938 aa-0.41□□□□□ -2.48
CCDC7-208ENST00000537047 DAPK1P53355 1430 aa-0.41□□□□□ -2.48
CCDC7-208ENST00000537047 USP9XQ93008 2570 aaPredicted RBP-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 EPG5Q9HCE0 2579 aa-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 MUC22E2RYF6 1773 aaPredicted RBP-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 CLPSL1A2RUU4 121 aa-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 TSPAN19P0C672 248 aa-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 PIPP12273 146 aaPredicted RBP-0.42□□□□□ -2.48
CCDC7-208ENST00000537047 UBE2G1P62253 170 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms