RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 FAM231BA6NCW3 169 aa12.12□□□□□ -0.47
DDX55-204ENST00000536079 DNAH10OSP0CZ25 163 aa12.12□□□□□ -0.47
DDX55-204ENST00000536079 OR10J3Q5JRS4 329 aa12.12□□□□□ -0.47
DDX55-204ENST00000536079 C6orf223Q8N319 242 aa12.12□□□□□ -0.47
DDX55-204ENST00000536079 A0A1B0GUT8 65 aa12.11□□□□□ -0.47
DDX55-204ENST00000536079 COMMD7Q86VX2 200 aa12.11□□□□□ -0.47
DDX55-204ENST00000536079 GATD1Q8NB37 220 aa12.11□□□□□ -0.47
DDX55-204ENST00000536079 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
DDX55-204ENST00000536079 DNAH11Q96DT5 4516 aa12.1□□□□□ -0.47
DDX55-204ENST00000536079 GAS8-AS1O95177 125 aa12.1□□□□□ -0.47
DDX55-204ENST00000536079 TTC32Q5I0X7 151 aa12.1□□□□□ -0.47
DDX55-204ENST00000536079 TRAV8-6A0A0B4J262 113 aa12.09□□□□□ -0.47
DDX55-204ENST00000536079 TMEM218A2RU14 115 aa12.09□□□□□ -0.47
DDX55-204ENST00000536079 LINC00862A6NCI5 91 aa12.09□□□□□ -0.47
DDX55-204ENST00000536079 UQCC3Q6UW78 93 aa12.09□□□□□ -0.47
DDX55-204ENST00000536079 NTM-AS1Q6ZSK4 140 aa12.09□□□□□ -0.47
DDX55-204ENST00000536079 NAT8BQ9UHF3 227 aa12.09□□□□□ -0.47
DDX55-204ENST00000536079 PRSS29PA6NIE9 313 aa12.08□□□□□ -0.48
DDX55-204ENST00000536079 IGHV3-30P01768 117 aa12.08□□□□□ -0.48
DDX55-204ENST00000536079 IGHV3-33P01772 117 aa12.08□□□□□ -0.48
DDX55-204ENST00000536079 IGHV3-30-3P0DP02 117 aa12.08□□□□□ -0.48
DDX55-204ENST00000536079 IGHV3-30-5P0DP03 117 aa12.08□□□□□ -0.48
DDX55-204ENST00000536079 LINC01556Q5JQF7 62 aa12.08□□□□□ -0.48
DDX55-204ENST00000536079 RASL11AQ6T310 242 aa12.08□□□□□ -0.48
DDX55-204ENST00000536079 Q6ZRN7 208 aaPredicted RBP12.08□□□□□ -0.48
DDX55-204ENST00000536079 DEFB104AQ8WTQ1 72 aa12.08□□□□□ -0.48
DDX55-204ENST00000536079 RNF185Q96GF1 192 aa12.08□□□□□ -0.48
DDX55-204ENST00000536079 PKD1P98161 4303 aa12.08□□□□□ -0.48
DDX55-204ENST00000536079 A0A1B0GVY2 172 aa12.07□□□□□ -0.48
DDX55-204ENST00000536079 TNP2Q05952 138 aa12.07□□□□□ -0.48
DDX55-204ENST00000536079 BORCS7Q96B45 105 aa12.07□□□□□ -0.48
DDX55-204ENST00000536079 RPL39LQ96EH5 51 aaKnown RBP12.07□□□□□ -0.48
DDX55-204ENST00000536079 LINC00336Q6ZUF6 198 aa12.06□□□□□ -0.48
DDX55-204ENST00000536079 DNAJC30Q96LL9 226 aa12.06□□□□□ -0.48
DDX55-204ENST00000536079 TMEM191AQ9H0A3 160 aa12.06□□□□□ -0.48
DDX55-204ENST00000536079 NIT2Q9NQR4 276 aa12.06□□□□□ -0.48
DDX55-204ENST00000536079 A0A087WWC5 75 aa12.05□□□□□ -0.48
DDX55-204ENST00000536079 H7C1H1 209 aa12.05□□□□□ -0.48
DDX55-204ENST00000536079 PNRC1Q12796 327 aaPredicted RBP12.05□□□□□ -0.48
DDX55-204ENST00000536079 RIGQ13278 110 aa12.05□□□□□ -0.48
DDX55-204ENST00000536079 SMIM15Q7Z3B0 74 aa12.05□□□□□ -0.48
DDX55-204ENST00000536079 AMN1Q8IY45 258 aa12.05□□□□□ -0.48
DDX55-204ENST00000536079 TRBV6-8A0A0A6YYG3 113 aa12.04□□□□□ -0.48
DDX55-204ENST00000536079 F8W036 122 aa12.04□□□□□ -0.48
DDX55-204ENST00000536079 RAB4AP20338 218 aa12.04□□□□□ -0.48
DDX55-204ENST00000536079 DAZ4Q86SG3 579 aaKnown RBP12.04□□□□□ -0.48
DDX55-204ENST00000536079 NIT1Q86X76 327 aa12.04□□□□□ -0.48
DDX55-204ENST00000536079 DAZ3Q9NR90 486 aaKnown RBP12.04□□□□□ -0.48
DDX55-204ENST00000536079 MRPL54Q6P161 138 aaKnown RBP12.03□□□□□ -0.48
DDX55-204ENST00000536079 TRAV9-2A0A087WT02 112 aa12.02□□□□□ -0.49
DDX55-204ENST00000536079 A0A1B0GXF2 115 aa12.02□□□□□ -0.49
DDX55-204ENST00000536079 IBA57-AS1B1ANH7 110 aa12.02□□□□□ -0.49
DDX55-204ENST00000536079 SMKR1H3BMG3 65 aa12.02□□□□□ -0.49
DDX55-204ENST00000536079 RPS10P46783 165 aaKnown RBP12.02□□□□□ -0.49
DDX55-204ENST00000536079 CAMPP49913 170 aa12.02□□□□□ -0.49
DDX55-204ENST00000536079 DYNC1H1Q14204 4646 aaKnown RBP12.02□□□□□ -0.49
DDX55-204ENST00000536079 PPP1R2P9O14990 202 aa12.01□□□□□ -0.49
DDX55-204ENST00000536079 SEC11CQ9BY50 192 aa12.01□□□□□ -0.49
DDX55-204ENST00000536079 PKHD1P08F94 4074 aa12.01□□□□□ -0.49
DDX55-204ENST00000536079 NCR2O95944 276 aa12□□□□□ -0.49
DDX55-204ENST00000536079 MT-ND4LP03901 98 aa12□□□□□ -0.49
DDX55-204ENST00000536079 ANAPC16Q96DE5 110 aa12□□□□□ -0.49
DDX55-204ENST00000536079 K7EP13 123 aa11.99□□□□□ -0.49
DDX55-204ENST00000536079 BTF3P20290 206 aaKnown RBP11.99□□□□□ -0.49
DDX55-204ENST00000536079 MRPL51Q4U2R6 128 aaKnown RBP11.99□□□□□ -0.49
DDX55-204ENST00000536079 C10orf91Q5T1B1 145 aa11.99□□□□□ -0.49
DDX55-204ENST00000536079 FAM104BQ5XKR9 115 aa11.99□□□□□ -0.49
DDX55-204ENST00000536079 C10orf126Q8N4M7 172 aa11.99□□□□□ -0.49
DDX55-204ENST00000536079 GAGE6Q13070 117 aa11.98□□□□□ -0.49
DDX55-204ENST00000536079 IQCJQ1A5X6 159 aa11.98□□□□□ -0.49
DDX55-204ENST00000536079 MPV17L2Q567V2 206 aa11.98□□□□□ -0.49
DDX55-204ENST00000536079 FRZBQ92765 325 aa11.98□□□□□ -0.49
DDX55-204ENST00000536079 CHCHD5Q9BSY4 110 aa11.98□□□□□ -0.49
DDX55-204ENST00000536079 Q9HAA7 133 aa11.98□□□□□ -0.49
DDX55-204ENST00000536079 TMEM262E9PQX1 116 aa11.97□□□□□ -0.49
DDX55-204ENST00000536079 HBBP68871 147 aa11.97□□□□□ -0.49
DDX55-204ENST00000536079 NRACQ8N912 160 aa11.97□□□□□ -0.49
DDX55-204ENST00000536079 MRAP2Q96G30 205 aa11.97□□□□□ -0.49
DDX55-204ENST00000536079 IGHV1-24A0A0C4DH33 117 aa11.96□□□□□ -0.49
DDX55-204ENST00000536079 TRBV6-5A0A0K0K1A5 114 aa11.96□□□□□ -0.49
DDX55-204ENST00000536079 SDHAF1A6NFY7 115 aa11.96□□□□□ -0.49
DDX55-204ENST00000536079 ATRAIDQ6UW56 229 aa11.96□□□□□ -0.49
DDX55-204ENST00000536079 Q8N976 141 aa11.96□□□□□ -0.49
DDX55-204ENST00000536079 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.96□□□□□ -0.49
DDX55-204ENST00000536079 KLK12Q9UKR0 248 aa11.96□□□□□ -0.49
DDX55-204ENST00000536079 CARHSP1Q9Y2V2 147 aaKnown RBP11.96□□□□□ -0.49
DDX55-204ENST00000536079 TRBV25-1A0A075B6N4 114 aa11.95□□□□□ -0.5
DDX55-204ENST00000536079 A0A1B0GW15 77 aa11.95□□□□□ -0.5
DDX55-204ENST00000536079 TMEM97Q5BJF2 176 aa11.95□□□□□ -0.5
DDX55-204ENST00000536079 A0A087WX48 190 aa11.94□□□□□ -0.5
DDX55-204ENST00000536079 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
DDX55-204ENST00000536079 TMEM70Q9BUB7 260 aa11.94□□□□□ -0.5
DDX55-204ENST00000536079 URGCP-MRPS24S4R325 110 aa11.94□□□□□ -0.5
DDX55-204ENST00000536079 FUSP35637 526 aaKnown RBP eCLIP11.93□□□□□ -0.5
DDX55-204ENST00000536079 POLR2KP53803 58 aaKnown RBP11.93□□□□□ -0.5
DDX55-204ENST00000536079 RBX1P62877 108 aa11.93□□□□□ -0.5
DDX55-204ENST00000536079 COTL1Q14019 142 aa11.93□□□□□ -0.5
DDX55-204ENST00000536079 KCNIP4Q6PIL6 250 aa11.93□□□□□ -0.5
DDX55-204ENST00000536079 ATP5L2Q7Z4Y8 100 aa11.93□□□□□ -0.5
DDX55-204ENST00000536079 TMEM243Q9BU79 118 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms