RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 IGHV3-38A0A0C4DH36 116 aa15.42■□□□□ 0.06
SFSWAP-204ENST00000535399 FAM231BA6NCW3 169 aa15.42■□□□□ 0.06
SFSWAP-204ENST00000535399 M0QY20 66 aa15.42■□□□□ 0.06
SFSWAP-204ENST00000535399 HIGD1CA8MV81 97 aa15.41■□□□□ 0.06
SFSWAP-204ENST00000535399 LINC01556Q5JQF7 62 aa15.41■□□□□ 0.06
SFSWAP-204ENST00000535399 TRAV9-2A0A087WT02 112 aa15.4■□□□□ 0.06
SFSWAP-204ENST00000535399 A0A087WWC5 75 aa15.4■□□□□ 0.06
SFSWAP-204ENST00000535399 K7EP13 123 aa15.4■□□□□ 0.06
SFSWAP-204ENST00000535399 A0A1B0GVY2 172 aa15.38■□□□□ 0.05
SFSWAP-204ENST00000535399 H7C1H1 209 aa15.38■□□□□ 0.05
SFSWAP-204ENST00000535399 A0A1B0GUT8 65 aa15.37■□□□□ 0.05
SFSWAP-204ENST00000535399 TNP2Q05952 138 aa15.37■□□□□ 0.05
SFSWAP-204ENST00000535399 NUP35Q8NFH5 326 aa15.37■□□□□ 0.05
SFSWAP-204ENST00000535399 BORCS7Q96B45 105 aa15.37■□□□□ 0.05
SFSWAP-204ENST00000535399 TNFRSF18Q9Y5U5 241 aa15.37■□□□□ 0.05
SFSWAP-204ENST00000535399 RASL11AQ6T310 242 aa15.36■□□□□ 0.05
SFSWAP-204ENST00000535399 Q6ZRN7 208 aaPredicted RBP15.36■□□□□ 0.05
SFSWAP-204ENST00000535399 SMIM15Q7Z3B0 74 aa15.36■□□□□ 0.05
SFSWAP-204ENST00000535399 C10orf126Q8N4M7 172 aa15.36■□□□□ 0.05
SFSWAP-204ENST00000535399 DNAJC30Q96LL9 226 aa15.36■□□□□ 0.05
SFSWAP-204ENST00000535399 SMIM27A0A1W2PRY6 76 aa15.35■□□□□ 0.05
SFSWAP-204ENST00000535399 Q8N3U1 123 aa15.35■□□□□ 0.05
SFSWAP-204ENST00000535399 IGHV3-30P01768 117 aa15.34■□□□□ 0.05
SFSWAP-204ENST00000535399 IGHV3-33P01772 117 aa15.34■□□□□ 0.05
SFSWAP-204ENST00000535399 IGHV3-30-3P0DP02 117 aa15.34■□□□□ 0.05
SFSWAP-204ENST00000535399 IGHV3-30-5P0DP03 117 aa15.34■□□□□ 0.05
SFSWAP-204ENST00000535399 DAZ4Q86SG3 579 aaKnown RBP15.34■□□□□ 0.05
SFSWAP-204ENST00000535399 GATD1Q8NB37 220 aa15.34■□□□□ 0.05
SFSWAP-204ENST00000535399 DAZ3Q9NR90 486 aaKnown RBP15.34■□□□□ 0.05
SFSWAP-204ENST00000535399 NAT8BQ9UHF3 227 aa15.34■□□□□ 0.05
SFSWAP-204ENST00000535399 TRBV6-8A0A0A6YYG3 113 aa15.33■□□□□ 0.04
SFSWAP-204ENST00000535399 UQCC3Q6UW78 93 aa15.33■□□□□ 0.04
SFSWAP-204ENST00000535399 NIT2Q9NQR4 276 aa15.33■□□□□ 0.04
SFSWAP-204ENST00000535399 PKD1P98161 4303 aa15.33■□□□□ 0.04
SFSWAP-204ENST00000535399 DNAH11Q96DT5 4516 aa15.33■□□□□ 0.04
SFSWAP-204ENST00000535399 TRAV26-2A0A0B4J265 109 aa15.32■□□□□ 0.04
SFSWAP-204ENST00000535399 IBA57-AS1B1ANH7 110 aa15.32■□□□□ 0.04
SFSWAP-204ENST00000535399 RIGQ13278 110 aa15.32■□□□□ 0.04
SFSWAP-204ENST00000535399 NIT1Q86X76 327 aa15.32■□□□□ 0.04
SFSWAP-204ENST00000535399 PNRC1Q12796 327 aaPredicted RBP15.31■□□□□ 0.04
SFSWAP-204ENST00000535399 NTM-AS1Q6ZSK4 140 aa15.31■□□□□ 0.04
SFSWAP-204ENST00000535399 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.31■□□□□ 0.04
SFSWAP-204ENST00000535399 TMEM191AQ9H0A3 160 aa15.31■□□□□ 0.04
SFSWAP-204ENST00000535399 NFE4Q86UQ8 179 aa15.3■□□□□ 0.04
SFSWAP-204ENST00000535399 TMEM97Q5BJF2 176 aa15.29■□□□□ 0.04
SFSWAP-204ENST00000535399 FRZBQ92765 325 aa15.29■□□□□ 0.04
SFSWAP-204ENST00000535399 RNF185Q96GF1 192 aa15.29■□□□□ 0.04
SFSWAP-204ENST00000535399 TMEM218A2RU14 115 aa15.28■□□□□ 0.04
SFSWAP-204ENST00000535399 PKHD1P08F94 4074 aa15.28■□□□□ 0.04
SFSWAP-204ENST00000535399 PPP1R2P9O14990 202 aa15.27■□□□□ 0.04
SFSWAP-204ENST00000535399 ADCYAP1P18509 176 aa15.27■□□□□ 0.04
SFSWAP-204ENST00000535399 COMMD7Q86VX2 200 aa15.27■□□□□ 0.04
SFSWAP-204ENST00000535399 RPL39LQ96EH5 51 aaKnown RBP15.27■□□□□ 0.04
SFSWAP-204ENST00000535399 DYNC1H1Q14204 4646 aaKnown RBP15.26■□□□□ 0.03
SFSWAP-204ENST00000535399 RAB4AP20338 218 aa15.26■□□□□ 0.03
SFSWAP-204ENST00000535399 AMN1Q8IY45 258 aa15.26■□□□□ 0.03
SFSWAP-204ENST00000535399 CHCHD7Q9BUK0 85 aa15.26■□□□□ 0.03
SFSWAP-204ENST00000535399 LINC00862A6NCI5 91 aa15.25■□□□□ 0.03
SFSWAP-204ENST00000535399 GAS8-AS1O95177 125 aa15.25■□□□□ 0.03
SFSWAP-204ENST00000535399 LAGE3Q14657 143 aa15.25■□□□□ 0.03
SFSWAP-204ENST00000535399 IQCJQ1A5X6 159 aa15.25■□□□□ 0.03
SFSWAP-204ENST00000535399 URGCP-MRPS24S4R325 110 aa15.25■□□□□ 0.03
SFSWAP-204ENST00000535399 TRBV25-1A0A075B6N4 114 aa15.23■□□□□ 0.03
SFSWAP-204ENST00000535399 A0A087WX48 190 aa15.23■□□□□ 0.03
SFSWAP-204ENST00000535399 IGHV1-24A0A0C4DH33 117 aa15.23■□□□□ 0.03
SFSWAP-204ENST00000535399 MT-ND4LP03901 98 aa15.23■□□□□ 0.03
SFSWAP-204ENST00000535399 KCNIP4Q6PIL6 250 aa15.23■□□□□ 0.03
SFSWAP-204ENST00000535399 ANAPC16Q96DE5 110 aa15.23■□□□□ 0.03
SFSWAP-204ENST00000535399 CHCHD5Q9BSY4 110 aa15.23■□□□□ 0.03
SFSWAP-204ENST00000535399 Q9HAA7 133 aa15.23■□□□□ 0.03
SFSWAP-204ENST00000535399 A0A1B0GW15 77 aa15.22■□□□□ 0.03
SFSWAP-204ENST00000535399 A0A1B0GXF2 115 aa15.22■□□□□ 0.03
SFSWAP-204ENST00000535399 TMEM262E9PQX1 116 aa15.22■□□□□ 0.03
SFSWAP-204ENST00000535399 F8W036 122 aa15.22■□□□□ 0.03
SFSWAP-204ENST00000535399 MRAP2Q96G30 205 aa15.22■□□□□ 0.03
SFSWAP-204ENST00000535399 TRBV6-5A0A0K0K1A5 114 aa15.21■□□□□ 0.03
SFSWAP-204ENST00000535399 CAMPP49913 170 aa15.21■□□□□ 0.03
SFSWAP-204ENST00000535399 MPV17L2Q567V2 206 aa15.21■□□□□ 0.03
SFSWAP-204ENST00000535399 MRPL54Q6P161 138 aaKnown RBP15.21■□□□□ 0.03
SFSWAP-204ENST00000535399 DEFB104AQ8WTQ1 72 aa15.21■□□□□ 0.03
SFSWAP-204ENST00000535399 KLK12Q9UKR0 248 aa15.21■□□□□ 0.03
SFSWAP-204ENST00000535399 RPS10P46783 165 aaKnown RBP15.2■□□□□ 0.02
SFSWAP-204ENST00000535399 COTL1Q14019 142 aa15.2■□□□□ 0.02
SFSWAP-204ENST00000535399 FAM104BQ5XKR9 115 aa15.2■□□□□ 0.02
SFSWAP-204ENST00000535399 PKIAP61925 76 aa15.19■□□□□ 0.02
SFSWAP-204ENST00000535399 HBBP68871 147 aa15.19■□□□□ 0.02
SFSWAP-204ENST00000535399 GAGE6Q13070 117 aa15.19■□□□□ 0.02
SFSWAP-204ENST00000535399 TMEM243Q9BU79 118 aa15.19■□□□□ 0.02
SFSWAP-204ENST00000535399 SEC11CQ9BY50 192 aa15.19■□□□□ 0.02
SFSWAP-204ENST00000535399 TRAV8-3A0A0A6YYJ7 113 aa15.18■□□□□ 0.02
SFSWAP-204ENST00000535399 SDHAF1A6NFY7 115 aa15.18■□□□□ 0.02
SFSWAP-204ENST00000535399 SMKR1H3BMG3 65 aa15.18■□□□□ 0.02
SFSWAP-204ENST00000535399 ELOBQ15370 118 aa15.18■□□□□ 0.02
SFSWAP-204ENST00000535399 ATRAIDQ6UW56 229 aa15.18■□□□□ 0.02
SFSWAP-204ENST00000535399 NCR2O95944 276 aa15.17■□□□□ 0.02
SFSWAP-204ENST00000535399 MRPL51Q4U2R6 128 aaKnown RBP15.17■□□□□ 0.02
SFSWAP-204ENST00000535399 ATP5L2Q7Z4Y8 100 aa15.17■□□□□ 0.02
SFSWAP-204ENST00000535399 Q8N976 141 aa15.17■□□□□ 0.02
SFSWAP-204ENST00000535399 A0A087WTM6 91 aa15.16■□□□□ 0.02
SFSWAP-204ENST00000535399 S100A8P05109 93 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms