RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 NAT8BQ9UHF3 227 aa12.11□□□□□ -0.47
NXF1-206ENST00000527902 RTL8CO15255 209 aa12.1□□□□□ -0.47
NXF1-206ENST00000527902 BORCS7Q96B45 105 aa12.1□□□□□ -0.47
NXF1-206ENST00000527902 TRAV26-2A0A0B4J265 109 aa12.09□□□□□ -0.47
NXF1-206ENST00000527902 OR10J3Q5JRS4 329 aa12.09□□□□□ -0.47
NXF1-206ENST00000527902 IGHV3-38A0A0C4DH36 116 aa12.08□□□□□ -0.48
NXF1-206ENST00000527902 F8W036 122 aa12.08□□□□□ -0.48
NXF1-206ENST00000527902 DNAH10OSP0CZ25 163 aa12.08□□□□□ -0.48
NXF1-206ENST00000527902 GATD1Q8NB37 220 aa12.08□□□□□ -0.48
NXF1-206ENST00000527902 H7C1H1 209 aa12.07□□□□□ -0.48
NXF1-206ENST00000527902 TTC32Q5I0X7 151 aa12.07□□□□□ -0.48
NXF1-206ENST00000527902 RASL11AQ6T310 242 aa12.07□□□□□ -0.48
NXF1-206ENST00000527902 SMIM15Q7Z3B0 74 aa12.07□□□□□ -0.48
NXF1-206ENST00000527902 Q8N3U1 123 aa12.07□□□□□ -0.48
NXF1-206ENST00000527902 TMEM191AQ9H0A3 160 aa12.07□□□□□ -0.48
NXF1-206ENST00000527902 TRAV8-6A0A0B4J262 113 aa12.06□□□□□ -0.48
NXF1-206ENST00000527902 RIGQ13278 110 aa12.06□□□□□ -0.48
NXF1-206ENST00000527902 C1orf134Q5TEV5 83 aa12.06□□□□□ -0.48
NXF1-206ENST00000527902 RNF185Q96GF1 192 aa12.06□□□□□ -0.48
NXF1-206ENST00000527902 SEC11CQ9BY50 192 aa12.06□□□□□ -0.48
NXF1-206ENST00000527902 PPP1R2P9O14990 202 aa12.05□□□□□ -0.48
NXF1-206ENST00000527902 GAS8-AS1O95177 125 aa12.05□□□□□ -0.48
NXF1-206ENST00000527902 C6orf223Q8N319 242 aa12.05□□□□□ -0.48
NXF1-206ENST00000527902 RPL39LQ96EH5 51 aaKnown RBP12.05□□□□□ -0.48
NXF1-206ENST00000527902 DNAJC30Q96LL9 226 aa12.05□□□□□ -0.48
NXF1-206ENST00000527902 NIT2Q9NQR4 276 aa12.05□□□□□ -0.48
NXF1-206ENST00000527902 TNFRSF18Q9Y5U5 241 aa12.05□□□□□ -0.48
NXF1-206ENST00000527902 HECTD4Q9Y4D8 3996 aa12.04□□□□□ -0.48
NXF1-206ENST00000527902 A0A087WWC5 75 aa12.04□□□□□ -0.48
NXF1-206ENST00000527902 MT-ND4LP03901 98 aa12.04□□□□□ -0.48
NXF1-206ENST00000527902 LINC01556Q5JQF7 62 aa12.04□□□□□ -0.48
NXF1-206ENST00000527902 C10orf91Q5T1B1 145 aa12.04□□□□□ -0.48
NXF1-206ENST00000527902 NTM-AS1Q6ZSK4 140 aa12.04□□□□□ -0.48
NXF1-206ENST00000527902 AMN1Q8IY45 258 aa12.04□□□□□ -0.48
NXF1-206ENST00000527902 ANAPC16Q96DE5 110 aa12.04□□□□□ -0.48
NXF1-206ENST00000527902 A0A1B0GXF2 115 aa12.03□□□□□ -0.48
NXF1-206ENST00000527902 RAB4AP20338 218 aa12.03□□□□□ -0.48
NXF1-206ENST00000527902 CAMPP49913 170 aa12.03□□□□□ -0.48
NXF1-206ENST00000527902 MRPL54Q6P161 138 aaKnown RBP12.03□□□□□ -0.48
NXF1-206ENST00000527902 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
NXF1-206ENST00000527902 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
NXF1-206ENST00000527902 PKD1P98161 4303 aa12.03□□□□□ -0.48
NXF1-206ENST00000527902 TRBV6-8A0A0A6YYG3 113 aa12.02□□□□□ -0.49
NXF1-206ENST00000527902 IGHV3-30P01768 117 aa12.02□□□□□ -0.49
NXF1-206ENST00000527902 IGHV3-33P01772 117 aa12.02□□□□□ -0.49
NXF1-206ENST00000527902 IGHV3-30-3P0DP02 117 aa12.02□□□□□ -0.49
NXF1-206ENST00000527902 IGHV3-30-5P0DP03 117 aa12.02□□□□□ -0.49
NXF1-206ENST00000527902 DEFB104AQ8WTQ1 72 aa12.01□□□□□ -0.49
NXF1-206ENST00000527902 CARHSP1Q9Y2V2 147 aaKnown RBP12.01□□□□□ -0.49
NXF1-206ENST00000527902 DNAH11Q96DT5 4516 aa12.01□□□□□ -0.49
NXF1-206ENST00000527902 RPS10P46783 165 aaKnown RBP12□□□□□ -0.49
NXF1-206ENST00000527902 NIT1Q86X76 327 aa12□□□□□ -0.49
NXF1-206ENST00000527902 FRZBQ92765 325 aa12□□□□□ -0.49
NXF1-206ENST00000527902 TRAV9-2A0A087WT02 112 aa11.99□□□□□ -0.49
NXF1-206ENST00000527902 A0A1B0GW15 77 aa11.99□□□□□ -0.49
NXF1-206ENST00000527902 PRSS29PA6NIE9 313 aa11.99□□□□□ -0.49
NXF1-206ENST00000527902 SMKR1H3BMG3 65 aa11.99□□□□□ -0.49
NXF1-206ENST00000527902 NCR2O95944 276 aa11.99□□□□□ -0.49
NXF1-206ENST00000527902 HBBP68871 147 aa11.99□□□□□ -0.49
NXF1-206ENST00000527902 FAM104BQ5XKR9 115 aa11.99□□□□□ -0.49
NXF1-206ENST00000527902 Q6ZRN7 208 aaPredicted RBP11.99□□□□□ -0.49
NXF1-206ENST00000527902 LINC00336Q6ZUF6 198 aa11.99□□□□□ -0.49
NXF1-206ENST00000527902 K7EP13 123 aa11.98□□□□□ -0.49
NXF1-206ENST00000527902 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.98□□□□□ -0.49
NXF1-206ENST00000527902 MRAP2Q96G30 205 aa11.98□□□□□ -0.49
NXF1-206ENST00000527902 TRBV6-5A0A0K0K1A5 114 aa11.97□□□□□ -0.49
NXF1-206ENST00000527902 IBA57-AS1B1ANH7 110 aa11.97□□□□□ -0.49
NXF1-206ENST00000527902 BTF3P20290 206 aaKnown RBP11.97□□□□□ -0.49
NXF1-206ENST00000527902 TNP2Q05952 138 aa11.97□□□□□ -0.49
NXF1-206ENST00000527902 MRPL51Q4U2R6 128 aaKnown RBP11.97□□□□□ -0.49
NXF1-206ENST00000527902 ATP5L2Q7Z4Y8 100 aa11.97□□□□□ -0.49
NXF1-206ENST00000527902 C10orf126Q8N4M7 172 aa11.97□□□□□ -0.49
NXF1-206ENST00000527902 A0A1B0GVY2 172 aa11.96□□□□□ -0.49
NXF1-206ENST00000527902 SDHAF1A6NFY7 115 aa11.96□□□□□ -0.49
NXF1-206ENST00000527902 IQCJQ1A5X6 159 aa11.96□□□□□ -0.49
NXF1-206ENST00000527902 TMEM97Q5BJF2 176 aa11.96□□□□□ -0.49
NXF1-206ENST00000527902 NRACQ8N912 160 aa11.96□□□□□ -0.49
NXF1-206ENST00000527902 PKHD1P08F94 4074 aa11.95□□□□□ -0.5
NXF1-206ENST00000527902 TRBV25-1A0A075B6N4 114 aa11.95□□□□□ -0.5
NXF1-206ENST00000527902 C7orf77A4D0Y5 90 aa11.95□□□□□ -0.5
NXF1-206ENST00000527902 MPV17L2Q567V2 206 aa11.95□□□□□ -0.5
NXF1-206ENST00000527902 CLRN3Q8NCR9 226 aa11.95□□□□□ -0.5
NXF1-206ENST00000527902 CHCHD5Q9BSY4 110 aa11.95□□□□□ -0.5
NXF1-206ENST00000527902 CTDSP1Q9GZU7 261 aa11.95□□□□□ -0.5
NXF1-206ENST00000527902 IGHV1-24A0A0C4DH33 117 aa11.94□□□□□ -0.5
NXF1-206ENST00000527902 S100A8P05109 93 aa11.94□□□□□ -0.5
NXF1-206ENST00000527902 IMMP2LQ96T52 175 aa11.94□□□□□ -0.5
NXF1-206ENST00000527902 GAGE6Q13070 117 aa11.93□□□□□ -0.5
NXF1-206ENST00000527902 COTL1Q14019 142 aa11.93□□□□□ -0.5
NXF1-206ENST00000527902 KCNIP4Q6PIL6 250 aa11.93□□□□□ -0.5
NXF1-206ENST00000527902 BTF3L4Q96K17 158 aa11.93□□□□□ -0.5
NXF1-206ENST00000527902 TMEM70Q9BUB7 260 aa11.93□□□□□ -0.5
NXF1-206ENST00000527902 Q9HAA7 133 aa11.93□□□□□ -0.5
NXF1-206ENST00000527902 ST20Q9HBF5 79 aa11.93□□□□□ -0.5
NXF1-206ENST00000527902 URGCP-MRPS24S4R325 110 aa11.93□□□□□ -0.5
NXF1-206ENST00000527902 BIRC6Q9NR09 4857 aa11.92□□□□□ -0.5
NXF1-206ENST00000527902 A0A087WX48 190 aa11.92□□□□□ -0.5
NXF1-206ENST00000527902 TMEM262E9PQX1 116 aa11.92□□□□□ -0.5
NXF1-206ENST00000527902 POLR2KP53803 58 aaKnown RBP11.92□□□□□ -0.5
NXF1-206ENST00000527902 LAGE3Q14657 143 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms