RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 FBN3Q75N90 2809 aa5.65□□□□□ -1.51
HDAC3-216ENST00000523088 TRAV8-3A0A0A6YYJ7 113 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 IGHV3OR16-9A0A0B4J2B5 98 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 LST1O00453 97 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 NPPCP23582 126 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 GNB1P62873 340 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 UBE2BP63146 152 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 CXCL6P80162 114 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 LINC00596Q86U02 117 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 SPTSSAQ969W0 71 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 SPACA5Q96QH8 159 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 ANK2Q01484 3957 aa5.64□□□□□ -1.51
HDAC3-216ENST00000523088 A8MUN3 132 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 IQCF6A8MYZ5 107 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 H0Y9J4 135 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 MGST1P10620 155 aaKnown RBP5.63□□□□□ -1.51
HDAC3-216ENST00000523088 CKS2P33552 79 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 CACNG7P62955 275 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 ATXN8Q156A1 80 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 Q75L30 129 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 NOTCH2NLQ7Z3S9 236 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 SLC25A29Q8N8R3 303 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 CCL13Q99616 98 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 Q9HAA7 133 aa5.63□□□□□ -1.51
HDAC3-216ENST00000523088 IGLV1-36A0A0B4J1U3 117 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 TRAV3A0A0B4J244 114 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 KLLNB2CW77 178 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 TMEM256-PLSCR3K7ERE1 68 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 ZNF80P51504 273 aaPredicted RBP5.62□□□□□ -1.51
HDAC3-216ENST00000523088 SUMO2P61956 95 aaKnown RBP5.62□□□□□ -1.51
HDAC3-216ENST00000523088 KIAA0087Q14695 138 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 KRTAP27-1Q3LI81 207 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 TIMM17AQ99595 171 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 OPRPNQ99935 248 aaPredicted RBP5.62□□□□□ -1.51
HDAC3-216ENST00000523088 SLC50A1Q9BRV3 221 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 PLA2G12AQ9BZM1 189 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 Q9H3A6 140 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 C7orf69Q9H7B7 122 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 TAS2R4Q9NYW5 299 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 LHFPL6Q9Y693 200 aa5.62□□□□□ -1.51
HDAC3-216ENST00000523088 LOC107984156A0A0G2JMH3 177 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 ARHGAP32A7KAX9 2087 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 H3BVH4 76 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 M0R135 149 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 M0R381 172 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 PEX7O00628 323 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 WNT9BO14905 357 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 RNASE2P10153 161 aaKnown RBP5.61□□□□□ -1.51
HDAC3-216ENST00000523088 MP68P56378 58 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 KLKP1Q107X0 134 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 ZNF876PQ49A33 203 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 RUSC1-AS1Q66K80 236 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 ARL17AQ8IVW1 177 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 CD177Q8N6Q3 437 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 ITLN1Q8WWA0 313 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 HIST1H4GQ99525 98 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 CYSTM1Q9H1C7 97 aa5.61□□□□□ -1.51
HDAC3-216ENST00000523088 NXPH4O95158 308 aa5.6□□□□□ -1.51
HDAC3-216ENST00000523088 FSHBP01225 129 aa5.6□□□□□ -1.51
HDAC3-216ENST00000523088 PLA2G1BP04054 148 aaKnown RBP5.6□□□□□ -1.51
HDAC3-216ENST00000523088 FHL2Q14192 279 aa5.6□□□□□ -1.51
HDAC3-216ENST00000523088 Q1T7F1 81 aa5.6□□□□□ -1.51
HDAC3-216ENST00000523088 ZNF497Q6ZNH5 498 aa5.6□□□□□ -1.51
HDAC3-216ENST00000523088 Q6ZR03 302 aa5.6□□□□□ -1.51
HDAC3-216ENST00000523088 DAND5Q8N907 189 aa5.6□□□□□ -1.51
HDAC3-216ENST00000523088 FXYD5Q96DB9 178 aa5.6□□□□□ -1.51
HDAC3-216ENST00000523088 SLC25A22Q9H936 323 aa5.6□□□□□ -1.51
HDAC3-216ENST00000523088 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-216ENST00000523088 TRAV13-2A0A0B4J235 113 aa5.59□□□□□ -1.51
HDAC3-216ENST00000523088 LINC01549A6NIU2 74 aa5.59□□□□□ -1.51
HDAC3-216ENST00000523088 H7BZZ5 65 aa5.59□□□□□ -1.51
HDAC3-216ENST00000523088 IFI27P40305 119 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-216ENST00000523088 SS18Q15532 418 aa5.59□□□□□ -1.51
HDAC3-216ENST00000523088 Q6ZRM9 215 aa5.59□□□□□ -1.51
HDAC3-216ENST00000523088 LINC00173Q6ZV60 143 aa5.59□□□□□ -1.51
HDAC3-216ENST00000523088 FAM19A3Q7Z5A8 133 aa5.59□□□□□ -1.51
HDAC3-216ENST00000523088 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.59□□□□□ -1.51
HDAC3-216ENST00000523088 DEFB108BQ8NET1 73 aa5.59□□□□□ -1.51
HDAC3-216ENST00000523088 TRBV7-1A0A0A6YYK4 115 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 XCL1P47992 114 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 PRR3P79522 188 aaKnown RBP5.58□□□□□ -1.52
HDAC3-216ENST00000523088 Q6JHZ5 121 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 ATP11AUNQ6ZP68 121 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 C1orf229Q6ZS94 237 aaPredicted RBP5.58□□□□□ -1.52
HDAC3-216ENST00000523088 C7orf65Q6ZTY9 151 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 NKAPP1Q8N9T2 125 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 DIRC1Q969H9 104 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 ZNF414Q96IQ9 312 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 ZNF714Q96N38 554 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 PRR25Q96S07 402 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 ESM1Q9NQ30 184 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 MRPL35Q9NZE8 188 aaKnown RBP5.58□□□□□ -1.52
HDAC3-216ENST00000523088 XCL2Q9UBD3 114 aa5.58□□□□□ -1.52
HDAC3-216ENST00000523088 TMSB15BA0A087X1C1 80 aa5.57□□□□□ -1.52
HDAC3-216ENST00000523088 LOC100131303A0A0U1RQF7 123 aa5.57□□□□□ -1.52
HDAC3-216ENST00000523088 RBMY1BA6NDE4 496 aaKnown RBP5.57□□□□□ -1.52
HDAC3-216ENST00000523088 RBMY1EA6NEQ0 496 aaKnown RBP5.57□□□□□ -1.52
HDAC3-216ENST00000523088 COX7A2LO14548 114 aa5.57□□□□□ -1.52
HDAC3-216ENST00000523088 RNASE1P07998 156 aaKnown RBP5.57□□□□□ -1.52
HDAC3-216ENST00000523088 RBMY1DP0C7P1 496 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms