RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 PRO3102Q9H379 93 aa1.53□□□□□ -2.16
SQLE-204ENST00000520493 NOP16Q9Y3C1 178 aaKnown RBP1.53□□□□□ -2.16
SQLE-204ENST00000520493 WDFY3Q8IZQ1 3526 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 PHLPP1O60346 1717 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 SUPT6HQ7KZ85 1726 aaKnown RBP1.52□□□□□ -2.17
SQLE-204ENST00000520493 ABCA5Q8WWZ7 1642 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 SAMD9Q5K651 1589 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 KIAA0586Q9BVV6 1533 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 NCOA2Q15596 1464 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 IFT140Q96RY7 1462 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 J3QLW9 94 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 DNAL4O96015 105 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 PPYP01298 95 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 IGF2P01344 180 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 IGHV3-30P01768 117 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 IGHV3-30-5P0DP03 117 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 PYYP10082 97 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 RHOHQ15669 191 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 SPRNQ5BIV9 151 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 SLC25A26Q70HW3 274 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 SNX29P2Q8IUI4 249 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 PLPP5Q8NEB5 264 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 ZFP30Q9Y2G7 519 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 NBPF19A0A087WUL8 3843 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 FOCADQ5VW36 1801 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 MYO15AQ9UKN7 3530 aa1.52□□□□□ -2.17
SQLE-204ENST00000520493 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
SQLE-204ENST00000520493 KIAA0556O60303 1618 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 TARBP1Q13395 1621 aaKnown RBP1.51□□□□□ -2.17
SQLE-204ENST00000520493 PTPN23Q9H3S7 1636 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 IQGAP2Q13576 1575 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 EPRSP07814 1512 aaKnown RBP1.51□□□□□ -2.17
SQLE-204ENST00000520493 EFCAB6Q5THR3 1501 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 UGGT2Q9NYU1 1516 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 NAIPQ13075 1403 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 TENM3Q9P273 2699 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 MYH7P12883 1935 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 A0A0G2JMM0 328 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 A0A1B0GV90 55 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 DLEU1O43261 78 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 GNG7O60262 68 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 KRTAP20-1Q3LI63 56 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 LINC01545Q5VT33 79 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 PPDPFLQ8WWR9 84 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 C2orf88Q9BSF0 95 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 FREM2Q5SZK8 3169 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 NALCNQ8IZF0 1738 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 KIF21AQ7Z4S6 1674 aa1.51□□□□□ -2.17
SQLE-204ENST00000520493 CASP8AP2Q9UKL3 1982 aa1.5□□□□□ -2.17
SQLE-204ENST00000520493 IBTKQ9P2D0 1353 aaPredicted RBP1.5□□□□□ -2.17
SQLE-204ENST00000520493 IGKV2-29A2NJV5 120 aaPredicted RBP1.5□□□□□ -2.17
SQLE-204ENST00000520493 FAM25AB3EWG3 89 aa1.5□□□□□ -2.17
SQLE-204ENST00000520493 FAM25CB3EWG5 89 aa1.5□□□□□ -2.17
SQLE-204ENST00000520493 FAM25GB3EWG6 89 aa1.5□□□□□ -2.17
SQLE-204ENST00000520493 PDE6GP18545 87 aa1.5□□□□□ -2.17
SQLE-204ENST00000520493 Q6ZUT4 128 aa1.5□□□□□ -2.17
SQLE-204ENST00000520493 VSTM2AQ8TAG5 236 aa1.5□□□□□ -2.17
SQLE-204ENST00000520493 DYNLRB2Q8TF09 96 aa1.5□□□□□ -2.17
SQLE-204ENST00000520493 OBSCN-AS1Q96MR7 158 aa1.5□□□□□ -2.17
SQLE-204ENST00000520493 ADAMTS12P58397 1594 aa1.5□□□□□ -2.17
SQLE-204ENST00000520493 MAGI1Q96QZ7 1491 aaPredicted RBP1.5□□□□□ -2.17
SQLE-204ENST00000520493 ABCC5O15440 1437 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 DAPK1P53355 1430 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 TROQ12816 1431 aaPredicted RBP1.49□□□□□ -2.17
SQLE-204ENST00000520493 SMG6Q86US8 1419 aaKnown RBP1.49□□□□□ -2.17
SQLE-204ENST00000520493 ROCK2O75116 1388 aaKnown RBP1.49□□□□□ -2.17
SQLE-204ENST00000520493 MYH9P35579 1960 aaKnown RBP1.49□□□□□ -2.17
SQLE-204ENST00000520493 AKAP11Q9UKA4 1901 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 TMEM30CPA0ZSE6 113 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 PITX3O75364 302 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 KLF7O75840 302 aaPredicted RBP1.49□□□□□ -2.17
SQLE-204ENST00000520493 IGLV3-1P01715 115 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 APODP05090 189 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 GYPBP06028 91 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 SPATA45Q537H7 98 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 C22orf24Q9Y442 160 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 NRKQ7Z2Y5 1582 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 PLXNA2O75051 1894 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 MAGI3Q5TCQ9 1506 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 DMXL1Q9Y485 3027 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 LRRIQ1Q96JM4 1722 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 CNTLNQ9NXG0 1405 aa1.49□□□□□ -2.17
SQLE-204ENST00000520493 GCC2Q8IWJ2 1684 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 RIF1Q5UIP0 2472 aaKnown RBP1.48□□□□□ -2.17
SQLE-204ENST00000520493 KTN1Q86UP2 1357 aaKnown RBP1.48□□□□□ -2.17
SQLE-204ENST00000520493 ITPR2Q14571 2701 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 FAM186AA6NE01 2351 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 NIPBLQ6KC79 2804 aaeCLIP1.48□□□□□ -2.17
SQLE-204ENST00000520493 TRAV12-2A0A075B6T6 113 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 NUPR2A6NF83 97 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 LINC00587B1AMM8 73 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 M0R129 80 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 POLR2JP52435 117 aaKnown RBP1.48□□□□□ -2.17
SQLE-204ENST00000520493 CSAG1Q6PB30 78 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 KCNRGQ8N5I3 272 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 C10orf105Q8TEF2 133 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 DPH3Q96FX2 82 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 LIMD2Q9BT23 127 aa1.48□□□□□ -2.17
SQLE-204ENST00000520493 PSMG3Q9BT73 122 aaPredicted RBP1.48□□□□□ -2.17
SQLE-204ENST00000520493 WFDC10AQ9H1F0 79 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms