RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 MPC2O95563 127 aa1.1□□□□□ -2.23
SCARNA3-201ENST00000517097 RPL37AP61513 92 aaKnown RBP1.1□□□□□ -2.23
SCARNA3-201ENST00000517097 SBSPONQ8IVN8 264 aa1.1□□□□□ -2.23
SCARNA3-201ENST00000517097 SPTSSBQ8NFR3 76 aa1.1□□□□□ -2.23
SCARNA3-201ENST00000517097 OBSCN-AS1Q96MR7 158 aa1.1□□□□□ -2.23
SCARNA3-201ENST00000517097 CYSTM1Q9H1C7 97 aa1.1□□□□□ -2.23
SCARNA3-201ENST00000517097 MYH4Q9Y623 1939 aa1.1□□□□□ -2.23
SCARNA3-201ENST00000517097 SORL1Q92673 2214 aa1.09□□□□□ -2.23
SCARNA3-201ENST00000517097 MYO7BQ6PIF6 2116 aa1.09□□□□□ -2.23
SCARNA3-201ENST00000517097 TRAV13-2A0A0B4J235 113 aa1.09□□□□□ -2.23
SCARNA3-201ENST00000517097 LOC101927531A0A1B0GV80 90 aa1.09□□□□□ -2.23
SCARNA3-201ENST00000517097 TMEM262E9PQX1 116 aa1.09□□□□□ -2.23
SCARNA3-201ENST00000517097 SNHG12Q9BXW3 62 aa1.09□□□□□ -2.23
SCARNA3-201ENST00000517097 DPH3P1Q9H4G8 78 aa1.09□□□□□ -2.23
SCARNA3-201ENST00000517097 WNK3Q9BYP7 1800 aa1.09□□□□□ -2.23
SCARNA3-201ENST00000517097 RAPGEF2Q9Y4G8 1499 aa1.09□□□□□ -2.24
SCARNA3-201ENST00000517097 ABCA1O95477 2261 aa1.09□□□□□ -2.24
SCARNA3-201ENST00000517097 TECTAO75443 2155 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 C10orf71Q711Q0 1435 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 CACNA1BQ00975 2339 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 UBE2L5PA0A1B0GUS4 154 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 RBAKDNA6NC62 111 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 HCG22E2RYF7 251 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 ATP5EP56381 51 aaPredicted RBP1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 FXYD4P59646 89 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 UBE2L3P68036 154 aaKnown RBP1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 CCL8P80075 99 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 DCDP81605 110 aaKnown RBP1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 PP632Q6XCG6 107 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 CYP2G1PQ6ZSU1 146 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 COMMD6Q7Z4G1 85 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 DEFB132Q7Z7B7 95 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 AMELYQ99218 206 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 PPLO60437 1756 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 BTAF1O14981 1849 aa1.08□□□□□ -2.24
SCARNA3-201ENST00000517097 LRRC37A3O60309 1634 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 CASKIN1Q8WXD9 1431 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 FYCO1Q9BQS8 1478 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 IGKV2-40A0A087WW87 121 aaPredicted RBP1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 NBDYA0A0U1RRE5 68 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 TEX49A0A1B0GTD5 131 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 IGKV2-29A2NJV5 120 aaPredicted RBP1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 SSSCA1O60232 199 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 IGKV2D-40P01614 121 aaPredicted RBP1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 UBE2D1P51668 147 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 GNG2P59768 71 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 FXYD3Q14802 87 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 COL5A1-AS1Q5SY13 56 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 ZNF818PQ6ZRF7 136 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 BAZ1AQ9NRL2 1556 aaPredicted RBP1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 LAMC3Q9Y6N6 1575 aa1.07□□□□□ -2.24
SCARNA3-201ENST00000517097 BLMP54132 1417 aaPredicted RBP1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 TROQ12816 1431 aaPredicted RBP1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 SCAPERQ9BY12 1400 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 MON2Q7Z3U7 1717 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 GAPVD1Q14C86 1478 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 TEX14Q8IWB6 1497 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 FLG2Q5D862 2391 aaPredicted RBP1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 LAMA4Q16363 1823 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 ZNF236Q9UL36 1845 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 MYO7AQ13402 2215 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 H3BQ15 152 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 SIX6O95475 246 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 SNCAP37840 140 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 XAF1Q6GPH4 301 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 C4orf33Q8N1A6 199 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 C20orf197Q8N268 126 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 C5orf56Q8N8D9 126 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 KDM5AP29375 1690 aaKnown RBP1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 PPIP5K1Q6PFW1 1433 aa1.06□□□□□ -2.24
SCARNA3-201ENST00000517097 ADGRL2O95490 1459 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 TOP2BQ02880 1626 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 LCE1CQ5T751 118 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 LCE1BQ5T7P3 118 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 MYOZ3Q8TDC0 251 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 LINC00208Q96KT6 92 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 LINC00474Q9P2X8 69 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 AP4S1Q9Y587 144 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 LINC00312Q9Y6C7 94 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 IFT172Q9UG01 1749 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 MARF1Q9Y4F3 1742 aaKnown RBP1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 ABCC5O15440 1437 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 SHANK2Q9UPX8 1470 aa1.05□□□□□ -2.24
SCARNA3-201ENST00000517097 F5P12259 2224 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 CLTCQ00610 1675 aaKnown RBP1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 PVALEFA0A1B0GWK0 134 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 CLPSL1A2RUU4 121 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 MT-ATP8P03928 68 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 CCL3L1P16619 93 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 UBA52P62987 128 aaKnown RBP1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 SSBP1Q04837 148 aaKnown RBP1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 Q6ZQY7 126 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 KRTAP13-1Q8IUC0 172 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 DPY30Q9C005 99 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 CYP4F30PQ9H0H9 118 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 PXDNQ92626 1479 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 MAGI1Q96QZ7 1491 aaPredicted RBP1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 CACNA1CQ13936 2221 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 SCN7AQ01118 1682 aa1.04□□□□□ -2.24
SCARNA3-201ENST00000517097 UBR1Q8IWV7 1749 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms