RNA–Protein interactions for RNA: ENST00000516699.1

RNU4ATAC3P-201, Transcript of RNA, U4atac small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU4ATAC3P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC3P-201ENST00000516699 GAGE2DQ9UEU5 116 aa2.51□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 NDUFA12Q9UI09 145 aa2.51□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 VPREB3Q9UKI3 123 aa2.51□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 CSDC2Q9Y534 153 aaKnown RBP2.51□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 ICOSQ9Y6W8 199 aa2.51□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 CEP250Q9BV73 2442 aa2.51□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 PTPRZ1P23471 2315 aaPredicted RBP2.51□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 CFAP54Q96N23 3096 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 FRYLO94915 3013 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 MYO15AQ9UKN7 3530 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 PTPRQQ9UMZ3 2332 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 IGKV3-7A0A075B6H7 116 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 IGLV5-45A0A087WSX0 123 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TRAV26-1A0A087WT03 109 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TRAV4A0A0B4J268 109 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 LINC01548A6NM66 108 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 F6UB75 175 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 NDUFA1O15239 70 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TRBV12-3P01733 135 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 IGHV3-53P01767 116 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TIRAPP58753 221 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 RPL39P62891 51 aaKnown RBP2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 DAZ2Q13117 558 aaKnown RBP2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 LY6EQ16553 131 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 SPINK13Q1W4C9 94 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 FAM222AQ5U5X8 452 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 C2orf82Q6UX34 121 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 FAM19A3Q7Z5A8 133 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 DAZ4Q86SG3 579 aaKnown RBP2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 KLHL30-AS1Q8NEE0 82 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 ZNRF2Q8NHG8 242 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 DYNLRB2Q8TF09 96 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 C4orf3Q8WVX3 66 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 VSIG2Q96IQ7 327 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 DUX3Q96PT4 197 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 CDIP1Q9H305 208 aa2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 DAZ3Q9NR90 486 aaKnown RBP2.5□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 MAP1BP46821 2468 aaKnown RBP2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 EP300Q09472 2414 aaPredicted RBP2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 PRRC2AP48634 2157 aaKnown RBP2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TRAV13-2A0A0B4J235 113 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 IGHV4-61A0A0C4DH41 118 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 LST1O00453 97 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TRACP01848 142 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 PRSS2P07478 247 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 IGHV4-38-2P0DP08 117 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 PRB4P10163 310 aaPredicted RBP2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 HOXD3P31249 432 aaPredicted RBP2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 XGP55808 180 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 SYNJ2BPP57105 145 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TSPEAR-AS2P59090 65 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 RPL36AP83881 106 aaKnown RBP2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 GAGE5Q13069 117 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 GAGE6Q13070 117 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 BEAN1Q3B7T3 259 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 MUSTN1Q8IVN3 82 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TMEM61Q8N0U2 210 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TMEM86BQ8N661 226 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 RPL36ALQ969Q0 106 aaKnown RBP2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 CITED1Q99966 193 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 LINC00527Q9UJ94 153 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 UBE2D4Q9Y2X8 147 aa2.49□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 SPTBN2O15020 2390 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 IGHV4-30-2A0A087WSY4 118 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 A0A0J9YXV3 536 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 A0A1W2PPR1 153 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 GAGE12JA6NER3 117 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 H7C2G1 150 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 COX7A2LO14548 114 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 UBE2L6O14933 153 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TRIAP1O43715 76 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 GAGE7O76087 117 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 DNAL4O96015 105 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 CRPP02741 224 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 GAGE12FP0CL80 117 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 GAGE12GP0CL81 117 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 GAGE12IP0CL82 117 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 CXCL5P42830 114 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 SMCPP49901 116 aaPredicted RBP2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 EMP1P54849 157 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 NDUFV3P56181 108 aaKnown RBP2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 BLCAPP62952 87 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 GAGE4Q13068 117 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 CDSNQ15517 529 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 DEFB121Q5J5C9 76 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 MEIG1Q5JSS6 88 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 Q6ZS46 218 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 STHQ8IWL8 128 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 LRRC75A-AS1Q8N1F1 130 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 Q8N2B8 174 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 DAND5Q8N907 189 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 SVIPQ8NHG7 77 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 NTN5Q8WTR8 489 aaPredicted RBP2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 FAM110AQ9BQ89 295 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 TMEM126AQ9H061 195 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 BEX4Q9NWD9 120 aaPredicted RBP2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 COL6A6A6NMZ7 2263 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 PIEZO2Q9H5I5 2752 aa2.48□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 FRYQ5TBA9 3013 aa2.47□□□□□ -2.01
RNU4ATAC3P-201ENST00000516699 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms